RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 KRTAP3-1Q9BYR8 98 aa2.86□□□□□ -1.95
LINC02397-201ENST00000504409 FRYQ5TBA9 3013 aa2.86□□□□□ -1.95
LINC02397-201ENST00000504409 TENM2Q9NT68 2774 aa2.86□□□□□ -1.95
LINC02397-201ENST00000504409 ZZEF1O43149 2961 aa2.85□□□□□ -1.95
LINC02397-201ENST00000504409 HIVEP1P15822 2718 aa2.84□□□□□ -1.95
LINC02397-201ENST00000504409 TENM3Q9P273 2699 aa2.84□□□□□ -1.96
LINC02397-201ENST00000504409 FRYLO94915 3013 aa2.81□□□□□ -1.96
LINC02397-201ENST00000504409 KRTAP3-2Q9BYR7 98 aa2.81□□□□□ -1.96
LINC02397-201ENST00000504409 TACC2O95359 2948 aa2.81□□□□□ -1.96
LINC02397-201ENST00000504409 KALRNO60229 2985 aa2.8□□□□□ -1.96
LINC02397-201ENST00000504409 MXRA5Q9NR99 2828 aa2.79□□□□□ -1.96
LINC02397-201ENST00000504409 NBEAQ8NFP9 2946 aa2.78□□□□□ -1.96
LINC02397-201ENST00000504409 SRRM2Q9UQ35 2752 aaKnown RBP2.75□□□□□ -1.97
LINC02397-201ENST00000504409 ASH1LQ9NR48 2969 aaKnown RBP2.75□□□□□ -1.97
LINC02397-201ENST00000504409 NF1P21359 2839 aa2.75□□□□□ -1.97
LINC02397-201ENST00000504409 VWFP04275 2813 aa2.75□□□□□ -1.97
LINC02397-201ENST00000504409 CFAP54Q96N23 3096 aa2.75□□□□□ -1.97
LINC02397-201ENST00000504409 KRTAP3-3Q9BYR6 98 aa2.74□□□□□ -1.97
LINC02397-201ENST00000504409 AKAP9Q99996 3911 aa2.74□□□□□ -1.97
LINC02397-201ENST00000504409 TENM1Q9UKZ4 2725 aa2.74□□□□□ -1.97
LINC02397-201ENST00000504409 LAMA1P25391 3075 aa2.73□□□□□ -1.97
LINC02397-201ENST00000504409 CMYA5Q8N3K9 4069 aa2.72□□□□□ -1.97
LINC02397-201ENST00000504409 PDZD2O15018 2839 aa2.72□□□□□ -1.97
LINC02397-201ENST00000504409 CELSR2Q9HCU4 2923 aa2.71□□□□□ -1.97
LINC02397-201ENST00000504409 C5orf42Q9H799 3197 aa2.71□□□□□ -1.98
LINC02397-201ENST00000504409 COL12A1Q99715 3063 aa2.71□□□□□ -1.98
LINC02397-201ENST00000504409 ZANQ9Y493 2812 aa2.69□□□□□ -1.98
LINC02397-201ENST00000504409 CEP350Q5VT06 3117 aa2.68□□□□□ -1.98
LINC02397-201ENST00000504409 PCNTO95613 3336 aa2.68□□□□□ -1.98
LINC02397-201ENST00000504409 VPS13AQ96RL7 3174 aa2.67□□□□□ -1.98
LINC02397-201ENST00000504409 A0A1B0GVY2 172 aa2.66□□□□□ -1.98
LINC02397-201ENST00000504409 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
LINC02397-201ENST00000504409 GOLGB1Q14789 3259 aaKnown RBP2.65□□□□□ -1.98
LINC02397-201ENST00000504409 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.98
LINC02397-201ENST00000504409 UTRNP46939 3433 aa2.65□□□□□ -1.98
LINC02397-201ENST00000504409 HTTP42858 3142 aa2.65□□□□□ -1.99
LINC02397-201ENST00000504409 LAMA2P24043 3122 aaKnown RBP2.64□□□□□ -1.99
LINC02397-201ENST00000504409 TENM4Q6N022 2769 aa2.64□□□□□ -1.99
LINC02397-201ENST00000504409 DNAH3Q8TD57 4116 aa2.64□□□□□ -1.99
LINC02397-201ENST00000504409 TRIOO75962 3097 aa2.63□□□□□ -1.99
LINC02397-201ENST00000504409 PKD1L1Q8TDX9 2849 aa2.62□□□□□ -1.99
LINC02397-201ENST00000504409 MT3P25713 68 aa2.62□□□□□ -1.99
LINC02397-201ENST00000504409 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
LINC02397-201ENST00000504409 MEGF8Q7Z7M0 2845 aa2.62□□□□□ -1.99
LINC02397-201ENST00000504409 WDFY4Q6ZS81 3184 aa2.61□□□□□ -1.99
LINC02397-201ENST00000504409 DCHS2Q6V1P9 2916 aa2.61□□□□□ -1.99
LINC02397-201ENST00000504409 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
LINC02397-201ENST00000504409 ADGRG4Q8IZF6 3080 aa2.6□□□□□ -1.99
LINC02397-201ENST00000504409 NBPF19A0A087WUL8 3843 aa2.6□□□□□ -1.99
LINC02397-201ENST00000504409 CELSR1Q9NYQ6 3014 aa2.59□□□□□ -1.99
LINC02397-201ENST00000504409 USP34Q70CQ2 3546 aa2.59□□□□□ -1.99
LINC02397-201ENST00000504409 FBN2P35556 2912 aa2.58□□□□□ -2
LINC02397-201ENST00000504409 RANBP2P49792 3224 aaKnown RBP2.55□□□□□ -2
LINC02397-201ENST00000504409 DNAH6Q9C0G6 4158 aa2.55□□□□□ -2
LINC02397-201ENST00000504409 PRUNE2Q8WUY3 3088 aa2.54□□□□□ -2
LINC02397-201ENST00000504409 ANK2Q01484 3957 aa2.54□□□□□ -2
LINC02397-201ENST00000504409 UNC80Q8N2C7 3258 aa2.53□□□□□ -2
LINC02397-201ENST00000504409 HUWE1Q7Z6Z7 4374 aaKnown RBP2.52□□□□□ -2.01
LINC02397-201ENST00000504409 DMXL2Q8TDJ6 3036 aa2.51□□□□□ -2.01
LINC02397-201ENST00000504409 KRTAP8-1Q8IUC2 63 aa2.51□□□□□ -2.01
LINC02397-201ENST00000504409 CRYBG3Q68DQ2 2970 aa2.49□□□□□ -2.01
LINC02397-201ENST00000504409 DMXL1Q9Y485 3027 aa2.48□□□□□ -2.01
LINC02397-201ENST00000504409 OTOGQ6ZRI0 2925 aa2.48□□□□□ -2.01
LINC02397-201ENST00000504409 LYSTQ99698 3801 aa2.47□□□□□ -2.01
LINC02397-201ENST00000504409 DNAH7Q8WXX0 4024 aa2.47□□□□□ -2.01
LINC02397-201ENST00000504409 SPRR2GQ9BYE4 73 aa2.47□□□□□ -2.01
LINC02397-201ENST00000504409 ATMQ13315 3056 aa2.46□□□□□ -2.02
LINC02397-201ENST00000504409 FBN3Q75N90 2809 aa2.45□□□□□ -2.02
LINC02397-201ENST00000504409 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
LINC02397-201ENST00000504409 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
LINC02397-201ENST00000504409 SPENQ96T58 3664 aaKnown RBP2.43□□□□□ -2.02
LINC02397-201ENST00000504409 BOD1L1Q8NFC6 3051 aa2.42□□□□□ -2.02
LINC02397-201ENST00000504409 LORP23490 312 aaPredicted RBP2.42□□□□□ -2.02
LINC02397-201ENST00000504409 REV3LO60673 3130 aa2.42□□□□□ -2.02
LINC02397-201ENST00000504409 TRRAPQ9Y4A5 3859 aa2.42□□□□□ -2.02
LINC02397-201ENST00000504409 HECTD4Q9Y4D8 3996 aa2.42□□□□□ -2.02
LINC02397-201ENST00000504409 MKI67P46013 3256 aaKnown RBP2.41□□□□□ -2.02
LINC02397-201ENST00000504409 XIRP2A4UGR9 3374 aa2.4□□□□□ -2.03
LINC02397-201ENST00000504409 BSNQ9UPA5 3926 aa2.4□□□□□ -2.03
LINC02397-201ENST00000504409 ZFHX4Q86UP3 3567 aa2.39□□□□□ -2.03
LINC02397-201ENST00000504409 SPTBN5Q9NRC6 3674 aaKnown RBP2.39□□□□□ -2.03
LINC02397-201ENST00000504409 FREM2Q5SZK8 3169 aa2.39□□□□□ -2.03
LINC02397-201ENST00000504409 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
LINC02397-201ENST00000504409 COL7A1Q02388 2944 aa2.38□□□□□ -2.03
LINC02397-201ENST00000504409 BRCA2P51587 3418 aa2.38□□□□□ -2.03
LINC02397-201ENST00000504409 LAMA3Q16787 3333 aa2.37□□□□□ -2.03
LINC02397-201ENST00000504409 PRKDCP78527 4128 aaKnown RBP2.36□□□□□ -2.03
LINC02397-201ENST00000504409 DNAH1Q9P2D7 4330 aa2.35□□□□□ -2.03
LINC02397-201ENST00000504409 MT1HL1P0DM35 61 aa2.35□□□□□ -2.03
LINC02397-201ENST00000504409 VCANP13611 3396 aa2.35□□□□□ -2.03
LINC02397-201ENST00000504409 DNAH14Q0VDD8 3507 aa2.35□□□□□ -2.03
LINC02397-201ENST00000504409 COL6A3P12111 3177 aa2.32□□□□□ -2.04
LINC02397-201ENST00000504409 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
LINC02397-201ENST00000504409 VPS13CQ709C8 3753 aa2.32□□□□□ -2.04
LINC02397-201ENST00000504409 EYSQ5T1H1 3165 aa2.31□□□□□ -2.04
LINC02397-201ENST00000504409 DYNC2H1Q8NCM8 4307 aaKnown RBP2.31□□□□□ -2.04
LINC02397-201ENST00000504409 FAT2Q9NYQ8 4349 aa2.31□□□□□ -2.04
LINC02397-201ENST00000504409 CDH23Q9H251 3354 aa2.3□□□□□ -2.04
LINC02397-201ENST00000504409 FRAS1Q86XX4 4008 aa2.29□□□□□ -2.04
LINC02397-201ENST00000504409 DNAH2Q9P225 4427 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms