RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 A8MWP4 228 aa5.72□□□□□ -1.49
HDAC6-226ENST00000483656 OXTP01178 125 aa5.71□□□□□ -1.5
HDAC6-226ENST00000483656 PRR15Q8IV56 129 aa5.71□□□□□ -1.5
HDAC6-226ENST00000483656 SCGB1A1P11684 91 aa5.69□□□□□ -1.5
HDAC6-226ENST00000483656 FAM236AA0A1B0GUQ0 79 aa5.68□□□□□ -1.5
HDAC6-226ENST00000483656 FAM236BA0A1B0GV22 79 aa5.68□□□□□ -1.5
HDAC6-226ENST00000483656 A0A1B0GVX0 72 aa5.68□□□□□ -1.5
HDAC6-226ENST00000483656 KRTAP29-1A8MX34 341 aaPredicted RBP5.68□□□□□ -1.5
HDAC6-226ENST00000483656 NDUFB1O75438 58 aa5.67□□□□□ -1.5
HDAC6-226ENST00000483656 NOTCH2NLQ7Z3S9 236 aa5.67□□□□□ -1.5
HDAC6-226ENST00000483656 IGHV6-1A0A0B4J1U7 121 aa5.66□□□□□ -1.5
HDAC6-226ENST00000483656 MMP24-AS1A0A0U1RRL7 71 aa5.66□□□□□ -1.5
HDAC6-226ENST00000483656 HCG22E2RYF7 251 aa5.65□□□□□ -1.5
HDAC6-226ENST00000483656 RETNLBQ9BQ08 111 aa5.65□□□□□ -1.5
HDAC6-226ENST00000483656 C8orf17Q9NRJ1 99 aa5.65□□□□□ -1.5
HDAC6-226ENST00000483656 WFDC13Q8IUB5 93 aa5.63□□□□□ -1.51
HDAC6-226ENST00000483656 CASC2Q6XLA1 102 aa5.61□□□□□ -1.51
HDAC6-226ENST00000483656 hDV103S1A0JD37 113 aa5.6□□□□□ -1.51
HDAC6-226ENST00000483656 C8orf87E5RJ46 101 aa5.6□□□□□ -1.51
HDAC6-226ENST00000483656 KRTAP16-1A8MUX0 517 aa5.59□□□□□ -1.51
HDAC6-226ENST00000483656 J3QL48 77 aa5.59□□□□□ -1.51
HDAC6-226ENST00000483656 ATOX1O00244 68 aa5.59□□□□□ -1.51
HDAC6-226ENST00000483656 LINC00313P59037 77 aa5.59□□□□□ -1.51
HDAC6-226ENST00000483656 TMEM254Q8TBM7 123 aa5.58□□□□□ -1.52
HDAC6-226ENST00000483656 OCR1Q9BZK8 76 aa5.58□□□□□ -1.52
HDAC6-226ENST00000483656 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
HDAC6-226ENST00000483656 MRPL34Q9BQ48 92 aaKnown RBP5.57□□□□□ -1.52
HDAC6-226ENST00000483656 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
HDAC6-226ENST00000483656 ANAPC13Q9BS18 74 aa5.56□□□□□ -1.52
HDAC6-226ENST00000483656 TRAV7A0A075B6U4 112 aa5.55□□□□□ -1.52
HDAC6-226ENST00000483656 C9orf92A6NGG3 77 aa5.54□□□□□ -1.52
HDAC6-226ENST00000483656 SERP2Q8N6R1 65 aa5.54□□□□□ -1.52
HDAC6-226ENST00000483656 IGLV7-46A0A075B6I9 117 aa5.53□□□□□ -1.52
HDAC6-226ENST00000483656 PCP4P48539 62 aa5.53□□□□□ -1.52
HDAC6-226ENST00000483656 SMIM20Q8N5G0 67 aa5.53□□□□□ -1.52
HDAC6-226ENST00000483656 Q8N9P0 234 aaPredicted RBP5.53□□□□□ -1.52
HDAC6-226ENST00000483656 KRTAP9-2Q9BYQ4 174 aa5.53□□□□□ -1.52
HDAC6-226ENST00000483656 COX7CP15954 63 aa5.51□□□□□ -1.53
HDAC6-226ENST00000483656 KRTAP13-3Q3SY46 172 aa5.51□□□□□ -1.53
HDAC6-226ENST00000483656 PRR4Q16378 134 aa5.5□□□□□ -1.53
HDAC6-226ENST00000483656 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
HDAC6-226ENST00000483656 UQCRQO14949 82 aa5.49□□□□□ -1.53
HDAC6-226ENST00000483656 NDUFS5O43920 106 aa5.49□□□□□ -1.53
HDAC6-226ENST00000483656 A8MUU9 505 aa5.48□□□□□ -1.53
HDAC6-226ENST00000483656 Q5W150 140 aa5.48□□□□□ -1.53
HDAC6-226ENST00000483656 C20orf166-AS1Q96NR2 134 aa5.48□□□□□ -1.53
HDAC6-226ENST00000483656 TP53AIP1Q9HCN2 124 aa5.48□□□□□ -1.53
HDAC6-226ENST00000483656 C5orf47Q569G3 176 aa5.45□□□□□ -1.54
HDAC6-226ENST00000483656 LPAP08519 4548 aa5.45□□□□□ -1.54
HDAC6-226ENST00000483656 RNF213Q63HN8 5207 aa5.44□□□□□ -1.54
HDAC6-226ENST00000483656 H0Y9P7 68 aa5.44□□□□□ -1.54
HDAC6-226ENST00000483656 TPRXLQ17RH7 258 aa5.44□□□□□ -1.54
HDAC6-226ENST00000483656 XP32Q5T750 250 aa5.44□□□□□ -1.54
HDAC6-226ENST00000483656 C20orf197Q8N268 126 aa5.44□□□□□ -1.54
HDAC6-226ENST00000483656 A0A0U1RQV1 116 aa5.43□□□□□ -1.54
HDAC6-226ENST00000483656 Q75L30 129 aa5.43□□□□□ -1.54
HDAC6-226ENST00000483656 CYSTM1Q9H1C7 97 aa5.43□□□□□ -1.54
HDAC6-226ENST00000483656 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
HDAC6-226ENST00000483656 TRAV22A0A0B4J277 110 aa5.42□□□□□ -1.54
HDAC6-226ENST00000483656 ZCCHC13Q8WW36 166 aaKnown RBP5.42□□□□□ -1.54
HDAC6-226ENST00000483656 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
HDAC6-226ENST00000483656 MP68P56378 58 aa5.4□□□□□ -1.54
HDAC6-226ENST00000483656 RPL37P61927 97 aaKnown RBP5.4□□□□□ -1.54
HDAC6-226ENST00000483656 LINC00208Q96KT6 92 aa5.4□□□□□ -1.54
HDAC6-226ENST00000483656 LRP2P98164 4655 aa5.4□□□□□ -1.55
HDAC6-226ENST00000483656 KLKP1Q107X0 134 aa5.39□□□□□ -1.55
HDAC6-226ENST00000483656 H3BPC8 53 aa5.38□□□□□ -1.55
HDAC6-226ENST00000483656 C1orf64Q8NEQ6 169 aa5.38□□□□□ -1.55
HDAC6-226ENST00000483656 MUC17Q685J3 4493 aa5.37□□□□□ -1.55
HDAC6-226ENST00000483656 IGKV2-30P06310 120 aa5.35□□□□□ -1.55
HDAC6-226ENST00000483656 LOC101927531A0A1B0GV80 90 aa5.34□□□□□ -1.55
HDAC6-226ENST00000483656 H7BZZ5 65 aa5.34□□□□□ -1.55
HDAC6-226ENST00000483656 CYP4F30PQ9H0H9 118 aa5.34□□□□□ -1.55
HDAC6-226ENST00000483656 ATP11AUNQ6ZP68 121 aa5.32□□□□□ -1.56
HDAC6-226ENST00000483656 IGKV2D-30A0A075B6S6 120 aa5.31□□□□□ -1.56
HDAC6-226ENST00000483656 NDUFC1O43677 76 aa5.3□□□□□ -1.56
HDAC6-226ENST00000483656 PCOTHQ58A44 107 aa5.3□□□□□ -1.56
HDAC6-226ENST00000483656 SPINK7P58062 85 aa5.28□□□□□ -1.56
HDAC6-226ENST00000483656 C7orf65Q6ZTY9 151 aa5.27□□□□□ -1.57
HDAC6-226ENST00000483656 HRES1P13985 223 aa5.25□□□□□ -1.57
HDAC6-226ENST00000483656 TMEM258P61165 79 aa5.24□□□□□ -1.57
HDAC6-226ENST00000483656 LCE2DQ5TA82 110 aaPredicted RBP5.24□□□□□ -1.57
HDAC6-226ENST00000483656 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
HDAC6-226ENST00000483656 SPANXA2-OT1Q8N9U9 137 aa5.22□□□□□ -1.57
HDAC6-226ENST00000483656 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
HDAC6-226ENST00000483656 FAM236DA0A1B0GTK5 79 aa5.21□□□□□ -1.58
HDAC6-226ENST00000483656 FAM236CP0DP71 79 aa5.21□□□□□ -1.58
HDAC6-226ENST00000483656 MUC2Q02817 5179 aa5.21□□□□□ -1.58
HDAC6-226ENST00000483656 KRTAP3-3Q9BYR6 98 aa5.19□□□□□ -1.58
HDAC6-226ENST00000483656 KRTAP3-2Q9BYR7 98 aa5.19□□□□□ -1.58
HDAC6-226ENST00000483656 C4orf26Q17RF5 130 aa5.18□□□□□ -1.58
HDAC6-226ENST00000483656 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
HDAC6-226ENST00000483656 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
HDAC6-226ENST00000483656 ATP5EP56381 51 aaPredicted RBP5.16□□□□□ -1.58
HDAC6-226ENST00000483656 MPLKIPQ8TAP9 179 aa5.16□□□□□ -1.58
HDAC6-226ENST00000483656 DMAC1Q96GE9 116 aa5.15□□□□□ -1.59
HDAC6-226ENST00000483656 COX6B2Q6YFQ2 88 aa5.14□□□□□ -1.59
HDAC6-226ENST00000483656 CRCT1Q9UGL9 99 aa5.12□□□□□ -1.59
HDAC6-226ENST00000483656 KRTAP19-2Q3LHN2 52 aa5.09□□□□□ -1.59
HDAC6-226ENST00000483656 SERP1Q9Y6X1 66 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms