RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 A0A1W2PPM0 123 aa5.66□□□□□ -1.5
CDC42SE1-206ENST00000492796 PDE6GP18545 87 aa5.66□□□□□ -1.5
CDC42SE1-206ENST00000492796 ATP11AUNQ6ZP68 121 aa5.65□□□□□ -1.5
CDC42SE1-206ENST00000492796 Q6ZQT0 140 aa5.65□□□□□ -1.5
CDC42SE1-206ENST00000492796 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.5
CDC42SE1-206ENST00000492796 A8MUU9 505 aa5.64□□□□□ -1.51
CDC42SE1-206ENST00000492796 DSCR10P59022 87 aa5.64□□□□□ -1.51
CDC42SE1-206ENST00000492796 H3BT86 120 aa5.63□□□□□ -1.51
CDC42SE1-206ENST00000492796 LINC00313P59037 77 aa5.63□□□□□ -1.51
CDC42SE1-206ENST00000492796 J3KT08 172 aa5.62□□□□□ -1.51
CDC42SE1-206ENST00000492796 DEFB116Q30KQ4 102 aa5.62□□□□□ -1.51
CDC42SE1-206ENST00000492796 C14orf132Q9NPU4 83 aa5.62□□□□□ -1.51
CDC42SE1-206ENST00000492796 CRCT1Q9UGL9 99 aa5.62□□□□□ -1.51
CDC42SE1-206ENST00000492796 FSIP2Q5CZC0 6907 aa5.61□□□□□ -1.51
CDC42SE1-206ENST00000492796 A0A1B0GVX0 72 aa5.6□□□□□ -1.51
CDC42SE1-206ENST00000492796 C8orf87E5RJ46 101 aa5.6□□□□□ -1.51
CDC42SE1-206ENST00000492796 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
CDC42SE1-206ENST00000492796 IGHV6-1A0A0B4J1U7 121 aa5.59□□□□□ -1.51
CDC42SE1-206ENST00000492796 KRTAP16-1A8MUX0 517 aa5.59□□□□□ -1.51
CDC42SE1-206ENST00000492796 SPCS1Q9Y6A9 102 aa5.58□□□□□ -1.52
CDC42SE1-206ENST00000492796 MTURNQ8N3F0 131 aa5.57□□□□□ -1.52
CDC42SE1-206ENST00000492796 NDUFB1O75438 58 aa5.56□□□□□ -1.52
CDC42SE1-206ENST00000492796 NOTCH2NLQ7Z3S9 236 aa5.56□□□□□ -1.52
CDC42SE1-206ENST00000492796 A8MWP4 228 aa5.54□□□□□ -1.52
CDC42SE1-206ENST00000492796 NREPQ16612 68 aa5.54□□□□□ -1.52
CDC42SE1-206ENST00000492796 COX6B2Q6YFQ2 88 aa5.54□□□□□ -1.52
CDC42SE1-206ENST00000492796 MT1HP80294 61 aa5.53□□□□□ -1.52
CDC42SE1-206ENST00000492796 GTF2H5Q6ZYL4 71 aa5.53□□□□□ -1.52
CDC42SE1-206ENST00000492796 K7EP34 96 aa5.52□□□□□ -1.53
CDC42SE1-206ENST00000492796 IGKV3D-7A0A0C4DH55 119 aa5.5□□□□□ -1.53
CDC42SE1-206ENST00000492796 C8orf17Q9NRJ1 99 aa5.5□□□□□ -1.53
CDC42SE1-206ENST00000492796 PRR15Q8IV56 129 aa5.49□□□□□ -1.53
CDC42SE1-206ENST00000492796 PRO0461Q9UI25 63 aa5.49□□□□□ -1.53
CDC42SE1-206ENST00000492796 K7ERU9 68 aa5.47□□□□□ -1.53
CDC42SE1-206ENST00000492796 Q8N9P0 234 aaPredicted RBP5.47□□□□□ -1.53
CDC42SE1-206ENST00000492796 ZCCHC13Q8WW36 166 aaKnown RBP5.46□□□□□ -1.54
CDC42SE1-206ENST00000492796 BPY2O14599 106 aa5.45□□□□□ -1.54
CDC42SE1-206ENST00000492796 PCP4P48539 62 aa5.45□□□□□ -1.54
CDC42SE1-206ENST00000492796 Q6ZVQ6 151 aa5.45□□□□□ -1.54
CDC42SE1-206ENST00000492796 FLGP20930 4061 aaPredicted RBP5.44□□□□□ -1.54
CDC42SE1-206ENST00000492796 MMP24-AS1A0A0U1RRL7 71 aa5.44□□□□□ -1.54
CDC42SE1-206ENST00000492796 K7EQZ3 153 aa5.44□□□□□ -1.54
CDC42SE1-206ENST00000492796 M0R2T5 61 aa5.44□□□□□ -1.54
CDC42SE1-206ENST00000492796 TMEM254Q8TBM7 123 aa5.44□□□□□ -1.54
CDC42SE1-206ENST00000492796 F8W1H4 67 aa5.42□□□□□ -1.54
CDC42SE1-206ENST00000492796 SVIPQ8NHG7 77 aa5.42□□□□□ -1.54
CDC42SE1-206ENST00000492796 MRPL34Q9BQ48 92 aaKnown RBP5.42□□□□□ -1.54
CDC42SE1-206ENST00000492796 hDV103S1A0JD37 113 aa5.41□□□□□ -1.54
CDC42SE1-206ENST00000492796 HRES1P13985 223 aa5.41□□□□□ -1.54
CDC42SE1-206ENST00000492796 MPLKIPQ8TAP9 179 aa5.41□□□□□ -1.54
CDC42SE1-206ENST00000492796 UBL5Q9BZL1 73 aa5.41□□□□□ -1.54
CDC42SE1-206ENST00000492796 RBM12B-AS1Q9P1G2 102 aa5.41□□□□□ -1.54
CDC42SE1-206ENST00000492796 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.54
CDC42SE1-206ENST00000492796 FAM236DA0A1B0GTK5 79 aa5.39□□□□□ -1.55
CDC42SE1-206ENST00000492796 FAM236CP0DP71 79 aa5.39□□□□□ -1.55
CDC42SE1-206ENST00000492796 LINC00846Q9NV44 126 aa5.39□□□□□ -1.55
CDC42SE1-206ENST00000492796 SPINK7P58062 85 aa5.38□□□□□ -1.55
CDC42SE1-206ENST00000492796 ETDBQ3ZM63 59 aa5.37□□□□□ -1.55
CDC42SE1-206ENST00000492796 J3QR89 54 aa5.36□□□□□ -1.55
CDC42SE1-206ENST00000492796 NDUFS5O43920 106 aa5.36□□□□□ -1.55
CDC42SE1-206ENST00000492796 Q8N9L7 120 aa5.36□□□□□ -1.55
CDC42SE1-206ENST00000492796 CASC2Q6XLA1 102 aa5.35□□□□□ -1.55
CDC42SE1-206ENST00000492796 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
CDC42SE1-206ENST00000492796 WFDC13Q8IUB5 93 aa5.33□□□□□ -1.56
CDC42SE1-206ENST00000492796 HCG22E2RYF7 251 aa5.31□□□□□ -1.56
CDC42SE1-206ENST00000492796 CXCL6P80162 114 aa5.31□□□□□ -1.56
CDC42SE1-206ENST00000492796 SCGB1A1P11684 91 aa5.3□□□□□ -1.56
CDC42SE1-206ENST00000492796 ACYP1P07311 99 aa5.28□□□□□ -1.56
CDC42SE1-206ENST00000492796 C7orf65Q6ZTY9 151 aa5.27□□□□□ -1.57
CDC42SE1-206ENST00000492796 FAM240AA0A1B0GVK7 77 aa5.26□□□□□ -1.57
CDC42SE1-206ENST00000492796 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE1-206ENST00000492796 Q5W150 140 aa5.26□□□□□ -1.57
CDC42SE1-206ENST00000492796 IGKV2D-30A0A075B6S6 120 aa5.25□□□□□ -1.57
CDC42SE1-206ENST00000492796 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
CDC42SE1-206ENST00000492796 ATP5EP2Q5VTU8 51 aa5.23□□□□□ -1.57
CDC42SE1-206ENST00000492796 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
CDC42SE1-206ENST00000492796 TP53AIP1Q9HCN2 124 aa5.23□□□□□ -1.57
CDC42SE1-206ENST00000492796 MT2AP02795 61 aa5.18□□□□□ -1.58
CDC42SE1-206ENST00000492796 H1FX-AS1Q4G0G2 97 aa5.18□□□□□ -1.58
CDC42SE1-206ENST00000492796 MT-ATP8P03928 68 aa5.15□□□□□ -1.59
CDC42SE1-206ENST00000492796 HIST1H4AP62805 103 aaKnown RBP5.14□□□□□ -1.59
CDC42SE1-206ENST00000492796 C4orf26Q17RF5 130 aa5.14□□□□□ -1.59
CDC42SE1-206ENST00000492796 LINC00643Q86TS7 51 aa5.14□□□□□ -1.59
CDC42SE1-206ENST00000492796 MT1FP04733 61 aa5.13□□□□□ -1.59
CDC42SE1-206ENST00000492796 TRAV22A0A0B4J277 110 aa5.11□□□□□ -1.59
CDC42SE1-206ENST00000492796 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
CDC42SE1-206ENST00000492796 LOC101927531A0A1B0GV80 90 aa5.08□□□□□ -1.6
CDC42SE1-206ENST00000492796 UQCRQO14949 82 aa5.08□□□□□ -1.6
CDC42SE1-206ENST00000492796 A0A087WVE0 104 aa5.07□□□□□ -1.6
CDC42SE1-206ENST00000492796 C1orf64Q8NEQ6 169 aa5.07□□□□□ -1.6
CDC42SE1-206ENST00000492796 ANAPC13Q9BS18 74 aa5.07□□□□□ -1.6
CDC42SE1-206ENST00000492796 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
CDC42SE1-206ENST00000492796 CYP4F30PQ9H0H9 118 aa5.07□□□□□ -1.6
CDC42SE1-206ENST00000492796 ATOX1O00244 68 aa5.06□□□□□ -1.6
CDC42SE1-206ENST00000492796 KRTAP3-1Q9BYR8 98 aa5.06□□□□□ -1.6
CDC42SE1-206ENST00000492796 H0Y9P7 68 aa5.04□□□□□ -1.6
CDC42SE1-206ENST00000492796 IMUPQ9GZP8 106 aa5.04□□□□□ -1.6
CDC42SE1-206ENST00000492796 S4R3F8 94 aa5.04□□□□□ -1.6
CDC42SE1-206ENST00000492796 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
CDC42SE1-206ENST00000492796 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 1100.4 ms