RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 COL5A1-AS1Q5SY13 56 aa5.22□□□□□ -1.57
HDAC6-233ENST00000489352 FAM218AQ96MZ4 157 aa5.22□□□□□ -1.57
HDAC6-233ENST00000489352 LITAFQ99732 161 aa5.22□□□□□ -1.57
HDAC6-233ENST00000489352 NHP2Q9NX24 153 aaKnown RBP5.22□□□□□ -1.57
HDAC6-233ENST00000489352 FXYD2P54710 66 aa5.2□□□□□ -1.58
HDAC6-233ENST00000489352 ADAMTSL4-AS1Q5T5F5 129 aa5.2□□□□□ -1.58
HDAC6-233ENST00000489352 MUSTN1Q8IVN3 82 aa5.2□□□□□ -1.58
HDAC6-233ENST00000489352 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
HDAC6-233ENST00000489352 LINC00308Q8TCZ7 52 aa5.19□□□□□ -1.58
HDAC6-233ENST00000489352 SPINK7P58062 85 aa5.18□□□□□ -1.58
HDAC6-233ENST00000489352 FAM236AA0A1B0GUQ0 79 aa5.17□□□□□ -1.58
HDAC6-233ENST00000489352 FAM236BA0A1B0GV22 79 aa5.17□□□□□ -1.58
HDAC6-233ENST00000489352 A4D1N5 150 aa5.17□□□□□ -1.58
HDAC6-233ENST00000489352 OCIAD2Q56VL3 154 aa5.17□□□□□ -1.58
HDAC6-233ENST00000489352 RAB37Q96AX2 223 aa5.17□□□□□ -1.58
HDAC6-233ENST00000489352 A0A0B4J2C4 111 aa5.16□□□□□ -1.58
HDAC6-233ENST00000489352 SIGMAR1Q99720 223 aa5.16□□□□□ -1.58
HDAC6-233ENST00000489352 WFDC13Q8IUB5 93 aa5.15□□□□□ -1.59
HDAC6-233ENST00000489352 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
HDAC6-233ENST00000489352 K7ERJ3 54 aa5.14□□□□□ -1.59
HDAC6-233ENST00000489352 TAX1BP3O14907 124 aa5.14□□□□□ -1.59
HDAC6-233ENST00000489352 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
HDAC6-233ENST00000489352 PRO1854Q9UHT4 67 aa5.14□□□□□ -1.59
HDAC6-233ENST00000489352 C9orf118A6NHY6 69 aa5.13□□□□□ -1.59
HDAC6-233ENST00000489352 LYRM7Q5U5X0 104 aa5.11□□□□□ -1.59
HDAC6-233ENST00000489352 H3BUT2 72 aa5.1□□□□□ -1.59
HDAC6-233ENST00000489352 FABP2P12104 132 aa5.09□□□□□ -1.59
HDAC6-233ENST00000489352 PSMB2P49721 201 aa5.09□□□□□ -1.59
HDAC6-233ENST00000489352 H1FX-AS1Q4G0G2 97 aa5.09□□□□□ -1.59
HDAC6-233ENST00000489352 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
HDAC6-233ENST00000489352 A0A1W2PPM0 123 aa5.08□□□□□ -1.6
HDAC6-233ENST00000489352 COX6CP09669 75 aa5.08□□□□□ -1.6
HDAC6-233ENST00000489352 VAMP3Q15836 100 aa5.08□□□□□ -1.6
HDAC6-233ENST00000489352 A0A087WSZ3 146 aa5.07□□□□□ -1.6
HDAC6-233ENST00000489352 SCGB1C2P0DMR2 95 aa5.07□□□□□ -1.6
HDAC6-233ENST00000489352 Q6ZQY7 126 aa5.07□□□□□ -1.6
HDAC6-233ENST00000489352 GTF2H5Q6ZYL4 71 aa5.07□□□□□ -1.6
HDAC6-233ENST00000489352 ZCCHC13Q8WW36 166 aaKnown RBP5.07□□□□□ -1.6
HDAC6-233ENST00000489352 NAA38Q9BRA0 125 aaKnown RBP5.07□□□□□ -1.6
HDAC6-233ENST00000489352 TEN1Q86WV5 123 aa5.06□□□□□ -1.6
HDAC6-233ENST00000489352 SPRR2GQ9BYE4 73 aa5.06□□□□□ -1.6
HDAC6-233ENST00000489352 SPCS1Q9Y6A9 102 aa5.06□□□□□ -1.6
HDAC6-233ENST00000489352 K7EP34 96 aa5.05□□□□□ -1.6
HDAC6-233ENST00000489352 IGKV4-1P06312 121 aa5.05□□□□□ -1.6
HDAC6-233ENST00000489352 TRIAP1O43715 76 aa5.04□□□□□ -1.6
HDAC6-233ENST00000489352 SNCGO76070 127 aa5.04□□□□□ -1.6
HDAC6-233ENST00000489352 SMIM11BQ8TCY0 68 aa5.04□□□□□ -1.6
HDAC6-233ENST00000489352 H0YGX0 51 aa5.03□□□□□ -1.6
HDAC6-233ENST00000489352 UBE2V1Q13404 147 aa5.03□□□□□ -1.6
HDAC6-233ENST00000489352 ATXN8Q156A1 80 aa5.03□□□□□ -1.6
HDAC6-233ENST00000489352 IGHV6-1A0A0B4J1U7 121 aa5.02□□□□□ -1.61
HDAC6-233ENST00000489352 hADV29S1A0JD25 119 aa5.02□□□□□ -1.61
HDAC6-233ENST00000489352 H3BMG7 143 aa4.99□□□□□ -1.61
HDAC6-233ENST00000489352 LINC00575Q6W349 94 aa4.99□□□□□ -1.61
HDAC6-233ENST00000489352 A0A1B0GX51 115 aa4.98□□□□□ -1.61
HDAC6-233ENST00000489352 DNAL4O96015 105 aa4.98□□□□□ -1.61
HDAC6-233ENST00000489352 TRACP01848 142 aa4.98□□□□□ -1.61
HDAC6-233ENST00000489352 PPDPFLQ8WWR9 84 aa4.98□□□□□ -1.61
HDAC6-233ENST00000489352 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
HDAC6-233ENST00000489352 F8W1H4 67 aa4.97□□□□□ -1.61
HDAC6-233ENST00000489352 C9JAW5 83 aa4.95□□□□□ -1.62
HDAC6-233ENST00000489352 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.95□□□□□ -1.62
HDAC6-233ENST00000489352 DSCR8Q96T75 97 aa4.95□□□□□ -1.62
HDAC6-233ENST00000489352 VPS25Q9BRG1 176 aa4.95□□□□□ -1.62
HDAC6-233ENST00000489352 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
HDAC6-233ENST00000489352 A0A1B0GV72 72 aa4.94□□□□□ -1.62
HDAC6-233ENST00000489352 H3BT86 120 aa4.94□□□□□ -1.62
HDAC6-233ENST00000489352 SCGB1A1P11684 91 aa4.94□□□□□ -1.62
HDAC6-233ENST00000489352 DEFB116Q30KQ4 102 aa4.94□□□□□ -1.62
HDAC6-233ENST00000489352 H3BQ85 93 aa4.93□□□□□ -1.62
HDAC6-233ENST00000489352 C5orf47Q569G3 176 aa4.93□□□□□ -1.62
HDAC6-233ENST00000489352 ANKRD29Q8N6D5 301 aa4.93□□□□□ -1.62
HDAC6-233ENST00000489352 PRO0461Q9UI25 63 aa4.93□□□□□ -1.62
HDAC6-233ENST00000489352 C8orf87E5RJ46 101 aa4.92□□□□□ -1.62
HDAC6-233ENST00000489352 SMCPP49901 116 aaPredicted RBP4.92□□□□□ -1.62
HDAC6-233ENST00000489352 ORMDL1Q9P0S3 153 aa4.92□□□□□ -1.62
HDAC6-233ENST00000489352 AHNAK2Q8IVF2 5795 aa4.92□□□□□ -1.62
HDAC6-233ENST00000489352 BAALC-AS2P0C853 105 aa4.91□□□□□ -1.62
HDAC6-233ENST00000489352 TMEM256-PLSCR3K7ERE1 68 aa4.9□□□□□ -1.63
HDAC6-233ENST00000489352 ETDBQ3ZM63 59 aa4.88□□□□□ -1.63
HDAC6-233ENST00000489352 IGKV3D-7A0A0C4DH55 119 aa4.86□□□□□ -1.63
HDAC6-233ENST00000489352 A0A1B0GVX0 72 aa4.86□□□□□ -1.63
HDAC6-233ENST00000489352 J3QR89 54 aa4.86□□□□□ -1.63
HDAC6-233ENST00000489352 K7ERU9 68 aa4.86□□□□□ -1.63
HDAC6-233ENST00000489352 NDUFV3P56181 108 aaKnown RBP4.86□□□□□ -1.63
HDAC6-233ENST00000489352 KLKP1Q107X0 134 aa4.86□□□□□ -1.63
HDAC6-233ENST00000489352 JMJD7-PLA2G4BH0Y9G9 81 aa4.85□□□□□ -1.63
HDAC6-233ENST00000489352 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
HDAC6-233ENST00000489352 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
HDAC6-233ENST00000489352 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
HDAC6-233ENST00000489352 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
HDAC6-233ENST00000489352 PRR15Q8IV56 129 aa4.82□□□□□ -1.64
HDAC6-233ENST00000489352 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
HDAC6-233ENST00000489352 LINC00472Q9H8W2 130 aa4.82□□□□□ -1.64
HDAC6-233ENST00000489352 KRTAP12-2P59991 146 aa4.81□□□□□ -1.64
HDAC6-233ENST00000489352 RBM3P98179 157 aaKnown RBP4.81□□□□□ -1.64
HDAC6-233ENST00000489352 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
HDAC6-233ENST00000489352 PDE6GP18545 87 aa4.8□□□□□ -1.64
HDAC6-233ENST00000489352 LCA10Q71F78 164 aa4.79□□□□□ -1.64
HDAC6-233ENST00000489352 C14orf132Q9NPU4 83 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms