RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 DEFB105AQ8NG35 78 aa5.26□□□□□ -1.57
NEDD9-210ENST00000505589 OBSCN-AS1Q96MR7 158 aa5.25□□□□□ -1.57
NEDD9-210ENST00000505589 JMJD7-PLA2G4BH0Y9G9 81 aa5.24□□□□□ -1.57
NEDD9-210ENST00000505589 NDUFV3P56181 108 aaKnown RBP5.24□□□□□ -1.57
NEDD9-210ENST00000505589 ATP11AUNQ6ZP68 121 aa5.24□□□□□ -1.57
NEDD9-210ENST00000505589 A0A1B0GV72 72 aa5.23□□□□□ -1.57
NEDD9-210ENST00000505589 C1orf195Q5TG92 126 aa5.23□□□□□ -1.57
NEDD9-210ENST00000505589 Q6Q795 121 aa5.23□□□□□ -1.57
NEDD9-210ENST00000505589 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
NEDD9-210ENST00000505589 SMIM29Q86T20 159 aa5.22□□□□□ -1.57
NEDD9-210ENST00000505589 K7ERU9 68 aa5.21□□□□□ -1.58
NEDD9-210ENST00000505589 RBM3P98179 157 aaKnown RBP5.21□□□□□ -1.58
NEDD9-210ENST00000505589 C14orf132Q9NPU4 83 aa5.21□□□□□ -1.58
NEDD9-210ENST00000505589 LOC110117498A0A087WWA1 95 aa5.2□□□□□ -1.58
NEDD9-210ENST00000505589 F8WEM9 126 aa5.2□□□□□ -1.58
NEDD9-210ENST00000505589 J3QR89 54 aa5.2□□□□□ -1.58
NEDD9-210ENST00000505589 TRBV7-4A0A0J9YYF1 115 aa5.19□□□□□ -1.58
NEDD9-210ENST00000505589 DSCR8Q96T75 97 aa5.19□□□□□ -1.58
NEDD9-210ENST00000505589 LINC00846Q9NV44 126 aa5.19□□□□□ -1.58
NEDD9-210ENST00000505589 PDE6GP18545 87 aa5.18□□□□□ -1.58
NEDD9-210ENST00000505589 C21orf62-AS1Q17RA5 79 aa5.18□□□□□ -1.58
NEDD9-210ENST00000505589 Q6ZQT0 140 aa5.18□□□□□ -1.58
NEDD9-210ENST00000505589 FAM240AA0A1B0GVK7 77 aa5.17□□□□□ -1.58
NEDD9-210ENST00000505589 CCKP06307 115 aa5.16□□□□□ -1.58
NEDD9-210ENST00000505589 Q6JHZ5 121 aa5.15□□□□□ -1.59
NEDD9-210ENST00000505589 Q75L30 129 aa5.15□□□□□ -1.59
NEDD9-210ENST00000505589 ACYP1P07311 99 aa5.14□□□□□ -1.59
NEDD9-210ENST00000505589 IGFL1Q6UW32 110 aa5.14□□□□□ -1.59
NEDD9-210ENST00000505589 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
NEDD9-210ENST00000505589 LCE4AQ5TA78 99 aa5.13□□□□□ -1.59
NEDD9-210ENST00000505589 VPS25Q9BRG1 176 aa5.12□□□□□ -1.59
NEDD9-210ENST00000505589 KRTAP9-8Q9BYQ0 159 aa5.12□□□□□ -1.59
NEDD9-210ENST00000505589 A0A1B0GW54 56 aa5.11□□□□□ -1.59
NEDD9-210ENST00000505589 A0A1W2PNM2 257 aa5.11□□□□□ -1.59
NEDD9-210ENST00000505589 A0A0G2JQZ4 141 aa5.1□□□□□ -1.59
NEDD9-210ENST00000505589 USH2AO75445 5202 aa5.08□□□□□ -1.6
NEDD9-210ENST00000505589 SSPOA2VEC9 5147 aa5.08□□□□□ -1.6
NEDD9-210ENST00000505589 Q96NJ1 140 aa5.07□□□□□ -1.6
NEDD9-210ENST00000505589 UBL5Q9BZL1 73 aa5.06□□□□□ -1.6
NEDD9-210ENST00000505589 A0A087WSZ3 146 aa5.05□□□□□ -1.6
NEDD9-210ENST00000505589 TRBV7-7A0A0K0K1E9 115 aa5.05□□□□□ -1.6
NEDD9-210ENST00000505589 Q6ZVQ6 151 aa5.05□□□□□ -1.6
NEDD9-210ENST00000505589 LINC00643Q86TS7 51 aa5.05□□□□□ -1.6
NEDD9-210ENST00000505589 FAM236DA0A1B0GTK5 79 aa5.04□□□□□ -1.6
NEDD9-210ENST00000505589 FAM236CP0DP71 79 aa5.04□□□□□ -1.6
NEDD9-210ENST00000505589 FCGBPQ9Y6R7 5405 aaPredicted RBP5.04□□□□□ -1.6
NEDD9-210ENST00000505589 ATP5EP2Q5VTU8 51 aa5.03□□□□□ -1.6
NEDD9-210ENST00000505589 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
NEDD9-210ENST00000505589 RBM12B-AS1Q9P1G2 102 aa5.03□□□□□ -1.6
NEDD9-210ENST00000505589 SS18L2Q9UHA2 77 aa5.03□□□□□ -1.6
NEDD9-210ENST00000505589 NREPQ16612 68 aa5.02□□□□□ -1.61
NEDD9-210ENST00000505589 C20orf166-AS1Q96NR2 134 aa5.02□□□□□ -1.61
NEDD9-210ENST00000505589 A8MUU9 505 aa5.01□□□□□ -1.61
NEDD9-210ENST00000505589 KRTAP10-10P60014 251 aa5.01□□□□□ -1.61
NEDD9-210ENST00000505589 MT-ATP8P03928 68 aa5□□□□□ -1.61
NEDD9-210ENST00000505589 CXCL6P80162 114 aa5□□□□□ -1.61
NEDD9-210ENST00000505589 MT2AP02795 61 aa4.99□□□□□ -1.61
NEDD9-210ENST00000505589 IGKV3D-7A0A0C4DH55 119 aa4.98□□□□□ -1.61
NEDD9-210ENST00000505589 BPY2O14599 106 aa4.98□□□□□ -1.61
NEDD9-210ENST00000505589 SIGMAR1Q99720 223 aa4.98□□□□□ -1.61
NEDD9-210ENST00000505589 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
NEDD9-210ENST00000505589 LINC00472Q9H8W2 130 aa4.98□□□□□ -1.61
NEDD9-210ENST00000505589 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
NEDD9-210ENST00000505589 J3KT08 172 aa4.96□□□□□ -1.62
NEDD9-210ENST00000505589 IMUPQ9GZP8 106 aa4.95□□□□□ -1.62
NEDD9-210ENST00000505589 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
NEDD9-210ENST00000505589 MT1FP04733 61 aa4.94□□□□□ -1.62
NEDD9-210ENST00000505589 DSCR10P59022 87 aa4.94□□□□□ -1.62
NEDD9-210ENST00000505589 DEFB116Q30KQ4 102 aa4.94□□□□□ -1.62
NEDD9-210ENST00000505589 IGKV4-1P06312 121 aa4.93□□□□□ -1.62
NEDD9-210ENST00000505589 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
NEDD9-210ENST00000505589 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
NEDD9-210ENST00000505589 A8MWP4 228 aa4.92□□□□□ -1.62
NEDD9-210ENST00000505589 LINC00313P59037 77 aa4.92□□□□□ -1.62
NEDD9-210ENST00000505589 HIST1H4AP62805 103 aaKnown RBP4.92□□□□□ -1.62
NEDD9-210ENST00000505589 Q8N9L7 120 aa4.92□□□□□ -1.62
NEDD9-210ENST00000505589 K7EQZ3 153 aa4.91□□□□□ -1.62
NEDD9-210ENST00000505589 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
NEDD9-210ENST00000505589 A0A087WVE0 104 aa4.9□□□□□ -1.63
NEDD9-210ENST00000505589 A0A1B0GVX0 72 aa4.89□□□□□ -1.63
NEDD9-210ENST00000505589 NDUFB1O75438 58 aa4.89□□□□□ -1.63
NEDD9-210ENST00000505589 LCE5AQ5TCM9 118 aa4.89□□□□□ -1.63
NEDD9-210ENST00000505589 PRR15Q8IV56 129 aa4.89□□□□□ -1.63
NEDD9-210ENST00000505589 MPLKIPQ8TAP9 179 aa4.89□□□□□ -1.63
NEDD9-210ENST00000505589 FAM236AA0A1B0GUQ0 79 aa4.87□□□□□ -1.63
NEDD9-210ENST00000505589 FAM236BA0A1B0GV22 79 aa4.87□□□□□ -1.63
NEDD9-210ENST00000505589 SCGB1A1P11684 91 aa4.87□□□□□ -1.63
NEDD9-210ENST00000505589 IGHV6-1A0A0B4J1U7 121 aa4.86□□□□□ -1.63
NEDD9-210ENST00000505589 HRES1P13985 223 aa4.86□□□□□ -1.63
NEDD9-210ENST00000505589 MMP24-AS1A0A0U1RRL7 71 aa4.85□□□□□ -1.63
NEDD9-210ENST00000505589 HCG22E2RYF7 251 aa4.85□□□□□ -1.63
NEDD9-210ENST00000505589 KRTAP16-1A8MUX0 517 aa4.84□□□□□ -1.63
NEDD9-210ENST00000505589 C8orf87E5RJ46 101 aa4.84□□□□□ -1.63
NEDD9-210ENST00000505589 NOTCH2NLQ7Z3S9 236 aa4.84□□□□□ -1.63
NEDD9-210ENST00000505589 C8orf17Q9NRJ1 99 aa4.84□□□□□ -1.63
NEDD9-210ENST00000505589 CASC2Q6XLA1 102 aa4.82□□□□□ -1.64
NEDD9-210ENST00000505589 WFDC13Q8IUB5 93 aa4.82□□□□□ -1.64
NEDD9-210ENST00000505589 ATOX1O00244 68 aa4.81□□□□□ -1.64
NEDD9-210ENST00000505589 hDV103S1A0JD37 113 aa4.8□□□□□ -1.64
NEDD9-210ENST00000505589 TMEM254Q8TBM7 123 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms