RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 H1FX-AS1Q4G0G2 97 aa1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 AKAP6Q13023 2319 aa1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 DCHS2Q6V1P9 2916 aa1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 NBPF19A0A087WUL8 3843 aa1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 C2CD3Q4AC94 2353 aa1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 DNAH1Q9P2D7 4330 aa1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 BOD1L1Q8NFC6 3051 aa1.46□□□□□ -2.18
HMGB3P15-201ENST00000507326 IGF2RP11717 2491 aa1.46□□□□□ -2.18
HMGB3P15-201ENST00000507326 MAP1BP46821 2468 aaKnown RBP1.46□□□□□ -2.18
HMGB3P15-201ENST00000507326 IGLV5-48A0A075B6I7 105 aa1.46□□□□□ -2.18
HMGB3P15-201ENST00000507326 SPRR1AP35321 89 aa1.46□□□□□ -2.18
HMGB3P15-201ENST00000507326 RP1L1Q8IWN7 2480 aaPredicted RBP1.46□□□□□ -2.18
HMGB3P15-201ENST00000507326 NBASA2RRP1 2371 aa1.45□□□□□ -2.18
HMGB3P15-201ENST00000507326 DMXL2Q8TDJ6 3036 aa1.45□□□□□ -2.18
HMGB3P15-201ENST00000507326 NBEAQ8NFP9 2946 aa1.45□□□□□ -2.18
HMGB3P15-201ENST00000507326 Q6ZSA8 131 aa1.45□□□□□ -2.18
HMGB3P15-201ENST00000507326 PIEZO2Q9H5I5 2752 aa1.45□□□□□ -2.18
HMGB3P15-201ENST00000507326 SPTA1P02549 2419 aa1.45□□□□□ -2.18
HMGB3P15-201ENST00000507326 SPTAN1Q13813 2472 aaKnown RBP1.44□□□□□ -2.18
HMGB3P15-201ENST00000507326 DOPEY1Q5JWR5 2465 aa1.44□□□□□ -2.18
HMGB3P15-201ENST00000507326 CSPG4Q6UVK1 2322 aa1.44□□□□□ -2.18
HMGB3P15-201ENST00000507326 DEFB130BP0DP73 79 aa1.44□□□□□ -2.18
HMGB3P15-201ENST00000507326 DEFB130AP0DP74 79 aa1.44□□□□□ -2.18
HMGB3P15-201ENST00000507326 POLR2KP53803 58 aaKnown RBP1.44□□□□□ -2.18
HMGB3P15-201ENST00000507326 DEFB1P60022 68 aa1.44□□□□□ -2.18
HMGB3P15-201ENST00000507326 CACNA1AO00555 2505 aa1.44□□□□□ -2.18
HMGB3P15-201ENST00000507326 DNAH3Q8TD57 4116 aa1.44□□□□□ -2.18
HMGB3P15-201ENST00000507326 KALRNO60229 2985 aa1.44□□□□□ -2.18
HMGB3P15-201ENST00000507326 SPRR1BP22528 89 aa1.43□□□□□ -2.18
HMGB3P15-201ENST00000507326 RPL39LQ96EH5 51 aaKnown RBP1.43□□□□□ -2.18
HMGB3P15-201ENST00000507326 NOP10Q9NPE3 64 aaKnown RBP1.43□□□□□ -2.18
HMGB3P15-201ENST00000507326 CMYA5Q8N3K9 4069 aa1.43□□□□□ -2.18
HMGB3P15-201ENST00000507326 CUBNO60494 3623 aa1.43□□□□□ -2.18
HMGB3P15-201ENST00000507326 CSMD2Q7Z408 3487 aa1.43□□□□□ -2.18
HMGB3P15-201ENST00000507326 ANK2Q01484 3957 aa1.42□□□□□ -2.18
HMGB3P15-201ENST00000507326 PKD1L2Q7Z442 2459 aa1.42□□□□□ -2.18
HMGB3P15-201ENST00000507326 ZNF462Q96JM2 2506 aa1.41□□□□□ -2.18
HMGB3P15-201ENST00000507326 FBN2P35556 2912 aa1.41□□□□□ -2.18
HMGB3P15-201ENST00000507326 M0QY20 66 aa1.41□□□□□ -2.18
HMGB3P15-201ENST00000507326 USP9XQ93008 2570 aaPredicted RBP1.41□□□□□ -2.18
HMGB3P15-201ENST00000507326 H3BUX3 64 aa1.4□□□□□ -2.19
HMGB3P15-201ENST00000507326 RPL39P62891 51 aaKnown RBP1.4□□□□□ -2.19
HMGB3P15-201ENST00000507326 CEP295Q9C0D2 2601 aa1.4□□□□□ -2.19
HMGB3P15-201ENST00000507326 NCOR2Q9Y618 2525 aa1.4□□□□□ -2.19
HMGB3P15-201ENST00000507326 HUWE1Q7Z6Z7 4374 aaKnown RBP1.39□□□□□ -2.19
HMGB3P15-201ENST00000507326 RHPN1-AS1Q9BWJ2 59 aa1.39□□□□□ -2.19
HMGB3P15-201ENST00000507326 USP24Q9UPU5 2620 aa1.39□□□□□ -2.19
HMGB3P15-201ENST00000507326 PIEZO1Q92508 2521 aa1.39□□□□□ -2.19
HMGB3P15-201ENST00000507326 PRRC2CQ9Y520 2896 aaKnown RBP1.39□□□□□ -2.19
HMGB3P15-201ENST00000507326 CREBBPQ92793 2442 aa1.39□□□□□ -2.19
HMGB3P15-201ENST00000507326 CELSR1Q9NYQ6 3014 aa1.39□□□□□ -2.19
HMGB3P15-201ENST00000507326 USP9YO00507 2555 aaPredicted RBP1.39□□□□□ -2.19
HMGB3P15-201ENST00000507326 PTPN13Q12923 2485 aa1.39□□□□□ -2.19
HMGB3P15-201ENST00000507326 DYNC2H1Q8NCM8 4307 aaKnown RBP1.38□□□□□ -2.19
HMGB3P15-201ENST00000507326 SPTBN4Q9H254 2564 aa1.38□□□□□ -2.19
HMGB3P15-201ENST00000507326 KRTAP12-4P60329 112 aa1.38□□□□□ -2.19
HMGB3P15-201ENST00000507326 PRLHP81277 87 aa1.38□□□□□ -2.19
HMGB3P15-201ENST00000507326 SPG11Q96JI7 2443 aa1.38□□□□□ -2.19
HMGB3P15-201ENST00000507326 WNK1Q9H4A3 2382 aa1.37□□□□□ -2.19
HMGB3P15-201ENST00000507326 LRBAP50851 2863 aa1.37□□□□□ -2.19
HMGB3P15-201ENST00000507326 NAV2Q8IVL1 2488 aa1.37□□□□□ -2.19
HMGB3P15-201ENST00000507326 CRCT1Q9UGL9 99 aa1.37□□□□□ -2.19
HMGB3P15-201ENST00000507326 CHD8Q9HCK8 2581 aa1.37□□□□□ -2.19
HMGB3P15-201ENST00000507326 FBN1P35555 2871 aaKnown RBP1.36□□□□□ -2.19
HMGB3P15-201ENST00000507326 A0A0D9SG42 100 aa1.36□□□□□ -2.19
HMGB3P15-201ENST00000507326 DEFB136Q30KP8 78 aa1.36□□□□□ -2.19
HMGB3P15-201ENST00000507326 LELP1Q5T871 98 aa1.36□□□□□ -2.19
HMGB3P15-201ENST00000507326 DNAH9Q9NYC9 4486 aa1.36□□□□□ -2.19
HMGB3P15-201ENST00000507326 CFAP46Q8IYW2 2715 aa1.36□□□□□ -2.19
HMGB3P15-201ENST00000507326 DNAH6Q9C0G6 4158 aa1.36□□□□□ -2.19
HMGB3P15-201ENST00000507326 ITPR1Q14643 2758 aa1.36□□□□□ -2.19
HMGB3P15-201ENST00000507326 ACACBO00763 2458 aa1.35□□□□□ -2.19
HMGB3P15-201ENST00000507326 ITPR3Q14573 2671 aa1.35□□□□□ -2.19
HMGB3P15-201ENST00000507326 IGSF10Q6WRI0 2623 aa1.35□□□□□ -2.19
HMGB3P15-201ENST00000507326 DEFB104AQ8WTQ1 72 aa1.35□□□□□ -2.19
HMGB3P15-201ENST00000507326 ZANQ9Y493 2812 aa1.35□□□□□ -2.19
HMGB3P15-201ENST00000507326 LRRK2Q5S007 2527 aa1.35□□□□□ -2.19
HMGB3P15-201ENST00000507326 TACC2O95359 2948 aa1.35□□□□□ -2.19
HMGB3P15-201ENST00000507326 UBR5O95071 2799 aaPredicted RBP1.35□□□□□ -2.19
HMGB3P15-201ENST00000507326 SONP18583 2426 aaKnown RBP1.35□□□□□ -2.19
HMGB3P15-201ENST00000507326 TRRAPQ9Y4A5 3859 aa1.35□□□□□ -2.19
HMGB3P15-201ENST00000507326 ASH1LQ9NR48 2969 aaKnown RBP1.35□□□□□ -2.19
HMGB3P15-201ENST00000507326 COL12A1Q99715 3063 aa1.34□□□□□ -2.19
HMGB3P15-201ENST00000507326 DNAH17Q9UFH2 4485 aa1.34□□□□□ -2.19
HMGB3P15-201ENST00000507326 MMP24-AS1A0A0U1RRL7 71 aa1.34□□□□□ -2.19
HMGB3P15-201ENST00000507326 TLN2Q9Y4G6 2542 aa1.34□□□□□ -2.2
HMGB3P15-201ENST00000507326 POLQO75417 2590 aa1.34□□□□□ -2.2
HMGB3P15-201ENST00000507326 PDZD2O15018 2839 aa1.34□□□□□ -2.2
HMGB3P15-201ENST00000507326 DNAH10Q8IVF4 4471 aa1.33□□□□□ -2.2
HMGB3P15-201ENST00000507326 MYO9AB2RTY4 2548 aa1.33□□□□□ -2.2
HMGB3P15-201ENST00000507326 DNAH8Q96JB1 4490 aa1.33□□□□□ -2.2
HMGB3P15-201ENST00000507326 FLNAP21333 2647 aaKnown RBP1.33□□□□□ -2.2
HMGB3P15-201ENST00000507326 PRKDCP78527 4128 aaKnown RBP1.33□□□□□ -2.2
HMGB3P15-201ENST00000507326 CELSR2Q9HCU4 2923 aa1.33□□□□□ -2.2
HMGB3P15-201ENST00000507326 SETXQ7Z333 2677 aaKnown RBP1.33□□□□□ -2.2
HMGB3P15-201ENST00000507326 ZFYVE26Q68DK2 2539 aa1.32□□□□□ -2.2
HMGB3P15-201ENST00000507326 KRTAP6-3Q3LI67 103 aa1.32□□□□□ -2.2
HMGB3P15-201ENST00000507326 S4R3F8 94 aa1.32□□□□□ -2.2
HMGB3P15-201ENST00000507326 CCDC168Q8NDH2 2452 aa1.32□□□□□ -2.2
HMGB3P15-201ENST00000507326 ABCA12Q86UK0 2595 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms