RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 RETNLBQ9BQ08 111 aa3.56□□□□□ -1.84
SOX2-OT-218ENST00000498731 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
SOX2-OT-218ENST00000498731 KRTAP1-5Q9BYS1 174 aa3.55□□□□□ -1.84
SOX2-OT-218ENST00000498731 SPRR4Q96PI1 79 aa3.55□□□□□ -1.84
SOX2-OT-218ENST00000498731 KRTAP26-1Q6PEX3 210 aa3.55□□□□□ -1.84
SOX2-OT-218ENST00000498731 A0A087WSZ3 146 aa3.54□□□□□ -1.84
SOX2-OT-218ENST00000498731 CASC2Q6XLA1 102 aa3.54□□□□□ -1.84
SOX2-OT-218ENST00000498731 C8orf17Q9NRJ1 99 aa3.54□□□□□ -1.84
SOX2-OT-218ENST00000498731 IGLV7-46A0A075B6I9 117 aa3.54□□□□□ -1.84
SOX2-OT-218ENST00000498731 NUPR2A6NF83 97 aa3.54□□□□□ -1.84
SOX2-OT-218ENST00000498731 APLNQ9ULZ1 77 aa3.54□□□□□ -1.84
SOX2-OT-218ENST00000498731 GVQW2A0A096LPI5 108 aaPredicted RBP3.53□□□□□ -1.84
SOX2-OT-218ENST00000498731 KRTAP4-16G5E9R7 235 aaPredicted RBP3.53□□□□□ -1.84
SOX2-OT-218ENST00000498731 KRTAP7-1Q8IUC3 87 aa3.53□□□□□ -1.84
SOX2-OT-218ENST00000498731 A0A096LNI7 61 aa3.53□□□□□ -1.84
SOX2-OT-218ENST00000498731 HUWE1Q7Z6Z7 4374 aaKnown RBP3.53□□□□□ -1.85
SOX2-OT-218ENST00000498731 C1orf134Q5TEV5 83 aa3.52□□□□□ -1.85
SOX2-OT-218ENST00000498731 IGFL1Q6UW32 110 aa3.52□□□□□ -1.85
SOX2-OT-218ENST00000498731 STARD9Q9P2P6 4700 aa3.52□□□□□ -1.85
SOX2-OT-218ENST00000498731 NBDYA0A0U1RRE5 68 aa3.52□□□□□ -1.85
SOX2-OT-218ENST00000498731 PRLHP81277 87 aa3.51□□□□□ -1.85
SOX2-OT-218ENST00000498731 H3BQ85 93 aa3.51□□□□□ -1.85
SOX2-OT-218ENST00000498731 P0C880 135 aa3.5□□□□□ -1.85
SOX2-OT-218ENST00000498731 DNAH3Q8TD57 4116 aa3.5□□□□□ -1.85
SOX2-OT-218ENST00000498731 Q6ZRX8 168 aa3.5□□□□□ -1.85
SOX2-OT-218ENST00000498731 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
SOX2-OT-218ENST00000498731 CRIPTQ9P021 101 aa3.49□□□□□ -1.85
SOX2-OT-218ENST00000498731 HYDINQ4G0P3 5121 aa3.49□□□□□ -1.85
SOX2-OT-218ENST00000498731 C14orf177Q52M58 125 aa3.48□□□□□ -1.85
SOX2-OT-218ENST00000498731 A8MWP4 228 aa3.48□□□□□ -1.85
SOX2-OT-218ENST00000498731 EPPK1P58107 5090 aaKnown RBP3.47□□□□□ -1.85
SOX2-OT-218ENST00000498731 PLECQ15149 4684 aaKnown RBP3.47□□□□□ -1.85
SOX2-OT-218ENST00000498731 IGLV8-61A0A075B6I0 122 aa3.47□□□□□ -1.85
SOX2-OT-218ENST00000498731 A0A087X002 238 aa3.47□□□□□ -1.85
SOX2-OT-218ENST00000498731 MMP24-AS1A0A0U1RRL7 71 aa3.47□□□□□ -1.85
SOX2-OT-218ENST00000498731 KMT2AQ03164 3969 aa3.47□□□□□ -1.85
SOX2-OT-218ENST00000498731 DNAH7Q8WXX0 4024 aa3.46□□□□□ -1.86
SOX2-OT-218ENST00000498731 ROMO1P60602 79 aa3.46□□□□□ -1.86
SOX2-OT-218ENST00000498731 DNAH17Q9UFH2 4485 aa3.45□□□□□ -1.86
SOX2-OT-218ENST00000498731 PANO1I0J062 215 aa3.44□□□□□ -1.86
SOX2-OT-218ENST00000498731 ZNF861PO60384 105 aa3.44□□□□□ -1.86
SOX2-OT-218ENST00000498731 LINC00472Q9H8W2 130 aa3.44□□□□□ -1.86
SOX2-OT-218ENST00000498731 A0A087WTM6 91 aa3.44□□□□□ -1.86
SOX2-OT-218ENST00000498731 TLX1NBP0CAT3 122 aa3.44□□□□□ -1.86
SOX2-OT-218ENST00000498731 CIRBP-AS1Q8TBR5 109 aa3.44□□□□□ -1.86
SOX2-OT-218ENST00000498731 KRTAP11-1Q8IUC1 163 aa3.43□□□□□ -1.86
SOX2-OT-218ENST00000498731 KRTAP4-8Q9BYQ9 185 aa3.43□□□□□ -1.86
SOX2-OT-218ENST00000498731 DNAH8Q96JB1 4490 aa3.43□□□□□ -1.86
SOX2-OT-218ENST00000498731 RYR2Q92736 4967 aa3.43□□□□□ -1.86
SOX2-OT-218ENST00000498731 Q5W150 140 aa3.43□□□□□ -1.86
SOX2-OT-218ENST00000498731 SACSQ9NZJ4 4579 aa3.42□□□□□ -1.86
SOX2-OT-218ENST00000498731 SPRR1AP35321 89 aa3.42□□□□□ -1.86
SOX2-OT-218ENST00000498731 SPATA8Q6RVD6 105 aa3.42□□□□□ -1.86
SOX2-OT-218ENST00000498731 VPS13DQ5THJ4 4388 aa3.42□□□□□ -1.86
SOX2-OT-218ENST00000498731 H3BPC8 53 aa3.42□□□□□ -1.86
SOX2-OT-218ENST00000498731 ANAPC11Q9NYG5 84 aa3.41□□□□□ -1.86
SOX2-OT-218ENST00000498731 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.86
SOX2-OT-218ENST00000498731 A0A1B0GW54 56 aa3.4□□□□□ -1.87
SOX2-OT-218ENST00000498731 Q96NJ1 140 aa3.4□□□□□ -1.87
SOX2-OT-218ENST00000498731 DMBT1Q9UGM3 2413 aaPredicted RBP3.39□□□□□ -1.87
SOX2-OT-218ENST00000498731 Q6ZRN7 208 aaPredicted RBP3.39□□□□□ -1.87
SOX2-OT-218ENST00000498731 KIAA1109Q2LD37 5005 aa3.39□□□□□ -1.87
SOX2-OT-218ENST00000498731 A0A1B0GU69 56 aa3.38□□□□□ -1.87
SOX2-OT-218ENST00000498731 RYR1P21817 5038 aa3.38□□□□□ -1.87
SOX2-OT-218ENST00000498731 A8MUU9 505 aa3.38□□□□□ -1.87
SOX2-OT-218ENST00000498731 KRTAP10-2P60368 255 aa3.37□□□□□ -1.87
SOX2-OT-218ENST00000498731 ASB16-AS1Q495Z4 193 aa3.37□□□□□ -1.87
SOX2-OT-218ENST00000498731 PSORS1C2Q9UIG4 136 aa3.37□□□□□ -1.87
SOX2-OT-218ENST00000498731 KRTAP25-1Q3LHN0 102 aa3.36□□□□□ -1.87
SOX2-OT-218ENST00000498731 PKHD1P08F94 4074 aa3.36□□□□□ -1.87
SOX2-OT-218ENST00000498731 SPINK6Q6UWN8 80 aa3.36□□□□□ -1.87
SOX2-OT-218ENST00000498731 A0A1B0GVX0 72 aa3.36□□□□□ -1.87
SOX2-OT-218ENST00000498731 SPACA4Q8TDM5 124 aa3.35□□□□□ -1.87
SOX2-OT-218ENST00000498731 SMR3BP02814 79 aaPredicted RBP3.34□□□□□ -1.87
SOX2-OT-218ENST00000498731 LINC00304Q8N9R0 145 aa3.34□□□□□ -1.87
SOX2-OT-218ENST00000498731 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
SOX2-OT-218ENST00000498731 Q8N1X5 172 aa3.34□□□□□ -1.88
SOX2-OT-218ENST00000498731 KRTAP13-3Q3SY46 172 aa3.33□□□□□ -1.88
SOX2-OT-218ENST00000498731 HECTD4Q9Y4D8 3996 aa3.33□□□□□ -1.88
SOX2-OT-218ENST00000498731 DMAC1Q96GE9 116 aa3.33□□□□□ -1.88
SOX2-OT-218ENST00000498731 UQCR11O14957 56 aa3.33□□□□□ -1.88
SOX2-OT-218ENST00000498731 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
SOX2-OT-218ENST00000498731 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.32□□□□□ -1.88
SOX2-OT-218ENST00000498731 KRTAP10-1P60331 282 aa3.32□□□□□ -1.88
SOX2-OT-218ENST00000498731 KRTAP9-2Q9BYQ4 174 aa3.32□□□□□ -1.88
SOX2-OT-218ENST00000498731 BIRC6Q9NR09 4857 aa3.32□□□□□ -1.88
SOX2-OT-218ENST00000498731 LINC00483Q53H64 154 aa3.31□□□□□ -1.88
SOX2-OT-218ENST00000498731 PCLOQ9Y6V0 5065 aa3.31□□□□□ -1.88
SOX2-OT-218ENST00000498731 H0YAA0 97 aa3.31□□□□□ -1.88
SOX2-OT-218ENST00000498731 XP32Q5T750 250 aa3.3□□□□□ -1.88
SOX2-OT-218ENST00000498731 ACYP2P14621 99 aa3.3□□□□□ -1.88
SOX2-OT-218ENST00000498731 IGLV7-43P04211 117 aa3.29□□□□□ -1.88
SOX2-OT-218ENST00000498731 MRPL34Q9BQ48 92 aaKnown RBP3.29□□□□□ -1.88
SOX2-OT-218ENST00000498731 TP53AIP1Q9HCN2 124 aa3.28□□□□□ -1.88
SOX2-OT-218ENST00000498731 SPINK1P00995 79 aa3.28□□□□□ -1.88
SOX2-OT-218ENST00000498731 C20orf166-AS1Q96NR2 134 aa3.28□□□□□ -1.88
SOX2-OT-218ENST00000498731 DNAH2Q9P225 4427 aa3.28□□□□□ -1.88
SOX2-OT-218ENST00000498731 DYNC2H1Q8NCM8 4307 aaKnown RBP3.28□□□□□ -1.89
SOX2-OT-218ENST00000498731 KRTAP9-6A0A140TA67 174 aa3.27□□□□□ -1.89
SOX2-OT-218ENST00000498731 KRTAP3-1Q9BYR8 98 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 380 ms