RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, humanhuman

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-204ENST00000490444 DEFB110Q30KQ9 67 aa0.58□□□□□ -2.32
PUM3-204ENST00000490444 RPL39P5Q59GN2 51 aa0.57□□□□□ -2.32
PUM3-204ENST00000490444 NBASA2RRP1 2371 aa0.56□□□□□ -2.32
PUM3-204ENST00000490444 WNK1Q9H4A3 2382 aa0.56□□□□□ -2.32
PUM3-204ENST00000490444 NAV2Q8IVL1 2488 aa0.56□□□□□ -2.32
PUM3-204ENST00000490444 PIEZO1Q92508 2521 aa0.56□□□□□ -2.32
PUM3-204ENST00000490444 DEFB108AA8MXU0 73 aa0.56□□□□□ -2.32
PUM3-204ENST00000490444 PKD1L1Q8TDX9 2849 aa0.56□□□□□ -2.32
PUM3-204ENST00000490444 ACACAQ13085 2346 aa0.55□□□□□ -2.32
PUM3-204ENST00000490444 CHD8Q9HCK8 2581 aa0.55□□□□□ -2.32
PUM3-204ENST00000490444 TENM3Q9P273 2699 aa0.55□□□□□ -2.32
PUM3-204ENST00000490444 CCDC168Q8NDH2 2452 aa0.54□□□□□ -2.32
PUM3-204ENST00000490444 CREBBPQ92793 2442 aa0.54□□□□□ -2.32
PUM3-204ENST00000490444 HIVEP3Q5T1R4 2406 aa0.53□□□□□ -2.33
PUM3-204ENST00000490444 UNC79Q9P2D8 2635 aa0.52□□□□□ -2.33
PUM3-204ENST00000490444 NF1P21359 2839 aa0.52□□□□□ -2.33
PUM3-204ENST00000490444 FRYQ5TBA9 3013 aa0.52□□□□□ -2.33
PUM3-204ENST00000490444 RHPN1-AS1Q9BWJ2 59 aa0.52□□□□□ -2.33
PUM3-204ENST00000490444 SPTBN4Q9H254 2564 aa0.52□□□□□ -2.33
PUM3-204ENST00000490444 GCN1Q92616 2671 aaKnown RBP0.52□□□□□ -2.33
PUM3-204ENST00000490444 DMBT1Q9UGM3 2413 aaPredicted RBP0.52□□□□□ -2.33
PUM3-204ENST00000490444 NOTCH1P46531 2555 aa0.51□□□□□ -2.33
PUM3-204ENST00000490444 ZZEF1O43149 2961 aa0.51□□□□□ -2.33
PUM3-204ENST00000490444 H3BUX3 64 aa0.51□□□□□ -2.33
PUM3-204ENST00000490444 APC2O95996 2303 aa0.51□□□□□ -2.33
PUM3-204ENST00000490444 ACANP16112 2415 aa0.51□□□□□ -2.33
PUM3-204ENST00000490444 DCHS2Q6V1P9 2916 aa0.51□□□□□ -2.33
PUM3-204ENST00000490444 MGAQ8IWI9 3026 aa0.51□□□□□ -2.33
PUM3-204ENST00000490444 A0A096LNI7 61 aa0.5□□□□□ -2.33
PUM3-204ENST00000490444 DMXL1Q9Y485 3027 aa0.5□□□□□ -2.33
PUM3-204ENST00000490444 BSNQ9UPA5 3926 aa0.5□□□□□ -2.33
PUM3-204ENST00000490444 FLNCQ14315 2725 aa0.5□□□□□ -2.33
PUM3-204ENST00000490444 SETXQ7Z333 2677 aaKnown RBP0.5□□□□□ -2.33
PUM3-204ENST00000490444 LYSTQ99698 3801 aa0.49□□□□□ -2.33
PUM3-204ENST00000490444 CRYBG3Q68DQ2 2970 aa0.49□□□□□ -2.33
PUM3-204ENST00000490444 USP24Q9UPU5 2620 aa0.49□□□□□ -2.33
PUM3-204ENST00000490444 SETD2Q9BYW2 2564 aaPredicted RBP0.49□□□□□ -2.33
PUM3-204ENST00000490444 TNXBP22105 4242 aa0.49□□□□□ -2.33
PUM3-204ENST00000490444 PTPN13Q12923 2485 aa0.48□□□□□ -2.33
PUM3-204ENST00000490444 SPENQ96T58 3664 aaKnown RBP0.48□□□□□ -2.33
PUM3-204ENST00000490444 ITPR3Q14573 2671 aa0.48□□□□□ -2.33
PUM3-204ENST00000490444 APELAP0DMC3 54 aa0.48□□□□□ -2.33
PUM3-204ENST00000490444 SPRR2DP22532 72 aa0.48□□□□□ -2.33
PUM3-204ENST00000490444 MTORP42345 2549 aa0.48□□□□□ -2.33
PUM3-204ENST00000490444 TACC2O95359 2948 aa0.48□□□□□ -2.33
PUM3-204ENST00000490444 FRAS1Q86XX4 4008 aa0.48□□□□□ -2.33
PUM3-204ENST00000490444 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
PUM3-204ENST00000490444 MAP1BP46821 2468 aaKnown RBP0.47□□□□□ -2.33
PUM3-204ENST00000490444 COL7A1Q02388 2944 aa0.47□□□□□ -2.33
PUM3-204ENST00000490444 ZFHX4Q86UP3 3567 aa0.47□□□□□ -2.33
PUM3-204ENST00000490444 HTN1P15515 57 aa0.47□□□□□ -2.33
PUM3-204ENST00000490444 KRTAP8-1Q8IUC2 63 aa0.47□□□□□ -2.33
PUM3-204ENST00000490444 COL12A1Q99715 3063 aa0.47□□□□□ -2.33
PUM3-204ENST00000490444 STAB1Q9NY15 2570 aa0.47□□□□□ -2.33
PUM3-204ENST00000490444 CELSR3Q9NYQ7 3312 aa0.46□□□□□ -2.34
PUM3-204ENST00000490444 ANKRD11Q6UB99 2663 aaPredicted RBP0.46□□□□□ -2.34
PUM3-204ENST00000490444 NSD1Q96L73 2696 aaPredicted RBP0.46□□□□□ -2.34
PUM3-204ENST00000490444 ANK2Q01484 3957 aa0.46□□□□□ -2.34
PUM3-204ENST00000490444 SPRR2BP35325 72 aa0.46□□□□□ -2.34
PUM3-204ENST00000490444 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
PUM3-204ENST00000490444 ZNF469Q96JG9 3925 aaPredicted RBP0.46□□□□□ -2.34
PUM3-204ENST00000490444 LRRK2Q5S007 2527 aa0.45□□□□□ -2.34
PUM3-204ENST00000490444 FLNBO75369 2602 aaKnown RBP0.45□□□□□ -2.34
PUM3-204ENST00000490444 USP9YO00507 2555 aaPredicted RBP0.45□□□□□ -2.34
PUM3-204ENST00000490444 DEFB136Q30KP8 78 aa0.45□□□□□ -2.34
PUM3-204ENST00000490444 KALRNO60229 2985 aa0.45□□□□□ -2.34
PUM3-204ENST00000490444 NBEAL2Q6ZNJ1 2754 aa0.44□□□□□ -2.34
PUM3-204ENST00000490444 DEFB1P60022 68 aa0.44□□□□□ -2.34
PUM3-204ENST00000490444 RANBP2P49792 3224 aaKnown RBP0.44□□□□□ -2.34
PUM3-204ENST00000490444 ACACBO00763 2458 aa0.43□□□□□ -2.34
PUM3-204ENST00000490444 RIF1Q5UIP0 2472 aaKnown RBP0.43□□□□□ -2.34
PUM3-204ENST00000490444 CUBNO60494 3623 aa0.43□□□□□ -2.34
PUM3-204ENST00000490444 NBEAQ8NFP9 2946 aa0.43□□□□□ -2.34
PUM3-204ENST00000490444 FAT2Q9NYQ8 4349 aa0.43□□□□□ -2.34
PUM3-204ENST00000490444 MT1AP04731 61 aa0.43□□□□□ -2.34
PUM3-204ENST00000490444 NCOR2Q9Y618 2525 aa0.43□□□□□ -2.34
PUM3-204ENST00000490444 SONP18583 2426 aaKnown RBP0.43□□□□□ -2.34
PUM3-204ENST00000490444 KMT2AQ03164 3969 aa0.42□□□□□ -2.34
PUM3-204ENST00000490444 SPRR2AP35326 72 aa0.42□□□□□ -2.34
PUM3-204ENST00000490444 DEFB124Q8NES8 71 aa0.42□□□□□ -2.34
PUM3-204ENST00000490444 FAM186AA6NE01 2351 aa0.42□□□□□ -2.34
PUM3-204ENST00000490444 UTP20O75691 2785 aaKnown RBP0.42□□□□□ -2.34
PUM3-204ENST00000490444 HRNRQ86YZ3 2850 aaPredicted RBP0.42□□□□□ -2.34
PUM3-204ENST00000490444 NBPF19A0A087WUL8 3843 aa0.41□□□□□ -2.34
PUM3-204ENST00000490444 EPG5Q9HCE0 2579 aa0.41□□□□□ -2.34
PUM3-204ENST00000490444 ZANQ9Y493 2812 aa0.41□□□□□ -2.34
PUM3-204ENST00000490444 CFAP54Q96N23 3096 aa0.41□□□□□ -2.34
PUM3-204ENST00000490444 KRTAP6-2Q3LI66 62 aa0.41□□□□□ -2.34
PUM3-204ENST00000490444 VPS13BQ7Z7G8 4022 aa0.41□□□□□ -2.34
PUM3-204ENST00000490444 CACNA1AO00555 2505 aa0.4□□□□□ -2.34
PUM3-204ENST00000490444 RELNP78509 3460 aa0.4□□□□□ -2.34
PUM3-204ENST00000490444 SMR3BP02814 79 aaPredicted RBP0.4□□□□□ -2.35
PUM3-204ENST00000490444 ANKHD1Q8IWZ3 2542 aaKnown RBP0.4□□□□□ -2.35
PUM3-204ENST00000490444 HIVEP1P15822 2718 aa0.4□□□□□ -2.35
PUM3-204ENST00000490444 PRKDCP78527 4128 aaKnown RBP0.4□□□□□ -2.35
PUM3-204ENST00000490444 VPS13DQ5THJ4 4388 aa0.39□□□□□ -2.35
PUM3-204ENST00000490444 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
PUM3-204ENST00000490444 DEFB133Q30KQ1 61 aa0.39□□□□□ -2.35
PUM3-204ENST00000490444 TRIOO75962 3097 aa0.39□□□□□ -2.35
PUM3-204ENST00000490444 SPG11Q96JI7 2443 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms