RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 PSORS1C2Q9UIG4 136 aa8.39□□□□□ -1.07
VCP-207ENST00000493886 LCE6AA0A183 80 aa8.37□□□□□ -1.07
VCP-207ENST00000493886 DNAH6Q9C0G6 4158 aa8.36□□□□□ -1.07
VCP-207ENST00000493886 ZCCHC13Q8WW36 166 aaKnown RBP8.35□□□□□ -1.07
VCP-207ENST00000493886 CYP4F30PQ9H0H9 118 aa8.35□□□□□ -1.07
VCP-207ENST00000493886 Q75L30 129 aa8.34□□□□□ -1.07
VCP-207ENST00000493886 LINC00208Q96KT6 92 aa8.33□□□□□ -1.08
VCP-207ENST00000493886 LINC00483Q53H64 154 aa8.33□□□□□ -1.08
VCP-207ENST00000493886 RETNLBQ9BQ08 111 aa8.32□□□□□ -1.08
VCP-207ENST00000493886 ZNF861PO60384 105 aa8.32□□□□□ -1.08
VCP-207ENST00000493886 KRTAP10-2P60368 255 aa8.32□□□□□ -1.08
VCP-207ENST00000493886 IGLV9-49A0A0B4J1Y8 123 aa8.31□□□□□ -1.08
VCP-207ENST00000493886 CASC2Q6XLA1 102 aa8.31□□□□□ -1.08
VCP-207ENST00000493886 DNAH8Q96JB1 4490 aa8.31□□□□□ -1.08
VCP-207ENST00000493886 ALMS1Q8TCU4 4167 aa8.3□□□□□ -1.08
VCP-207ENST00000493886 FRAS1Q86XX4 4008 aa8.28□□□□□ -1.08
VCP-207ENST00000493886 KRTAP29-1A8MX34 341 aaPredicted RBP8.27□□□□□ -1.09
VCP-207ENST00000493886 H0Y9P7 68 aa8.27□□□□□ -1.09
VCP-207ENST00000493886 LINC00472Q9H8W2 130 aa8.26□□□□□ -1.09
VCP-207ENST00000493886 A8MWP4 228 aa8.26□□□□□ -1.09
VCP-207ENST00000493886 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
VCP-207ENST00000493886 CIRBP-AS1Q8TBR5 109 aa8.26□□□□□ -1.09
VCP-207ENST00000493886 ANAPC11Q9NYG5 84 aa8.26□□□□□ -1.09
VCP-207ENST00000493886 LOC101927531A0A1B0GV80 90 aa8.25□□□□□ -1.09
VCP-207ENST00000493886 DNAH11Q96DT5 4516 aa8.25□□□□□ -1.09
VCP-207ENST00000493886 DNAH5Q8TE73 4624 aa8.24□□□□□ -1.09
VCP-207ENST00000493886 SPINK7P58062 85 aa8.23□□□□□ -1.09
VCP-207ENST00000493886 KRTAP10-1P60331 282 aa8.21□□□□□ -1.1
VCP-207ENST00000493886 Q6ZSA8 131 aa8.2□□□□□ -1.1
VCP-207ENST00000493886 NDUFB1O75438 58 aa8.2□□□□□ -1.1
VCP-207ENST00000493886 HYDINQ4G0P3 5121 aa8.2□□□□□ -1.1
VCP-207ENST00000493886 MMP24-AS1A0A0U1RRL7 71 aa8.19□□□□□ -1.1
VCP-207ENST00000493886 Q96NJ1 140 aa8.17□□□□□ -1.1
VCP-207ENST00000493886 FAT2Q9NYQ8 4349 aa8.16□□□□□ -1.1
VCP-207ENST00000493886 PLA2G1BP04054 148 aaKnown RBP8.16□□□□□ -1.1
VCP-207ENST00000493886 PCOTHQ58A44 107 aa8.16□□□□□ -1.1
VCP-207ENST00000493886 PKD1P98161 4303 aa8.16□□□□□ -1.1
VCP-207ENST00000493886 SPAG11AQ6PDA7 123 aa8.15□□□□□ -1.1
VCP-207ENST00000493886 IGHV6-1A0A0B4J1U7 121 aa8.15□□□□□ -1.11
VCP-207ENST00000493886 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
VCP-207ENST00000493886 SPINK6Q6UWN8 80 aa8.09□□□□□ -1.11
VCP-207ENST00000493886 C8orf17Q9NRJ1 99 aa8.09□□□□□ -1.11
VCP-207ENST00000493886 A0A087X002 238 aa8.09□□□□□ -1.12
VCP-207ENST00000493886 SSBP3-AS1Q7Z2R9 100 aa8.09□□□□□ -1.12
VCP-207ENST00000493886 NOTCH2NLQ7Z3S9 236 aa8.09□□□□□ -1.12
VCP-207ENST00000493886 COA5Q86WW8 74 aa8.08□□□□□ -1.12
VCP-207ENST00000493886 LRP1BQ9NZR2 4599 aa8.08□□□□□ -1.12
VCP-207ENST00000493886 H3BPC8 53 aa8.08□□□□□ -1.12
VCP-207ENST00000493886 SPANXA2-OT1Q8N9U9 137 aa8.07□□□□□ -1.12
VCP-207ENST00000493886 CDK2AP2O75956 126 aa8.06□□□□□ -1.12
VCP-207ENST00000493886 A0A1B0GVX0 72 aa8.05□□□□□ -1.12
VCP-207ENST00000493886 SACSQ9NZJ4 4579 aa8.05□□□□□ -1.12
VCP-207ENST00000493886 ASB16-AS1Q495Z4 193 aa8.03□□□□□ -1.12
VCP-207ENST00000493886 KRTAP13-2Q52LG2 175 aa8.02□□□□□ -1.12
VCP-207ENST00000493886 LINC01558Q9Y6Z2 57 aa8.02□□□□□ -1.13
VCP-207ENST00000493886 IGLV7-46A0A075B6I9 117 aa7.99□□□□□ -1.13
VCP-207ENST00000493886 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
VCP-207ENST00000493886 MRPL34Q9BQ48 92 aaKnown RBP7.99□□□□□ -1.13
VCP-207ENST00000493886 TP53AIP1Q9HCN2 124 aa7.99□□□□□ -1.13
VCP-207ENST00000493886 ROMO1P60602 79 aa7.99□□□□□ -1.13
VCP-207ENST00000493886 VPS13BQ7Z7G8 4022 aa7.97□□□□□ -1.13
VCP-207ENST00000493886 PKHD1P08F94 4074 aa7.94□□□□□ -1.14
VCP-207ENST00000493886 Q5W150 140 aa7.93□□□□□ -1.14
VCP-207ENST00000493886 A0A1B0GVY2 172 aa7.93□□□□□ -1.14
VCP-207ENST00000493886 HRES1P13985 223 aa7.9□□□□□ -1.15
VCP-207ENST00000493886 DYNC1H1Q14204 4646 aaKnown RBP7.89□□□□□ -1.15
VCP-207ENST00000493886 MIR22HGQ0VDD5 57 aa7.89□□□□□ -1.15
VCP-207ENST00000493886 TYMSOSQ8TAI1 123 aa7.89□□□□□ -1.15
VCP-207ENST00000493886 SMR3BP02814 79 aaPredicted RBP7.88□□□□□ -1.15
VCP-207ENST00000493886 P0C880 135 aa7.85□□□□□ -1.15
VCP-207ENST00000493886 SPINK1P00995 79 aa7.82□□□□□ -1.16
VCP-207ENST00000493886 RYR2Q92736 4967 aa7.82□□□□□ -1.16
VCP-207ENST00000493886 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
VCP-207ENST00000493886 APOBP04114 4563 aaKnown RBP7.79□□□□□ -1.16
VCP-207ENST00000493886 KRTAP10-4P60372 401 aaPredicted RBP7.79□□□□□ -1.16
VCP-207ENST00000493886 LINC00304Q8N9R0 145 aa7.78□□□□□ -1.16
VCP-207ENST00000493886 FAT1Q14517 4588 aa7.75□□□□□ -1.17
VCP-207ENST00000493886 KRTAP16-1A8MUX0 517 aa7.75□□□□□ -1.17
VCP-207ENST00000493886 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
VCP-207ENST00000493886 RPS29P62273 56 aaKnown RBP7.74□□□□□ -1.17
VCP-207ENST00000493886 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
VCP-207ENST00000493886 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
VCP-207ENST00000493886 IGKV2-30P06310 120 aa7.7□□□□□ -1.18
VCP-207ENST00000493886 ACYP2P14621 99 aa7.7□□□□□ -1.18
VCP-207ENST00000493886 SPATA8Q6RVD6 105 aa7.68□□□□□ -1.18
VCP-207ENST00000493886 KRTAP25-1Q3LHN0 102 aa7.66□□□□□ -1.18
VCP-207ENST00000493886 NDUFAF8A1L188 74 aa7.65□□□□□ -1.18
VCP-207ENST00000493886 DMAC1Q96GE9 116 aa7.65□□□□□ -1.18
VCP-207ENST00000493886 FLG2Q5D862 2391 aaPredicted RBP7.64□□□□□ -1.19
VCP-207ENST00000493886 PKHD1L1Q86WI1 4243 aa7.63□□□□□ -1.19
VCP-207ENST00000493886 A0A1B0GU69 56 aa7.6□□□□□ -1.19
VCP-207ENST00000493886 A8MUU9 505 aa7.59□□□□□ -1.19
VCP-207ENST00000493886 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
VCP-207ENST00000493886 UQCR11O14957 56 aa7.56□□□□□ -1.2
VCP-207ENST00000493886 Q5VSD8 79 aa7.55□□□□□ -1.2
VCP-207ENST00000493886 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
VCP-207ENST00000493886 C20orf166-AS1Q96NR2 134 aa7.54□□□□□ -1.2
VCP-207ENST00000493886 Q8N1X5 172 aa7.53□□□□□ -1.2
VCP-207ENST00000493886 RYR3Q15413 4870 aa7.52□□□□□ -1.2
VCP-207ENST00000493886 HSPG2P98160 4391 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms