RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 HIST1H2BOP23527 126 aa4.24□□□□□ -1.73
SRRM1-217ENST00000490543 HIST1H2BBP33778 126 aa4.24□□□□□ -1.73
SRRM1-217ENST00000490543 HIST1H2BDP58876 126 aa4.24□□□□□ -1.73
SRRM1-217ENST00000490543 KRTDAPP60985 99 aa4.24□□□□□ -1.73
SRRM1-217ENST00000490543 HIST1H2BCP62807 126 aa4.24□□□□□ -1.73
SRRM1-217ENST00000490543 HIST2H2BEQ16778 126 aa4.24□□□□□ -1.73
SRRM1-217ENST00000490543 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.24□□□□□ -1.73
SRRM1-217ENST00000490543 MTURNQ8N3F0 131 aa4.24□□□□□ -1.73
SRRM1-217ENST00000490543 HIST1H2BHQ93079 126 aa4.24□□□□□ -1.73
SRRM1-217ENST00000490543 HIST1H2BNQ99877 126 aa4.24□□□□□ -1.73
SRRM1-217ENST00000490543 HIST1H2BMQ99879 126 aa4.24□□□□□ -1.73
SRRM1-217ENST00000490543 IGKV4-1P06312 121 aa4.23□□□□□ -1.73
SRRM1-217ENST00000490543 NDUFV3P56181 108 aaKnown RBP4.23□□□□□ -1.73
SRRM1-217ENST00000490543 A0A1W2PNM2 257 aa4.22□□□□□ -1.73
SRRM1-217ENST00000490543 SPINK7P58062 85 aa4.21□□□□□ -1.74
SRRM1-217ENST00000490543 DEFB116Q30KQ4 102 aa4.21□□□□□ -1.74
SRRM1-217ENST00000490543 H3BMG7 143 aa4.2□□□□□ -1.74
SRRM1-217ENST00000490543 BVES-AS1Q5T3Y7 98 aa4.2□□□□□ -1.74
SRRM1-217ENST00000490543 C12orf57Q99622 126 aa4.2□□□□□ -1.74
SRRM1-217ENST00000490543 IGHV6-1A0A0B4J1U7 121 aa4.19□□□□□ -1.74
SRRM1-217ENST00000490543 FAM218AQ96MZ4 157 aa4.18□□□□□ -1.74
SRRM1-217ENST00000490543 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
SRRM1-217ENST00000490543 ZCCHC13Q8WW36 166 aaKnown RBP4.17□□□□□ -1.74
SRRM1-217ENST00000490543 LINC00472Q9H8W2 130 aa4.17□□□□□ -1.74
SRRM1-217ENST00000490543 WFDC13Q8IUB5 93 aa4.16□□□□□ -1.74
SRRM1-217ENST00000490543 A6NN06 94 aa4.15□□□□□ -1.75
SRRM1-217ENST00000490543 FABP2P12104 132 aa4.15□□□□□ -1.75
SRRM1-217ENST00000490543 TRBV7-4A0A0J9YYF1 115 aa4.13□□□□□ -1.75
SRRM1-217ENST00000490543 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
SRRM1-217ENST00000490543 COA6Q5JTJ3 125 aaKnown RBP4.13□□□□□ -1.75
SRRM1-217ENST00000490543 A0A1B0GV72 72 aa4.12□□□□□ -1.75
SRRM1-217ENST00000490543 KMT2DO14686 5537 aa4.11□□□□□ -1.75
SRRM1-217ENST00000490543 A0A1B0GVX0 72 aa4.11□□□□□ -1.75
SRRM1-217ENST00000490543 H0YGX0 51 aa4.11□□□□□ -1.75
SRRM1-217ENST00000490543 SNCGO76070 127 aa4.11□□□□□ -1.75
SRRM1-217ENST00000490543 MT1BP07438 61 aa4.11□□□□□ -1.75
SRRM1-217ENST00000490543 ANKRD29Q8N6D5 301 aa4.11□□□□□ -1.75
SRRM1-217ENST00000490543 C8orf87E5RJ46 101 aa4.1□□□□□ -1.75
SRRM1-217ENST00000490543 RAB37Q96AX2 223 aa4.1□□□□□ -1.75
SRRM1-217ENST00000490543 HIST1H4GQ99525 98 aa4.1□□□□□ -1.75
SRRM1-217ENST00000490543 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
SRRM1-217ENST00000490543 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
SRRM1-217ENST00000490543 H1FX-AS1Q4G0G2 97 aa4.08□□□□□ -1.76
SRRM1-217ENST00000490543 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
SRRM1-217ENST00000490543 TRACP01848 142 aa4.07□□□□□ -1.76
SRRM1-217ENST00000490543 CCKP06307 115 aa4.07□□□□□ -1.76
SRRM1-217ENST00000490543 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
SRRM1-217ENST00000490543 A0A1B0GX51 115 aa4.05□□□□□ -1.76
SRRM1-217ENST00000490543 HSBP1L1C9JCN9 74 aa4.05□□□□□ -1.76
SRRM1-217ENST00000490543 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
SRRM1-217ENST00000490543 LYRM7Q5U5X0 104 aa4.04□□□□□ -1.76
SRRM1-217ENST00000490543 A0A0B4J2C4 111 aa4.03□□□□□ -1.76
SRRM1-217ENST00000490543 KRTAP19-8Q3LI54 63 aa4.03□□□□□ -1.76
SRRM1-217ENST00000490543 Q5VV11 94 aa4.03□□□□□ -1.76
SRRM1-217ENST00000490543 VPS25Q9BRG1 176 aa4.02□□□□□ -1.77
SRRM1-217ENST00000490543 ORMDL1Q9P0S3 153 aa4.02□□□□□ -1.77
SRRM1-217ENST00000490543 IGKV3D-7A0A0C4DH55 119 aa4.01□□□□□ -1.77
SRRM1-217ENST00000490543 COX8AP10176 69 aa4.01□□□□□ -1.77
SRRM1-217ENST00000490543 HIST1H2BLQ99880 126 aa4.01□□□□□ -1.77
SRRM1-217ENST00000490543 C8orf17Q9NRJ1 99 aa4□□□□□ -1.77
SRRM1-217ENST00000490543 PRO1854Q9UHT4 67 aa4□□□□□ -1.77
SRRM1-217ENST00000490543 J3KT08 172 aa3.99□□□□□ -1.77
SRRM1-217ENST00000490543 TMEM256-PLSCR3K7ERE1 68 aa3.99□□□□□ -1.77
SRRM1-217ENST00000490543 HIST3H2BBQ8N257 126 aa3.99□□□□□ -1.77
SRRM1-217ENST00000490543 SPRR2GQ9BYE4 73 aa3.99□□□□□ -1.77
SRRM1-217ENST00000490543 FAM236AA0A1B0GUQ0 79 aa3.98□□□□□ -1.77
SRRM1-217ENST00000490543 FAM236BA0A1B0GV22 79 aa3.98□□□□□ -1.77
SRRM1-217ENST00000490543 DLEU1O43261 78 aa3.98□□□□□ -1.77
SRRM1-217ENST00000490543 DNAL4O96015 105 aa3.98□□□□□ -1.77
SRRM1-217ENST00000490543 C14orf144Q96I85 54 aa3.98□□□□□ -1.77
SRRM1-217ENST00000490543 NDUFB1O75438 58 aa3.97□□□□□ -1.77
SRRM1-217ENST00000490543 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
SRRM1-217ENST00000490543 H3BQ85 93 aa3.96□□□□□ -1.78
SRRM1-217ENST00000490543 C5orf47Q569G3 176 aa3.96□□□□□ -1.78
SRRM1-217ENST00000490543 Q6ZVQ6 151 aa3.96□□□□□ -1.78
SRRM1-217ENST00000490543 DSCR8Q96T75 97 aa3.96□□□□□ -1.78
SRRM1-217ENST00000490543 HIGD1BQ9P298 99 aa3.96□□□□□ -1.78
SRRM1-217ENST00000490543 SPRR2EP22531 72 aa3.95□□□□□ -1.78
SRRM1-217ENST00000490543 S100A2P29034 98 aa3.95□□□□□ -1.78
SRRM1-217ENST00000490543 SPRR2BP35325 72 aa3.95□□□□□ -1.78
SRRM1-217ENST00000490543 SPRR2AP35326 72 aa3.95□□□□□ -1.78
SRRM1-217ENST00000490543 FXYD2P54710 66 aa3.95□□□□□ -1.78
SRRM1-217ENST00000490543 Q6ZQT0 140 aa3.95□□□□□ -1.78
SRRM1-217ENST00000490543 C2orf91Q6ZV80 131 aa3.95□□□□□ -1.78
SRRM1-217ENST00000490543 CEND1Q8N111 149 aa3.95□□□□□ -1.78
SRRM1-217ENST00000490543 RBM3P98179 157 aaKnown RBP3.94□□□□□ -1.78
SRRM1-217ENST00000490543 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
SRRM1-217ENST00000490543 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
SRRM1-217ENST00000490543 PSMB2P49721 201 aa3.92□□□□□ -1.78
SRRM1-217ENST00000490543 C4orf26Q17RF5 130 aa3.91□□□□□ -1.78
SRRM1-217ENST00000490543 Q5W150 140 aa3.91□□□□□ -1.78
SRRM1-217ENST00000490543 MRPL34Q9BQ48 92 aaKnown RBP3.91□□□□□ -1.78
SRRM1-217ENST00000490543 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.79
SRRM1-217ENST00000490543 C9JAW5 83 aa3.9□□□□□ -1.79
SRRM1-217ENST00000490543 K7ERJ3 54 aa3.9□□□□□ -1.79
SRRM1-217ENST00000490543 PRR15Q8IV56 129 aa3.9□□□□□ -1.79
SRRM1-217ENST00000490543 TMEM254Q8TBM7 123 aa3.89□□□□□ -1.79
SRRM1-217ENST00000490543 IMUPQ9GZP8 106 aa3.89□□□□□ -1.79
SRRM1-217ENST00000490543 NDUFS5O43920 106 aa3.88□□□□□ -1.79
SRRM1-217ENST00000490543 SPATA45Q537H7 98 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms