RNA–Protein interactions for RNA: ENST00000485541.1

SRRM1-214, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-214ENST00000485541 KRTAP29-1A8MX34 341 aaPredicted RBP4.68□□□□□ -1.66
SRRM1-214ENST00000485541 ATP5EP56381 51 aaPredicted RBP4.68□□□□□ -1.66
SRRM1-214ENST00000485541 C5orf47Q569G3 176 aa4.68□□□□□ -1.66
SRRM1-214ENST00000485541 SPINK6Q6UWN8 80 aa4.68□□□□□ -1.66
SRRM1-214ENST00000485541 DNAH5Q8TE73 4624 aa4.67□□□□□ -1.66
SRRM1-214ENST00000485541 H3BPC8 53 aa4.67□□□□□ -1.66
SRRM1-214ENST00000485541 TMEM254Q8TBM7 123 aa4.67□□□□□ -1.66
SRRM1-214ENST00000485541 PKD1P98161 4303 aa4.66□□□□□ -1.66
SRRM1-214ENST00000485541 DNAH11Q96DT5 4516 aa4.66□□□□□ -1.66
SRRM1-214ENST00000485541 CDK2AP2O75956 126 aa4.66□□□□□ -1.66
SRRM1-214ENST00000485541 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
SRRM1-214ENST00000485541 LIMD2Q9BT23 127 aa4.66□□□□□ -1.66
SRRM1-214ENST00000485541 SRRM2Q9UQ35 2752 aaKnown RBP4.66□□□□□ -1.66
SRRM1-214ENST00000485541 A0A0U1RQV1 116 aa4.65□□□□□ -1.67
SRRM1-214ENST00000485541 MMP24-AS1A0A0U1RRL7 71 aa4.65□□□□□ -1.67
SRRM1-214ENST00000485541 A0A1B0GVX0 72 aa4.65□□□□□ -1.67
SRRM1-214ENST00000485541 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
SRRM1-214ENST00000485541 RPS29P62273 56 aaKnown RBP4.65□□□□□ -1.67
SRRM1-214ENST00000485541 FAT2Q9NYQ8 4349 aa4.65□□□□□ -1.67
SRRM1-214ENST00000485541 C8orf87E5RJ46 101 aa4.64□□□□□ -1.67
SRRM1-214ENST00000485541 H7BZZ5 65 aa4.64□□□□□ -1.67
SRRM1-214ENST00000485541 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
SRRM1-214ENST00000485541 DEFB116Q30KQ4 102 aa4.64□□□□□ -1.67
SRRM1-214ENST00000485541 TP53AIP1Q9HCN2 124 aa4.64□□□□□ -1.67
SRRM1-214ENST00000485541 ANAPC11Q9NYG5 84 aa4.64□□□□□ -1.67
SRRM1-214ENST00000485541 hDV103S1A0JD37 113 aa4.63□□□□□ -1.67
SRRM1-214ENST00000485541 MP68P56378 58 aa4.63□□□□□ -1.67
SRRM1-214ENST00000485541 WFDC13Q8IUB5 93 aa4.63□□□□□ -1.67
SRRM1-214ENST00000485541 C8orf17Q9NRJ1 99 aa4.63□□□□□ -1.67
SRRM1-214ENST00000485541 A0A087X002 238 aa4.62□□□□□ -1.67
SRRM1-214ENST00000485541 KRTAP13-2Q52LG2 175 aa4.62□□□□□ -1.67
SRRM1-214ENST00000485541 SPAG11AQ6PDA7 123 aa4.62□□□□□ -1.67
SRRM1-214ENST00000485541 HRCT1Q6UXD1 115 aa4.62□□□□□ -1.67
SRRM1-214ENST00000485541 CYSTM1Q9H1C7 97 aa4.62□□□□□ -1.67
SRRM1-214ENST00000485541 HYDINQ4G0P3 5121 aa4.61□□□□□ -1.67
SRRM1-214ENST00000485541 FAM236DA0A1B0GTK5 79 aa4.61□□□□□ -1.67
SRRM1-214ENST00000485541 SPINK1P00995 79 aa4.61□□□□□ -1.67
SRRM1-214ENST00000485541 FAM236CP0DP71 79 aa4.61□□□□□ -1.67
SRRM1-214ENST00000485541 ZCCHC13Q8WW36 166 aaKnown RBP4.61□□□□□ -1.67
SRRM1-214ENST00000485541 SNURFQ9Y675 71 aa4.6□□□□□ -1.67
SRRM1-214ENST00000485541 TYMSOSQ8TAI1 123 aa4.59□□□□□ -1.67
SRRM1-214ENST00000485541 MRPL34Q9BQ48 92 aaKnown RBP4.59□□□□□ -1.67
SRRM1-214ENST00000485541 SACSQ9NZJ4 4579 aa4.59□□□□□ -1.67
SRRM1-214ENST00000485541 TRAV22A0A0B4J277 110 aa4.58□□□□□ -1.68
SRRM1-214ENST00000485541 IGHV6-1A0A0B4J1U7 121 aa4.57□□□□□ -1.68
SRRM1-214ENST00000485541 H0Y9P7 68 aa4.56□□□□□ -1.68
SRRM1-214ENST00000485541 KRTAP10-4P60372 401 aaPredicted RBP4.56□□□□□ -1.68
SRRM1-214ENST00000485541 C1orf195Q5TG92 126 aa4.56□□□□□ -1.68
SRRM1-214ENST00000485541 SERP1Q9Y6X1 66 aa4.56□□□□□ -1.68
SRRM1-214ENST00000485541 LINC00304Q8N9R0 145 aa4.55□□□□□ -1.68
SRRM1-214ENST00000485541 VPS13BQ7Z7G8 4022 aa4.55□□□□□ -1.68
SRRM1-214ENST00000485541 SPANXA2-OT1Q8N9U9 137 aa4.54□□□□□ -1.68
SRRM1-214ENST00000485541 LINC00313P59037 77 aa4.53□□□□□ -1.68
SRRM1-214ENST00000485541 LINC00208Q96KT6 92 aa4.53□□□□□ -1.68
SRRM1-214ENST00000485541 CYP4F30PQ9H0H9 118 aa4.53□□□□□ -1.68
SRRM1-214ENST00000485541 Q8N9P0 234 aaPredicted RBP4.52□□□□□ -1.69
SRRM1-214ENST00000485541 LRP1BQ9NZR2 4599 aa4.51□□□□□ -1.69
SRRM1-214ENST00000485541 LOC101927531A0A1B0GV80 90 aa4.51□□□□□ -1.69
SRRM1-214ENST00000485541 SMR3BP02814 79 aaPredicted RBP4.51□□□□□ -1.69
SRRM1-214ENST00000485541 C1orf64Q8NEQ6 169 aa4.51□□□□□ -1.69
SRRM1-214ENST00000485541 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
SRRM1-214ENST00000485541 NDUFS5O43920 106 aa4.5□□□□□ -1.69
SRRM1-214ENST00000485541 PRR26Q8N8Z3 221 aa4.5□□□□□ -1.69
SRRM1-214ENST00000485541 DYNC1H1Q14204 4646 aaKnown RBP4.49□□□□□ -1.69
SRRM1-214ENST00000485541 RYR2Q92736 4967 aa4.48□□□□□ -1.69
SRRM1-214ENST00000485541 NOTCH2NLQ7Z3S9 236 aa4.48□□□□□ -1.69
SRRM1-214ENST00000485541 KRTAP16-1A8MUX0 517 aa4.47□□□□□ -1.69
SRRM1-214ENST00000485541 KRTAP13-3Q3SY46 172 aa4.47□□□□□ -1.69
SRRM1-214ENST00000485541 IGLV7-46A0A075B6I9 117 aa4.46□□□□□ -1.7
SRRM1-214ENST00000485541 SMIM26A0A096LP01 95 aa4.46□□□□□ -1.7
SRRM1-214ENST00000485541 PKHD1L1Q86WI1 4243 aa4.45□□□□□ -1.7
SRRM1-214ENST00000485541 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
SRRM1-214ENST00000485541 APOBP04114 4563 aaKnown RBP4.45□□□□□ -1.7
SRRM1-214ENST00000485541 Q5VSD8 79 aa4.44□□□□□ -1.7
SRRM1-214ENST00000485541 OXTP01178 125 aa4.43□□□□□ -1.7
SRRM1-214ENST00000485541 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
SRRM1-214ENST00000485541 FLG2Q5D862 2391 aaPredicted RBP4.42□□□□□ -1.7
SRRM1-214ENST00000485541 KRTAP10-8P60410 259 aa4.41□□□□□ -1.7
SRRM1-214ENST00000485541 Q5W150 140 aa4.41□□□□□ -1.7
SRRM1-214ENST00000485541 IGKV2-30P06310 120 aa4.4□□□□□ -1.71
SRRM1-214ENST00000485541 FP248Q71RG6 208 aaPredicted RBP4.4□□□□□ -1.71
SRRM1-214ENST00000485541 Q8N1X5 172 aa4.39□□□□□ -1.71
SRRM1-214ENST00000485541 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
SRRM1-214ENST00000485541 KMT2CQ8NEZ4 4911 aaKnown RBP4.39□□□□□ -1.71
SRRM1-214ENST00000485541 A8MUU9 505 aa4.38□□□□□ -1.71
SRRM1-214ENST00000485541 V9GYY9 64 aa4.38□□□□□ -1.71
SRRM1-214ENST00000485541 PCOTHQ58A44 107 aa4.37□□□□□ -1.71
SRRM1-214ENST00000485541 Q1T7F1 81 aa4.35□□□□□ -1.71
SRRM1-214ENST00000485541 C7orf65Q6ZTY9 151 aa4.35□□□□□ -1.71
SRRM1-214ENST00000485541 PRR4Q16378 134 aa4.34□□□□□ -1.71
SRRM1-214ENST00000485541 Q75L30 129 aa4.34□□□□□ -1.71
SRRM1-214ENST00000485541 COA5Q86WW8 74 aa4.34□□□□□ -1.71
SRRM1-214ENST00000485541 DMAC1Q96GE9 116 aa4.34□□□□□ -1.71
SRRM1-214ENST00000485541 ACYP2P14621 99 aa4.33□□□□□ -1.72
SRRM1-214ENST00000485541 HRES1P13985 223 aa4.32□□□□□ -1.72
SRRM1-214ENST00000485541 FAT1Q14517 4588 aa4.32□□□□□ -1.72
SRRM1-214ENST00000485541 A8MUN3 132 aa4.31□□□□□ -1.72
SRRM1-214ENST00000485541 HSPG2P98160 4391 aa4.31□□□□□ -1.72
SRRM1-214ENST00000485541 IGKV2D-30A0A075B6S6 120 aa4.29□□□□□ -1.72
SRRM1-214ENST00000485541 DMBT1Q9UGM3 2413 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms