RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 RPS28P62857 69 aaKnown RBP12.86□□□□□ -0.35
RNF4-207ENST00000506706 ZCCHC13Q8WW36 166 aaKnown RBP12.86□□□□□ -0.35
RNF4-207ENST00000506706 TYMSOSQ8TAI1 123 aa12.84□□□□□ -0.35
RNF4-207ENST00000506706 H0Y9P7 68 aa12.81□□□□□ -0.36
RNF4-207ENST00000506706 ATP5EP56381 51 aaPredicted RBP12.81□□□□□ -0.36
RNF4-207ENST00000506706 LIMD2Q9BT23 127 aa12.81□□□□□ -0.36
RNF4-207ENST00000506706 NOTCH2NLQ7Z3S9 236 aa12.81□□□□□ -0.36
RNF4-207ENST00000506706 TP53AIP1Q9HCN2 124 aa12.81□□□□□ -0.36
RNF4-207ENST00000506706 C4orf48Q5BLP8 95 aa12.8□□□□□ -0.36
RNF4-207ENST00000506706 MRPL34Q9BQ48 92 aaKnown RBP12.8□□□□□ -0.36
RNF4-207ENST00000506706 H3BPC8 53 aa12.78□□□□□ -0.36
RNF4-207ENST00000506706 C1orf195Q5TG92 126 aa12.78□□□□□ -0.36
RNF4-207ENST00000506706 LINC00208Q96KT6 92 aa12.78□□□□□ -0.36
RNF4-207ENST00000506706 KMT2CQ8NEZ4 4911 aaKnown RBP12.77□□□□□ -0.36
RNF4-207ENST00000506706 APOBP04114 4563 aaKnown RBP12.76□□□□□ -0.37
RNF4-207ENST00000506706 TRAV22A0A0B4J277 110 aa12.76□□□□□ -0.37
RNF4-207ENST00000506706 C8orf87E5RJ46 101 aa12.75□□□□□ -0.37
RNF4-207ENST00000506706 NDUFS5O43920 106 aa12.75□□□□□ -0.37
RNF4-207ENST00000506706 KRTAP10-4P60372 401 aaPredicted RBP12.74□□□□□ -0.37
RNF4-207ENST00000506706 SPINK1P00995 79 aa12.74□□□□□ -0.37
RNF4-207ENST00000506706 PRR26Q8N8Z3 221 aa12.74□□□□□ -0.37
RNF4-207ENST00000506706 SERP1Q9Y6X1 66 aa12.72□□□□□ -0.37
RNF4-207ENST00000506706 C1orf64Q8NEQ6 169 aa12.69□□□□□ -0.38
RNF4-207ENST00000506706 OXTP01178 125 aa12.68□□□□□ -0.38
RNF4-207ENST00000506706 LINC00304Q8N9R0 145 aa12.68□□□□□ -0.38
RNF4-207ENST00000506706 LINC00313P59037 77 aa12.67□□□□□ -0.38
RNF4-207ENST00000506706 SPAG11AQ6PDA7 123 aa12.65□□□□□ -0.39
RNF4-207ENST00000506706 RPS29P62273 56 aaKnown RBP12.63□□□□□ -0.39
RNF4-207ENST00000506706 FAT1Q14517 4588 aa12.59□□□□□ -0.39
RNF4-207ENST00000506706 FAM229AH3BQW9 127 aa12.56□□□□□ -0.4
RNF4-207ENST00000506706 Q8N9P0 234 aaPredicted RBP12.53□□□□□ -0.4
RNF4-207ENST00000506706 SPANXA2-OT1Q8N9U9 137 aa12.53□□□□□ -0.4
RNF4-207ENST00000506706 CYP4F30PQ9H0H9 118 aa12.52□□□□□ -0.4
RNF4-207ENST00000506706 KRTAP16-1A8MUX0 517 aa12.5□□□□□ -0.41
RNF4-207ENST00000506706 PRR4Q16378 134 aa12.5□□□□□ -0.41
RNF4-207ENST00000506706 Q5W150 140 aa12.5□□□□□ -0.41
RNF4-207ENST00000506706 KRTAP13-3Q3SY46 172 aa12.49□□□□□ -0.41
RNF4-207ENST00000506706 PKHD1L1Q86WI1 4243 aa12.49□□□□□ -0.41
RNF4-207ENST00000506706 PCOTHQ58A44 107 aa12.46□□□□□ -0.41
RNF4-207ENST00000506706 LOC101927531A0A1B0GV80 90 aa12.46□□□□□ -0.42
RNF4-207ENST00000506706 SMIM26A0A096LP01 95 aa12.44□□□□□ -0.42
RNF4-207ENST00000506706 RYR3Q15413 4870 aa12.44□□□□□ -0.42
RNF4-207ENST00000506706 Q5VSD8 79 aa12.43□□□□□ -0.42
RNF4-207ENST00000506706 IGLV7-46A0A075B6I9 117 aa12.41□□□□□ -0.42
RNF4-207ENST00000506706 HSPG2P98160 4391 aa12.37□□□□□ -0.43
RNF4-207ENST00000506706 RETNLBQ9BQ08 111 aa12.36□□□□□ -0.43
RNF4-207ENST00000506706 FP248Q71RG6 208 aaPredicted RBP12.34□□□□□ -0.43
RNF4-207ENST00000506706 KRTAP10-8P60410 259 aa12.28□□□□□ -0.44
RNF4-207ENST00000506706 IGKV2-30P06310 120 aa12.26□□□□□ -0.45
RNF4-207ENST00000506706 C4orf26Q17RF5 130 aa12.26□□□□□ -0.45
RNF4-207ENST00000506706 Q8N1X5 172 aa12.26□□□□□ -0.45
RNF4-207ENST00000506706 RYR1P21817 5038 aa12.25□□□□□ -0.45
RNF4-207ENST00000506706 C9orf92A6NGG3 77 aa12.22□□□□□ -0.45
RNF4-207ENST00000506706 KRTAP17-1Q9BYP8 105 aa12.22□□□□□ -0.45
RNF4-207ENST00000506706 MPLKIPQ8TAP9 179 aa12.2□□□□□ -0.46
RNF4-207ENST00000506706 TNXBP22105 4242 aa12.19□□□□□ -0.46
RNF4-207ENST00000506706 COA5Q86WW8 74 aa12.18□□□□□ -0.46
RNF4-207ENST00000506706 HRES1P13985 223 aa12.17□□□□□ -0.46
RNF4-207ENST00000506706 FLG2Q5D862 2391 aaPredicted RBP12.17□□□□□ -0.46
RNF4-207ENST00000506706 IGKV2D-30A0A075B6S6 120 aa12.15□□□□□ -0.46
RNF4-207ENST00000506706 C20orf166-AS1Q96NR2 134 aa12.15□□□□□ -0.46
RNF4-207ENST00000506706 A8MUU9 505 aa12.14□□□□□ -0.47
RNF4-207ENST00000506706 LRP1Q07954 4544 aaKnown RBP12.13□□□□□ -0.47
RNF4-207ENST00000506706 Q1T7F1 81 aa12.11□□□□□ -0.47
RNF4-207ENST00000506706 FAT3Q8TDW7 4589 aa12.06□□□□□ -0.48
RNF4-207ENST00000506706 ACYP2P14621 99 aa12.05□□□□□ -0.48
RNF4-207ENST00000506706 C7orf65Q6ZTY9 151 aa12.05□□□□□ -0.48
RNF4-207ENST00000506706 DMAC1Q96GE9 116 aa12.05□□□□□ -0.48
RNF4-207ENST00000506706 KIAA1109Q2LD37 5005 aa12.05□□□□□ -0.48
RNF4-207ENST00000506706 V9GYY9 64 aa12.03□□□□□ -0.48
RNF4-207ENST00000506706 MT1HL1P0DM35 61 aa12□□□□□ -0.49
RNF4-207ENST00000506706 EPPK1P58107 5090 aaKnown RBP11.99□□□□□ -0.49
RNF4-207ENST00000506706 Q75L30 129 aa11.99□□□□□ -0.49
RNF4-207ENST00000506706 PSPHP1O15172 72 aa11.9□□□□□ -0.5
RNF4-207ENST00000506706 DMBT1Q9UGM3 2413 aaPredicted RBP11.9□□□□□ -0.51
RNF4-207ENST00000506706 CHKB-CPT1BH3BT56 60 aa11.89□□□□□ -0.51
RNF4-207ENST00000506706 A8MUN3 132 aa11.85□□□□□ -0.51
RNF4-207ENST00000506706 MYCBP2O75592 4640 aa11.84□□□□□ -0.51
RNF4-207ENST00000506706 SPINK7P58062 85 aa11.83□□□□□ -0.51
RNF4-207ENST00000506706 PRR15LQ9BU68 103 aa11.82□□□□□ -0.52
RNF4-207ENST00000506706 LINC01558Q9Y6Z2 57 aa11.82□□□□□ -0.52
RNF4-207ENST00000506706 ATP11AUNQ6ZP68 121 aa11.8□□□□□ -0.52
RNF4-207ENST00000506706 RPL37P61927 97 aaKnown RBP11.79□□□□□ -0.52
RNF4-207ENST00000506706 XP32Q5T750 250 aa11.79□□□□□ -0.52
RNF4-207ENST00000506706 KRTAP4-5Q9BYR2 181 aa11.79□□□□□ -0.52
RNF4-207ENST00000506706 Q5VV11 94 aa11.77□□□□□ -0.52
RNF4-207ENST00000506706 BRK1Q8WUW1 75 aa11.72□□□□□ -0.53
RNF4-207ENST00000506706 KRTAP3-1Q9BYR8 98 aa11.63□□□□□ -0.55
RNF4-207ENST00000506706 PRO0628Q9UI54 55 aa11.63□□□□□ -0.55
RNF4-207ENST00000506706 TPRXLQ17RH7 258 aa11.61□□□□□ -0.55
RNF4-207ENST00000506706 COX6B2Q6YFQ2 88 aa11.59□□□□□ -0.55
RNF4-207ENST00000506706 A6NED7 52 aa11.53□□□□□ -0.56
RNF4-207ENST00000506706 SPTSSBQ8NFR3 76 aa11.53□□□□□ -0.56
RNF4-207ENST00000506706 A0A1B0GU69 56 aa11.52□□□□□ -0.57
RNF4-207ENST00000506706 J3QL48 77 aa11.47□□□□□ -0.57
RNF4-207ENST00000506706 ABCA13Q86UQ4 5058 aa11.41□□□□□ -0.58
RNF4-207ENST00000506706 LCA10Q71F78 164 aa11.39□□□□□ -0.59
RNF4-207ENST00000506706 BIRC6Q9NR09 4857 aa11.37□□□□□ -0.59
RNF4-207ENST00000506706 A8MU10 97 aa11.37□□□□□ -0.59
RNF4-207ENST00000506706 CDC42SE1Q9NRR8 79 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms