RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 C1orf64Q8NEQ6 169 aa5.7□□□□□ -1.5
BRCA1-219ENST00000491747 J3QL48 77 aa5.69□□□□□ -1.5
BRCA1-219ENST00000491747 IGFL1Q6UW32 110 aa5.69□□□□□ -1.5
BRCA1-219ENST00000491747 MP68P56378 58 aa5.68□□□□□ -1.5
BRCA1-219ENST00000491747 SPINK6Q6UWN8 80 aa5.68□□□□□ -1.5
BRCA1-219ENST00000491747 CYP4F30PQ9H0H9 118 aa5.68□□□□□ -1.5
BRCA1-219ENST00000491747 DMBT1Q9UGM3 2413 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-219ENST00000491747 MT1HL1P0DM35 61 aa5.67□□□□□ -1.5
BRCA1-219ENST00000491747 Q1T7F1 81 aa5.67□□□□□ -1.5
BRCA1-219ENST00000491747 IGLV8-61A0A075B6I0 122 aa5.67□□□□□ -1.5
BRCA1-219ENST00000491747 A0A087WSZ3 146 aa5.67□□□□□ -1.5
BRCA1-219ENST00000491747 IGLV7-43P04211 117 aa5.67□□□□□ -1.5
BRCA1-219ENST00000491747 PRLHP81277 87 aa5.65□□□□□ -1.5
BRCA1-219ENST00000491747 WFDC13Q8IUB5 93 aa5.65□□□□□ -1.5
BRCA1-219ENST00000491747 A0A0G2JQZ4 141 aa5.65□□□□□ -1.51
BRCA1-219ENST00000491747 DEFB116Q30KQ4 102 aa5.65□□□□□ -1.51
BRCA1-219ENST00000491747 TNXBP22105 4242 aa5.64□□□□□ -1.51
BRCA1-219ENST00000491747 UBE2AP49459 152 aa5.64□□□□□ -1.51
BRCA1-219ENST00000491747 TRAV22A0A0B4J277 110 aa5.63□□□□□ -1.51
BRCA1-219ENST00000491747 C1orf195Q5TG92 126 aa5.63□□□□□ -1.51
BRCA1-219ENST00000491747 H3BPC8 53 aa5.63□□□□□ -1.51
BRCA1-219ENST00000491747 PRR4Q16378 134 aa5.63□□□□□ -1.51
BRCA1-219ENST00000491747 LINC00208Q96KT6 92 aa5.62□□□□□ -1.51
BRCA1-219ENST00000491747 V9GYY9 64 aa5.62□□□□□ -1.51
BRCA1-219ENST00000491747 H0Y9J4 135 aa5.61□□□□□ -1.51
BRCA1-219ENST00000491747 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
BRCA1-219ENST00000491747 CASC2Q6XLA1 102 aa5.61□□□□□ -1.51
BRCA1-219ENST00000491747 PRR15Q8IV56 129 aa5.6□□□□□ -1.51
BRCA1-219ENST00000491747 SPANXA2-OT1Q8N9U9 137 aa5.6□□□□□ -1.51
BRCA1-219ENST00000491747 ZNF861PO60384 105 aa5.6□□□□□ -1.51
BRCA1-219ENST00000491747 A8MWP4 228 aa5.59□□□□□ -1.51
BRCA1-219ENST00000491747 H0Y9P7 68 aa5.59□□□□□ -1.51
BRCA1-219ENST00000491747 SPRR1BP22528 89 aa5.59□□□□□ -1.51
BRCA1-219ENST00000491747 PSPHP1O15172 72 aa5.59□□□□□ -1.51
BRCA1-219ENST00000491747 KRTAP1-4P0C5Y4 121 aa5.59□□□□□ -1.51
BRCA1-219ENST00000491747 KRTAP13-1Q8IUC0 172 aa5.58□□□□□ -1.52
BRCA1-219ENST00000491747 LINC00472Q9H8W2 130 aa5.57□□□□□ -1.52
BRCA1-219ENST00000491747 PRR26Q8N8Z3 221 aa5.57□□□□□ -1.52
BRCA1-219ENST00000491747 SEC61GP60059 68 aa5.55□□□□□ -1.52
BRCA1-219ENST00000491747 A8MUN3 132 aa5.54□□□□□ -1.52
BRCA1-219ENST00000491747 LIMD2Q9BT23 127 aa5.53□□□□□ -1.52
BRCA1-219ENST00000491747 ANAPC11Q9NYG5 84 aa5.53□□□□□ -1.52
BRCA1-219ENST00000491747 HMCN2Q8NDA2 5059 aa5.52□□□□□ -1.53
BRCA1-219ENST00000491747 A0A087X002 238 aa5.51□□□□□ -1.53
BRCA1-219ENST00000491747 MMP24-AS1A0A0U1RRL7 71 aa5.51□□□□□ -1.53
BRCA1-219ENST00000491747 Q5VV11 94 aa5.51□□□□□ -1.53
BRCA1-219ENST00000491747 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-219ENST00000491747 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
BRCA1-219ENST00000491747 TP53AIP1Q9HCN2 124 aa5.5□□□□□ -1.53
BRCA1-219ENST00000491747 IGLV7-46A0A075B6I9 117 aa5.49□□□□□ -1.53
BRCA1-219ENST00000491747 MOBPQ13875 183 aa5.49□□□□□ -1.53
BRCA1-219ENST00000491747 KRTAP13-2Q52LG2 175 aa5.49□□□□□ -1.53
BRCA1-219ENST00000491747 CHKB-CPT1BH3BT56 60 aa5.48□□□□□ -1.53
BRCA1-219ENST00000491747 COA5Q86WW8 74 aa5.47□□□□□ -1.53
BRCA1-219ENST00000491747 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
BRCA1-219ENST00000491747 ASB16-AS1Q495Z4 193 aa5.46□□□□□ -1.54
BRCA1-219ENST00000491747 IGLV9-49A0A0B4J1Y8 123 aa5.45□□□□□ -1.54
BRCA1-219ENST00000491747 TYMSOSQ8TAI1 123 aa5.45□□□□□ -1.54
BRCA1-219ENST00000491747 Q96NJ1 140 aa5.45□□□□□ -1.54
BRCA1-219ENST00000491747 C8orf17Q9NRJ1 99 aa5.44□□□□□ -1.54
BRCA1-219ENST00000491747 LOC101927531A0A1B0GV80 90 aa5.44□□□□□ -1.54
BRCA1-219ENST00000491747 PCOTHQ58A44 107 aa5.44□□□□□ -1.54
BRCA1-219ENST00000491747 Q75L30 129 aa5.44□□□□□ -1.54
BRCA1-219ENST00000491747 LINC00483Q53H64 154 aa5.43□□□□□ -1.54
BRCA1-219ENST00000491747 ZNF706Q9Y5V0 76 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-219ENST00000491747 NDUFS5O43920 106 aa5.42□□□□□ -1.54
BRCA1-219ENST00000491747 CD164Q04900 197 aa5.42□□□□□ -1.54
BRCA1-219ENST00000491747 A0A1B0GVX0 72 aa5.42□□□□□ -1.54
BRCA1-219ENST00000491747 IGHV6-1A0A0B4J1U7 121 aa5.41□□□□□ -1.54
BRCA1-219ENST00000491747 A6NED7 52 aa5.41□□□□□ -1.54
BRCA1-219ENST00000491747 A8MU10 97 aa5.41□□□□□ -1.54
BRCA1-219ENST00000491747 MRPL34Q9BQ48 92 aaKnown RBP5.4□□□□□ -1.54
BRCA1-219ENST00000491747 ATP11AUNQ6ZP68 121 aa5.4□□□□□ -1.55
BRCA1-219ENST00000491747 LPAP08519 4548 aa5.39□□□□□ -1.55
BRCA1-219ENST00000491747 LINC01558Q9Y6Z2 57 aa5.38□□□□□ -1.55
BRCA1-219ENST00000491747 UBR4Q5T4S7 5183 aa5.38□□□□□ -1.55
BRCA1-219ENST00000491747 LINC00304Q8N9R0 145 aa5.38□□□□□ -1.55
BRCA1-219ENST00000491747 SPTSSBQ8NFR3 76 aa5.38□□□□□ -1.55
BRCA1-219ENST00000491747 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
BRCA1-219ENST00000491747 LRP2P98164 4655 aa5.37□□□□□ -1.55
BRCA1-219ENST00000491747 LCA10Q71F78 164 aa5.37□□□□□ -1.55
BRCA1-219ENST00000491747 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
BRCA1-219ENST00000491747 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
BRCA1-219ENST00000491747 HRES1P13985 223 aa5.35□□□□□ -1.55
BRCA1-219ENST00000491747 RETNLBQ9BQ08 111 aa5.34□□□□□ -1.55
BRCA1-219ENST00000491747 NOTCH2NLQ7Z3S9 236 aa5.32□□□□□ -1.56
BRCA1-219ENST00000491747 SSBP3-AS1Q7Z2R9 100 aa5.31□□□□□ -1.56
BRCA1-219ENST00000491747 A6NN06 94 aa5.3□□□□□ -1.56
BRCA1-219ENST00000491747 C4orf48Q5BLP8 95 aa5.29□□□□□ -1.56
BRCA1-219ENST00000491747 ACYP2P14621 99 aa5.28□□□□□ -1.56
BRCA1-219ENST00000491747 C8orf87E5RJ46 101 aa5.28□□□□□ -1.56
BRCA1-219ENST00000491747 SPINK1P00995 79 aa5.28□□□□□ -1.56
BRCA1-219ENST00000491747 KRTAP13-3Q3SY46 172 aa5.28□□□□□ -1.56
BRCA1-219ENST00000491747 Q5W150 140 aa5.28□□□□□ -1.56
BRCA1-219ENST00000491747 SPINK7P58062 85 aa5.27□□□□□ -1.57
BRCA1-219ENST00000491747 RPS29P62273 56 aaKnown RBP5.24□□□□□ -1.57
BRCA1-219ENST00000491747 C7orf65Q6ZTY9 151 aa5.24□□□□□ -1.57
BRCA1-219ENST00000491747 RNF213Q63HN8 5207 aa5.24□□□□□ -1.57
BRCA1-219ENST00000491747 DMAC1Q96GE9 116 aa5.23□□□□□ -1.57
BRCA1-219ENST00000491747 RBM12B-AS1Q9P1G2 102 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 693.4 ms