RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 VPS25Q9BRG1 176 aa5.9□□□□□ -1.46
SPEN-205ENST00000487496 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
SPEN-205ENST00000487496 NAA38Q9BRA0 125 aaKnown RBP5.88□□□□□ -1.47
SPEN-205ENST00000487496 IGHV6-1A0A0B4J1U7 121 aa5.87□□□□□ -1.47
SPEN-205ENST00000487496 C9JAW5 83 aa5.87□□□□□ -1.47
SPEN-205ENST00000487496 SMIM6P0DI80 62 aa5.87□□□□□ -1.47
SPEN-205ENST00000487496 SEC61GP60059 68 aa5.87□□□□□ -1.47
SPEN-205ENST00000487496 ATXN8Q156A1 80 aa5.87□□□□□ -1.47
SPEN-205ENST00000487496 TRBV20-1A0A075B6N2 111 aa5.84□□□□□ -1.47
SPEN-205ENST00000487496 A0A1B0GVX0 72 aa5.84□□□□□ -1.47
SPEN-205ENST00000487496 Q6ZQT0 140 aa5.84□□□□□ -1.47
SPEN-205ENST00000487496 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
SPEN-205ENST00000487496 C8orf87E5RJ46 101 aa5.83□□□□□ -1.48
SPEN-205ENST00000487496 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
SPEN-205ENST00000487496 J3KT08 172 aa5.82□□□□□ -1.48
SPEN-205ENST00000487496 CRCT1Q9UGL9 99 aa5.81□□□□□ -1.48
SPEN-205ENST00000487496 LOC110117498A0A087WWA1 95 aa5.8□□□□□ -1.48
SPEN-205ENST00000487496 TSTD3H0UI37 97 aa5.8□□□□□ -1.48
SPEN-205ENST00000487496 A0A1B0GW54 56 aa5.79□□□□□ -1.48
SPEN-205ENST00000487496 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
SPEN-205ENST00000487496 BATFQ16520 125 aa5.79□□□□□ -1.48
SPEN-205ENST00000487496 LYRM7Q5U5X0 104 aa5.79□□□□□ -1.48
SPEN-205ENST00000487496 PDE6GP18545 87 aa5.78□□□□□ -1.48
SPEN-205ENST00000487496 C14orf132Q9NPU4 83 aa5.78□□□□□ -1.48
SPEN-205ENST00000487496 NDUFB1O75438 58 aa5.77□□□□□ -1.49
SPEN-205ENST00000487496 HRES1P13985 223 aa5.77□□□□□ -1.49
SPEN-205ENST00000487496 MPLKIPQ8TAP9 179 aa5.77□□□□□ -1.49
SPEN-205ENST00000487496 FAM236DA0A1B0GTK5 79 aa5.75□□□□□ -1.49
SPEN-205ENST00000487496 LOC105371267A0A1B0GV96 52 aa5.75□□□□□ -1.49
SPEN-205ENST00000487496 A8MWP4 228 aa5.75□□□□□ -1.49
SPEN-205ENST00000487496 FAM236CP0DP71 79 aa5.75□□□□□ -1.49
SPEN-205ENST00000487496 ZCCHC13Q8WW36 166 aaKnown RBP5.74□□□□□ -1.49
SPEN-205ENST00000487496 RBM12B-AS1Q9P1G2 102 aa5.74□□□□□ -1.49
SPEN-205ENST00000487496 IGKV3D-7A0A0C4DH55 119 aa5.73□□□□□ -1.49
SPEN-205ENST00000487496 Q8N9P0 234 aaPredicted RBP5.73□□□□□ -1.49
SPEN-205ENST00000487496 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
SPEN-205ENST00000487496 C8orf17Q9NRJ1 99 aa5.73□□□□□ -1.49
SPEN-205ENST00000487496 TAX1BP3O14907 124 aa5.72□□□□□ -1.49
SPEN-205ENST00000487496 A0A1W2PPM0 123 aa5.71□□□□□ -1.5
SPEN-205ENST00000487496 NREPQ16612 68 aa5.71□□□□□ -1.5
SPEN-205ENST00000487496 H3BT86 120 aa5.7□□□□□ -1.5
SPEN-205ENST00000487496 SPINK7P58062 85 aa5.7□□□□□ -1.5
SPEN-205ENST00000487496 PRR15Q8IV56 129 aa5.7□□□□□ -1.5
SPEN-205ENST00000487496 MTURNQ8N3F0 131 aa5.69□□□□□ -1.5
SPEN-205ENST00000487496 Q6ZVQ6 151 aa5.68□□□□□ -1.5
SPEN-205ENST00000487496 MMP24-AS1A0A0U1RRL7 71 aa5.65□□□□□ -1.5
SPEN-205ENST00000487496 MT2AP02795 61 aa5.64□□□□□ -1.51
SPEN-205ENST00000487496 TMEM254Q8TBM7 123 aa5.64□□□□□ -1.51
SPEN-205ENST00000487496 MRPL34Q9BQ48 92 aaKnown RBP5.64□□□□□ -1.51
SPEN-205ENST00000487496 K7EQZ3 153 aa5.63□□□□□ -1.51
SPEN-205ENST00000487496 SPCS1Q9Y6A9 102 aa5.63□□□□□ -1.51
SPEN-205ENST00000487496 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
SPEN-205ENST00000487496 WFDC13Q8IUB5 93 aa5.61□□□□□ -1.51
SPEN-205ENST00000487496 BPY2O14599 106 aa5.6□□□□□ -1.51
SPEN-205ENST00000487496 MT1FP04733 61 aa5.6□□□□□ -1.51
SPEN-205ENST00000487496 NDUFS5O43920 106 aa5.58□□□□□ -1.52
SPEN-205ENST00000487496 USH2AO75445 5202 aa5.56□□□□□ -1.52
SPEN-205ENST00000487496 KRTAP10-10P60014 251 aa5.56□□□□□ -1.52
SPEN-205ENST00000487496 COL5A1-AS1Q5SY13 56 aa5.56□□□□□ -1.52
SPEN-205ENST00000487496 Q8N9L7 120 aa5.56□□□□□ -1.52
SPEN-205ENST00000487496 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
SPEN-205ENST00000487496 PRO0461Q9UI25 63 aa5.55□□□□□ -1.52
SPEN-205ENST00000487496 K7EP34 96 aa5.53□□□□□ -1.52
SPEN-205ENST00000487496 Q5W150 140 aa5.53□□□□□ -1.52
SPEN-205ENST00000487496 CASC2Q6XLA1 102 aa5.53□□□□□ -1.52
SPEN-205ENST00000487496 LINC00846Q9NV44 126 aa5.52□□□□□ -1.53
SPEN-205ENST00000487496 IGKV2D-30A0A075B6S6 120 aa5.51□□□□□ -1.53
SPEN-205ENST00000487496 IGKV2-30P06310 120 aa5.51□□□□□ -1.53
SPEN-205ENST00000487496 HCG22E2RYF7 251 aa5.5□□□□□ -1.53
SPEN-205ENST00000487496 UBL5Q9BZL1 73 aa5.5□□□□□ -1.53
SPEN-205ENST00000487496 SSPOA2VEC9 5147 aa5.5□□□□□ -1.53
SPEN-205ENST00000487496 H1FX-AS1Q4G0G2 97 aa5.49□□□□□ -1.53
SPEN-205ENST00000487496 C7orf65Q6ZTY9 151 aa5.49□□□□□ -1.53
SPEN-205ENST00000487496 CXCL6P80162 114 aa5.47□□□□□ -1.53
SPEN-205ENST00000487496 C5orf47Q569G3 176 aa5.47□□□□□ -1.53
SPEN-205ENST00000487496 GTF2H5Q6ZYL4 71 aa5.45□□□□□ -1.54
SPEN-205ENST00000487496 F8W1H4 67 aa5.43□□□□□ -1.54
SPEN-205ENST00000487496 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
SPEN-205ENST00000487496 C4orf26Q17RF5 130 aa5.42□□□□□ -1.54
SPEN-205ENST00000487496 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
SPEN-205ENST00000487496 ETDBQ3ZM63 59 aa5.41□□□□□ -1.54
SPEN-205ENST00000487496 V9GYY9 64 aa5.41□□□□□ -1.54
SPEN-205ENST00000487496 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
SPEN-205ENST00000487496 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
SPEN-205ENST00000487496 TP53AIP1Q9HCN2 124 aa5.36□□□□□ -1.55
SPEN-205ENST00000487496 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
SPEN-205ENST00000487496 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
SPEN-205ENST00000487496 C1orf64Q8NEQ6 169 aa5.32□□□□□ -1.56
SPEN-205ENST00000487496 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
SPEN-205ENST00000487496 KRTAP4-6Q9BYQ5 205 aa5.31□□□□□ -1.56
SPEN-205ENST00000487496 ACYP1P07311 99 aa5.29□□□□□ -1.56
SPEN-205ENST00000487496 S4R3F8 94 aa5.29□□□□□ -1.56
SPEN-205ENST00000487496 CSAG1Q6PB30 78 aa5.26□□□□□ -1.57
SPEN-205ENST00000487496 LCA10Q71F78 164 aa5.26□□□□□ -1.57
SPEN-205ENST00000487496 CYP4F30PQ9H0H9 118 aa5.26□□□□□ -1.57
SPEN-205ENST00000487496 FAM240AA0A1B0GVK7 77 aa5.25□□□□□ -1.57
SPEN-205ENST00000487496 SYNE2Q8WXH0 6885 aaKnown RBP5.24□□□□□ -1.57
SPEN-205ENST00000487496 ATP5EP2Q5VTU8 51 aa5.24□□□□□ -1.57
SPEN-205ENST00000487496 TRAV22A0A0B4J277 110 aa5.23□□□□□ -1.57
SPEN-205ENST00000487496 FAM236AA0A1B0GUQ0 79 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms