RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ATP5EP56381 51 aaPredicted RBP8.27□□□□□ -1.09
PDZRN3-210ENST00000492909 FLG2Q5D862 2391 aaPredicted RBP8.26□□□□□ -1.09
PDZRN3-210ENST00000492909 PRR26Q8N8Z3 221 aa8.26□□□□□ -1.09
PDZRN3-210ENST00000492909 PKHD1L1Q86WI1 4243 aa8.26□□□□□ -1.09
PDZRN3-210ENST00000492909 TYMSOSQ8TAI1 123 aa8.25□□□□□ -1.09
PDZRN3-210ENST00000492909 K7EQZ3 153 aa8.25□□□□□ -1.09
PDZRN3-210ENST00000492909 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
PDZRN3-210ENST00000492909 A0A087WSZ3 146 aa8.23□□□□□ -1.09
PDZRN3-210ENST00000492909 CD164Q04900 197 aa8.22□□□□□ -1.09
PDZRN3-210ENST00000492909 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
PDZRN3-210ENST00000492909 Q5XG85 94 aa8.22□□□□□ -1.09
PDZRN3-210ENST00000492909 HCG22E2RYF7 251 aa8.2□□□□□ -1.1
PDZRN3-210ENST00000492909 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
PDZRN3-210ENST00000492909 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
PDZRN3-210ENST00000492909 DEFB116Q30KQ4 102 aa8.16□□□□□ -1.1
PDZRN3-210ENST00000492909 LINC00304Q8N9R0 145 aa8.16□□□□□ -1.1
PDZRN3-210ENST00000492909 C4orf26Q17RF5 130 aa8.15□□□□□ -1.1
PDZRN3-210ENST00000492909 SMIM26A0A096LP01 95 aa8.15□□□□□ -1.11
PDZRN3-210ENST00000492909 ZCCHC13Q8WW36 166 aaKnown RBP8.15□□□□□ -1.11
PDZRN3-210ENST00000492909 SPINK1P00995 79 aa8.14□□□□□ -1.11
PDZRN3-210ENST00000492909 SPAG11AQ6PDA7 123 aa8.14□□□□□ -1.11
PDZRN3-210ENST00000492909 FAT3Q8TDW7 4589 aa8.14□□□□□ -1.11
PDZRN3-210ENST00000492909 KRTAP10-8P60410 259 aa8.12□□□□□ -1.11
PDZRN3-210ENST00000492909 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
PDZRN3-210ENST00000492909 LINC00472Q9H8W2 130 aa8.11□□□□□ -1.11
PDZRN3-210ENST00000492909 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
PDZRN3-210ENST00000492909 WFDC13Q8IUB5 93 aa8.1□□□□□ -1.11
PDZRN3-210ENST00000492909 SEC61GP60059 68 aa8.1□□□□□ -1.11
PDZRN3-210ENST00000492909 PRR15Q8IV56 129 aa8.1□□□□□ -1.11
PDZRN3-210ENST00000492909 A8MWP4 228 aa8.09□□□□□ -1.11
PDZRN3-210ENST00000492909 RPS29P62273 56 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-210ENST00000492909 FP248Q71RG6 208 aaPredicted RBP8.09□□□□□ -1.11
PDZRN3-210ENST00000492909 J3QL48 77 aa8.08□□□□□ -1.12
PDZRN3-210ENST00000492909 ASB16-AS1Q495Z4 193 aa8.08□□□□□ -1.12
PDZRN3-210ENST00000492909 Q96NJ1 140 aa8.07□□□□□ -1.12
PDZRN3-210ENST00000492909 MT1HL1P0DM35 61 aa8.07□□□□□ -1.12
PDZRN3-210ENST00000492909 CASC2Q6XLA1 102 aa8.06□□□□□ -1.12
PDZRN3-210ENST00000492909 MP68P56378 58 aa8.04□□□□□ -1.12
PDZRN3-210ENST00000492909 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.13
PDZRN3-210ENST00000492909 NDUFB1O75438 58 aa8.02□□□□□ -1.13
PDZRN3-210ENST00000492909 C1orf195Q5TG92 126 aa8.02□□□□□ -1.13
PDZRN3-210ENST00000492909 TNXBP22105 4242 aa8.02□□□□□ -1.13
PDZRN3-210ENST00000492909 H3BPC8 53 aa8.01□□□□□ -1.13
PDZRN3-210ENST00000492909 hDV103S1A0JD37 113 aa8□□□□□ -1.13
PDZRN3-210ENST00000492909 CYP4F30PQ9H0H9 118 aa8□□□□□ -1.13
PDZRN3-210ENST00000492909 MMP24-AS1A0A0U1RRL7 71 aa7.99□□□□□ -1.13
PDZRN3-210ENST00000492909 TRAV22A0A0B4J277 110 aa7.99□□□□□ -1.13
PDZRN3-210ENST00000492909 H0Y9P7 68 aa7.99□□□□□ -1.13
PDZRN3-210ENST00000492909 HERC1Q15751 4861 aa7.97□□□□□ -1.13
PDZRN3-210ENST00000492909 LINC00208Q96KT6 92 aa7.97□□□□□ -1.13
PDZRN3-210ENST00000492909 C1orf64Q8NEQ6 169 aa7.97□□□□□ -1.13
PDZRN3-210ENST00000492909 A0A1B0GVX0 72 aa7.93□□□□□ -1.14
PDZRN3-210ENST00000492909 MPLKIPQ8TAP9 179 aa7.93□□□□□ -1.14
PDZRN3-210ENST00000492909 SPANXA2-OT1Q8N9U9 137 aa7.92□□□□□ -1.14
PDZRN3-210ENST00000492909 IGHV6-1A0A0B4J1U7 121 aa7.92□□□□□ -1.14
PDZRN3-210ENST00000492909 RETNLBQ9BQ08 111 aa7.92□□□□□ -1.14
PDZRN3-210ENST00000492909 C8orf17Q9NRJ1 99 aa7.91□□□□□ -1.14
PDZRN3-210ENST00000492909 PRR4Q16378 134 aa7.9□□□□□ -1.14
PDZRN3-210ENST00000492909 TP53AIP1Q9HCN2 124 aa7.89□□□□□ -1.15
PDZRN3-210ENST00000492909 Q1T7F1 81 aa7.87□□□□□ -1.15
PDZRN3-210ENST00000492909 C8orf87E5RJ46 101 aa7.85□□□□□ -1.15
PDZRN3-210ENST00000492909 PRO0628Q9UI54 55 aa7.85□□□□□ -1.15
PDZRN3-210ENST00000492909 V9GYY9 64 aa7.85□□□□□ -1.15
PDZRN3-210ENST00000492909 NOTCH2NLQ7Z3S9 236 aa7.84□□□□□ -1.15
PDZRN3-210ENST00000492909 LINC00313P59037 77 aa7.84□□□□□ -1.15
PDZRN3-210ENST00000492909 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
PDZRN3-210ENST00000492909 IGLV7-46A0A075B6I9 117 aa7.8□□□□□ -1.16
PDZRN3-210ENST00000492909 NDUFS5O43920 106 aa7.79□□□□□ -1.16
PDZRN3-210ENST00000492909 BRK1Q8WUW1 75 aa7.77□□□□□ -1.17
PDZRN3-210ENST00000492909 C9orf92A6NGG3 77 aa7.76□□□□□ -1.17
PDZRN3-210ENST00000492909 KRTAP16-1A8MUX0 517 aa7.75□□□□□ -1.17
PDZRN3-210ENST00000492909 PCOTHQ58A44 107 aa7.75□□□□□ -1.17
PDZRN3-210ENST00000492909 HMCN2Q8NDA2 5059 aa7.75□□□□□ -1.17
PDZRN3-210ENST00000492909 COA5Q86WW8 74 aa7.71□□□□□ -1.17
PDZRN3-210ENST00000492909 Q8N9P0 234 aaPredicted RBP7.71□□□□□ -1.18
PDZRN3-210ENST00000492909 PSPHP1O15172 72 aa7.7□□□□□ -1.18
PDZRN3-210ENST00000492909 KRTAP13-3Q3SY46 172 aa7.7□□□□□ -1.18
PDZRN3-210ENST00000492909 LOC101927531A0A1B0GV80 90 aa7.69□□□□□ -1.18
PDZRN3-210ENST00000492909 A8MUN3 132 aa7.67□□□□□ -1.18
PDZRN3-210ENST00000492909 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
PDZRN3-210ENST00000492909 Q5W150 140 aa7.66□□□□□ -1.18
PDZRN3-210ENST00000492909 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.18
PDZRN3-210ENST00000492909 A8MUU9 505 aa7.64□□□□□ -1.19
PDZRN3-210ENST00000492909 Q5VV11 94 aa7.64□□□□□ -1.19
PDZRN3-210ENST00000492909 XP32Q5T750 250 aa7.62□□□□□ -1.19
PDZRN3-210ENST00000492909 LPAP08519 4548 aa7.62□□□□□ -1.19
PDZRN3-210ENST00000492909 HRES1P13985 223 aa7.61□□□□□ -1.19
PDZRN3-210ENST00000492909 Q75L30 129 aa7.61□□□□□ -1.19
PDZRN3-210ENST00000492909 PRR15LQ9BU68 103 aa7.6□□□□□ -1.19
PDZRN3-210ENST00000492909 LRP2P98164 4655 aa7.59□□□□□ -1.19
PDZRN3-210ENST00000492909 LINC01558Q9Y6Z2 57 aa7.56□□□□□ -1.2
PDZRN3-210ENST00000492909 CHKB-CPT1BH3BT56 60 aa7.56□□□□□ -1.2
PDZRN3-210ENST00000492909 RPL37P61927 97 aaKnown RBP7.56□□□□□ -1.2
PDZRN3-210ENST00000492909 ATP11AUNQ6ZP68 121 aa7.53□□□□□ -1.2
PDZRN3-210ENST00000492909 IGKV2-30P06310 120 aa7.52□□□□□ -1.21
PDZRN3-210ENST00000492909 UBR4Q5T4S7 5183 aa7.51□□□□□ -1.21
PDZRN3-210ENST00000492909 ACYP2P14621 99 aa7.51□□□□□ -1.21
PDZRN3-210ENST00000492909 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
PDZRN3-210ENST00000492909 A6NED7 52 aa7.46□□□□□ -1.22
PDZRN3-210ENST00000492909 A8MU10 97 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms