RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 DYNC2H1Q8NCM8 4307 aaKnown RBP1.44□□□□□ -2.18
SNRNP48-202ENST00000496946 DEFB133Q30KQ1 61 aa1.43□□□□□ -2.18
SNRNP48-202ENST00000496946 SSPOA2VEC9 5147 aa1.43□□□□□ -2.18
SNRNP48-202ENST00000496946 DNHD1Q96M86 4753 aa1.43□□□□□ -2.18
SNRNP48-202ENST00000496946 PTPN13Q12923 2485 aa1.42□□□□□ -2.18
SNRNP48-202ENST00000496946 ZFYVE26Q68DK2 2539 aa1.42□□□□□ -2.18
SNRNP48-202ENST00000496946 CELSR2Q9HCU4 2923 aa1.41□□□□□ -2.18
SNRNP48-202ENST00000496946 A0A096LNI7 61 aa1.41□□□□□ -2.18
SNRNP48-202ENST00000496946 A0A096LPF7 62 aa1.41□□□□□ -2.18
SNRNP48-202ENST00000496946 KRTAP20-1Q3LI63 56 aa1.41□□□□□ -2.18
SNRNP48-202ENST00000496946 OTOGQ6ZRI0 2925 aa1.41□□□□□ -2.18
SNRNP48-202ENST00000496946 KMT2AQ03164 3969 aa1.4□□□□□ -2.18
SNRNP48-202ENST00000496946 KRTAP13-4Q3LI77 160 aa1.4□□□□□ -2.18
SNRNP48-202ENST00000496946 SPG11Q96JI7 2443 aa1.4□□□□□ -2.19
SNRNP48-202ENST00000496946 TENM2Q9NT68 2774 aa1.4□□□□□ -2.19
SNRNP48-202ENST00000496946 FAM186AA6NE01 2351 aa1.4□□□□□ -2.19
SNRNP48-202ENST00000496946 EPPK1P58107 5090 aaKnown RBP1.4□□□□□ -2.19
SNRNP48-202ENST00000496946 CREBBPQ92793 2442 aa1.4□□□□□ -2.19
SNRNP48-202ENST00000496946 FLNBO75369 2602 aaKnown RBP1.4□□□□□ -2.19
SNRNP48-202ENST00000496946 UBR5O95071 2799 aaPredicted RBP1.39□□□□□ -2.19
SNRNP48-202ENST00000496946 KRTAP12-1P59990 96 aa1.39□□□□□ -2.19
SNRNP48-202ENST00000496946 Q5VSD8 79 aa1.39□□□□□ -2.19
SNRNP48-202ENST00000496946 LRP1BQ9NZR2 4599 aa1.39□□□□□ -2.19
SNRNP48-202ENST00000496946 SPINK6Q6UWN8 80 aa1.39□□□□□ -2.19
SNRNP48-202ENST00000496946 GOLGB1Q14789 3259 aaKnown RBP1.39□□□□□ -2.19
SNRNP48-202ENST00000496946 DNAH1Q9P2D7 4330 aa1.37□□□□□ -2.19
SNRNP48-202ENST00000496946 ABCA12Q86UK0 2595 aa1.37□□□□□ -2.19
SNRNP48-202ENST00000496946 PRUNE2Q8WUY3 3088 aa1.37□□□□□ -2.19
SNRNP48-202ENST00000496946 TENM4Q6N022 2769 aa1.36□□□□□ -2.19
SNRNP48-202ENST00000496946 ANKRD11Q6UB99 2663 aaPredicted RBP1.36□□□□□ -2.19
SNRNP48-202ENST00000496946 CCDC168Q8NDH2 2452 aa1.36□□□□□ -2.19
SNRNP48-202ENST00000496946 SPTBN5Q9NRC6 3674 aaKnown RBP1.36□□□□□ -2.19
SNRNP48-202ENST00000496946 CEP290O15078 2479 aa1.36□□□□□ -2.19
SNRNP48-202ENST00000496946 VPS13AQ96RL7 3174 aa1.35□□□□□ -2.19
SNRNP48-202ENST00000496946 F8P00451 2351 aa1.35□□□□□ -2.19
SNRNP48-202ENST00000496946 KRTAP10-1P60331 282 aa1.35□□□□□ -2.19
SNRNP48-202ENST00000496946 TRANK1O15050 2925 aa1.35□□□□□ -2.19
SNRNP48-202ENST00000496946 RANBP2P49792 3224 aaKnown RBP1.35□□□□□ -2.19
SNRNP48-202ENST00000496946 DEFB103AP81534 67 aa1.35□□□□□ -2.19
SNRNP48-202ENST00000496946 CRYBG3Q68DQ2 2970 aa1.34□□□□□ -2.19
SNRNP48-202ENST00000496946 RIF1Q5UIP0 2472 aaKnown RBP1.34□□□□□ -2.19
SNRNP48-202ENST00000496946 NBASA2RRP1 2371 aa1.34□□□□□ -2.19
SNRNP48-202ENST00000496946 NBEAQ8NFP9 2946 aa1.34□□□□□ -2.19
SNRNP48-202ENST00000496946 KMT2CQ8NEZ4 4911 aaKnown RBP1.34□□□□□ -2.19
SNRNP48-202ENST00000496946 SRRM2Q9UQ35 2752 aaKnown RBP1.34□□□□□ -2.19
SNRNP48-202ENST00000496946 DMBT1Q9UGM3 2413 aaPredicted RBP1.34□□□□□ -2.19
SNRNP48-202ENST00000496946 CFAP54Q96N23 3096 aa1.34□□□□□ -2.2
SNRNP48-202ENST00000496946 KRTAP13-1Q8IUC0 172 aa1.34□□□□□ -2.2
SNRNP48-202ENST00000496946 ITPR1Q14643 2758 aa1.33□□□□□ -2.2
SNRNP48-202ENST00000496946 PRRC2CQ9Y520 2896 aaKnown RBP1.33□□□□□ -2.2
SNRNP48-202ENST00000496946 M0QZ58 72 aa1.33□□□□□ -2.2
SNRNP48-202ENST00000496946 KRTAP6-3Q3LI67 103 aa1.33□□□□□ -2.2
SNRNP48-202ENST00000496946 EP300Q09472 2414 aaPredicted RBP1.33□□□□□ -2.2
SNRNP48-202ENST00000496946 NCOR2Q9Y618 2525 aa1.33□□□□□ -2.2
SNRNP48-202ENST00000496946 IGSF10Q6WRI0 2623 aa1.32□□□□□ -2.2
SNRNP48-202ENST00000496946 CENPFP49454 3210 aa1.32□□□□□ -2.2
SNRNP48-202ENST00000496946 UTRNP46939 3433 aa1.32□□□□□ -2.2
SNRNP48-202ENST00000496946 SZT2Q5T011 3432 aa1.32□□□□□ -2.2
SNRNP48-202ENST00000496946 HTTP42858 3142 aa1.32□□□□□ -2.2
SNRNP48-202ENST00000496946 ZZEF1O43149 2961 aa1.32□□□□□ -2.2
SNRNP48-202ENST00000496946 LINC01556Q5JQF7 62 aa1.32□□□□□ -2.2
SNRNP48-202ENST00000496946 DEFB124Q8NES8 71 aa1.32□□□□□ -2.2
SNRNP48-202ENST00000496946 HECTD1Q9ULT8 2610 aa1.31□□□□□ -2.2
SNRNP48-202ENST00000496946 DNAH7Q8WXX0 4024 aa1.31□□□□□ -2.2
SNRNP48-202ENST00000496946 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
SNRNP48-202ENST00000496946 U3KQA8 63 aa1.31□□□□□ -2.2
SNRNP48-202ENST00000496946 ZANQ9Y493 2812 aa1.31□□□□□ -2.2
SNRNP48-202ENST00000496946 FRYLO94915 3013 aa1.31□□□□□ -2.2
SNRNP48-202ENST00000496946 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
SNRNP48-202ENST00000496946 H3BNG1 76 aa1.3□□□□□ -2.2
SNRNP48-202ENST00000496946 TRIOO75962 3097 aa1.3□□□□□ -2.2
SNRNP48-202ENST00000496946 PCNTO95613 3336 aa1.3□□□□□ -2.2
SNRNP48-202ENST00000496946 FAT4Q6V0I7 4981 aa1.3□□□□□ -2.2
SNRNP48-202ENST00000496946 NEBP20929 6669 aa1.3□□□□□ -2.2
SNRNP48-202ENST00000496946 TEX15Q9BXT5 2789 aa1.3□□□□□ -2.2
SNRNP48-202ENST00000496946 HYDINQ4G0P3 5121 aa1.3□□□□□ -2.2
SNRNP48-202ENST00000496946 C5orf42Q9H799 3197 aa1.3□□□□□ -2.2
SNRNP48-202ENST00000496946 HIVEP3Q5T1R4 2406 aa1.29□□□□□ -2.2
SNRNP48-202ENST00000496946 CFAP47Q6ZTR5 3102 aa1.29□□□□□ -2.2
SNRNP48-202ENST00000496946 VWFP04275 2813 aa1.29□□□□□ -2.2
SNRNP48-202ENST00000496946 MAP1AP78559 2803 aaPredicted RBP1.29□□□□□ -2.2
SNRNP48-202ENST00000496946 ANK2Q01484 3957 aa1.29□□□□□ -2.2
SNRNP48-202ENST00000496946 SONP18583 2426 aaKnown RBP1.29□□□□□ -2.2
SNRNP48-202ENST00000496946 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
SNRNP48-202ENST00000496946 WDFY4Q6ZS81 3184 aa1.29□□□□□ -2.2
SNRNP48-202ENST00000496946 KRTAP2-3P0C7H8 128 aa1.29□□□□□ -2.2
SNRNP48-202ENST00000496946 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
SNRNP48-202ENST00000496946 VPS13DQ5THJ4 4388 aa1.29□□□□□ -2.2
SNRNP48-202ENST00000496946 ANKHD1Q8IWZ3 2542 aaKnown RBP1.28□□□□□ -2.2
SNRNP48-202ENST00000496946 SPART-AS1P0CW21 52 aa1.28□□□□□ -2.2
SNRNP48-202ENST00000496946 HTN3P15516 51 aa1.28□□□□□ -2.2
SNRNP48-202ENST00000496946 MKI67P46013 3256 aaKnown RBP1.28□□□□□ -2.2
SNRNP48-202ENST00000496946 NF1P21359 2839 aa1.28□□□□□ -2.2
SNRNP48-202ENST00000496946 SPEGQ15772 3267 aa1.28□□□□□ -2.2
SNRNP48-202ENST00000496946 AKAP13Q12802 2813 aa1.27□□□□□ -2.21
SNRNP48-202ENST00000496946 KRTAP10-10P60014 251 aa1.27□□□□□ -2.21
SNRNP48-202ENST00000496946 BOD1L1Q8NFC6 3051 aa1.27□□□□□ -2.21
SNRNP48-202ENST00000496946 CELSR1Q9NYQ6 3014 aa1.26□□□□□ -2.21
SNRNP48-202ENST00000496946 NOTCH1P46531 2555 aa1.26□□□□□ -2.21
SNRNP48-202ENST00000496946 DNAH11Q96DT5 4516 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms