RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 hDV103S1A0JD37 113 aa7.67□□□□□ -1.18
CPNE1-225ENST00000483495 CDK2AP2O75956 126 aa7.67□□□□□ -1.18
CPNE1-225ENST00000483495 C8orf17Q9NRJ1 99 aa7.67□□□□□ -1.18
CPNE1-225ENST00000483495 IGHV6-1A0A0B4J1U7 121 aa7.64□□□□□ -1.19
CPNE1-225ENST00000483495 SERP1Q9Y6X1 66 aa7.64□□□□□ -1.19
CPNE1-225ENST00000483495 TYMSOSQ8TAI1 123 aa7.64□□□□□ -1.19
CPNE1-225ENST00000483495 MP68P56378 58 aa7.63□□□□□ -1.19
CPNE1-225ENST00000483495 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
CPNE1-225ENST00000483495 LIMD2Q9BT23 127 aa7.62□□□□□ -1.19
CPNE1-225ENST00000483495 C1orf195Q5TG92 126 aa7.61□□□□□ -1.19
CPNE1-225ENST00000483495 H3BPC8 53 aa7.6□□□□□ -1.19
CPNE1-225ENST00000483495 SPINK1P00995 79 aa7.6□□□□□ -1.19
CPNE1-225ENST00000483495 NOTCH2NLQ7Z3S9 236 aa7.6□□□□□ -1.19
CPNE1-225ENST00000483495 PRR26Q8N8Z3 221 aa7.59□□□□□ -1.19
CPNE1-225ENST00000483495 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
CPNE1-225ENST00000483495 MRPL34Q9BQ48 92 aaKnown RBP7.58□□□□□ -1.2
CPNE1-225ENST00000483495 TP53AIP1Q9HCN2 124 aa7.58□□□□□ -1.2
CPNE1-225ENST00000483495 FAT1Q14517 4588 aa7.58□□□□□ -1.2
CPNE1-225ENST00000483495 C8orf87E5RJ46 101 aa7.58□□□□□ -1.2
CPNE1-225ENST00000483495 RPS29P62273 56 aaKnown RBP7.57□□□□□ -1.2
CPNE1-225ENST00000483495 H0Y9P7 68 aa7.55□□□□□ -1.2
CPNE1-225ENST00000483495 RYR3Q15413 4870 aa7.55□□□□□ -1.2
CPNE1-225ENST00000483495 OXTP01178 125 aa7.55□□□□□ -1.2
CPNE1-225ENST00000483495 SPAG11AQ6PDA7 123 aa7.55□□□□□ -1.2
CPNE1-225ENST00000483495 LINC00304Q8N9R0 145 aa7.55□□□□□ -1.2
CPNE1-225ENST00000483495 TRAV22A0A0B4J277 110 aa7.54□□□□□ -1.2
CPNE1-225ENST00000483495 LINC00208Q96KT6 92 aa7.53□□□□□ -1.2
CPNE1-225ENST00000483495 LINC00313P59037 77 aa7.51□□□□□ -1.21
CPNE1-225ENST00000483495 PKHD1L1Q86WI1 4243 aa7.51□□□□□ -1.21
CPNE1-225ENST00000483495 SMIM26A0A096LP01 95 aa7.5□□□□□ -1.21
CPNE1-225ENST00000483495 FAM229AH3BQW9 127 aa7.5□□□□□ -1.21
CPNE1-225ENST00000483495 NDUFS5O43920 106 aa7.5□□□□□ -1.21
CPNE1-225ENST00000483495 C1orf64Q8NEQ6 169 aa7.49□□□□□ -1.21
CPNE1-225ENST00000483495 Q8N9P0 234 aaPredicted RBP7.47□□□□□ -1.21
CPNE1-225ENST00000483495 KRTAP16-1A8MUX0 517 aa7.46□□□□□ -1.22
CPNE1-225ENST00000483495 CYP4F30PQ9H0H9 118 aa7.46□□□□□ -1.22
CPNE1-225ENST00000483495 SPANXA2-OT1Q8N9U9 137 aa7.45□□□□□ -1.22
CPNE1-225ENST00000483495 HSPG2P98160 4391 aa7.45□□□□□ -1.22
CPNE1-225ENST00000483495 KRTAP13-3Q3SY46 172 aa7.45□□□□□ -1.22
CPNE1-225ENST00000483495 Q5VSD8 79 aa7.44□□□□□ -1.22
CPNE1-225ENST00000483495 RYR1P21817 5038 aa7.44□□□□□ -1.22
CPNE1-225ENST00000483495 Q5W150 140 aa7.42□□□□□ -1.22
CPNE1-225ENST00000483495 LOC101927531A0A1B0GV80 90 aa7.38□□□□□ -1.23
CPNE1-225ENST00000483495 FP248Q71RG6 208 aaPredicted RBP7.38□□□□□ -1.23
CPNE1-225ENST00000483495 KRTAP10-8P60410 259 aa7.37□□□□□ -1.23
CPNE1-225ENST00000483495 C4orf26Q17RF5 130 aa7.37□□□□□ -1.23
CPNE1-225ENST00000483495 KRTAP17-1Q9BYP8 105 aa7.36□□□□□ -1.23
CPNE1-225ENST00000483495 PRR4Q16378 134 aa7.36□□□□□ -1.23
CPNE1-225ENST00000483495 IGLV7-46A0A075B6I9 117 aa7.34□□□□□ -1.23
CPNE1-225ENST00000483495 PCOTHQ58A44 107 aa7.33□□□□□ -1.24
CPNE1-225ENST00000483495 Q8N1X5 172 aa7.33□□□□□ -1.24
CPNE1-225ENST00000483495 TNXBP22105 4242 aa7.32□□□□□ -1.24
CPNE1-225ENST00000483495 KIAA1109Q2LD37 5005 aa7.3□□□□□ -1.24
CPNE1-225ENST00000483495 FLG2Q5D862 2391 aaPredicted RBP7.29□□□□□ -1.24
CPNE1-225ENST00000483495 LRP1Q07954 4544 aaKnown RBP7.29□□□□□ -1.24
CPNE1-225ENST00000483495 MPLKIPQ8TAP9 179 aa7.28□□□□□ -1.24
CPNE1-225ENST00000483495 IGKV2-30P06310 120 aa7.28□□□□□ -1.24
CPNE1-225ENST00000483495 EPPK1P58107 5090 aaKnown RBP7.27□□□□□ -1.25
CPNE1-225ENST00000483495 Q1T7F1 81 aa7.27□□□□□ -1.25
CPNE1-225ENST00000483495 SVIPQ8NHG7 77 aa7.27□□□□□ -1.25
CPNE1-225ENST00000483495 RETNLBQ9BQ08 111 aa7.27□□□□□ -1.25
CPNE1-225ENST00000483495 FAT3Q8TDW7 4589 aa7.26□□□□□ -1.25
CPNE1-225ENST00000483495 C20orf166-AS1Q96NR2 134 aa7.26□□□□□ -1.25
CPNE1-225ENST00000483495 V9GYY9 64 aa7.26□□□□□ -1.25
CPNE1-225ENST00000483495 A8MUU9 505 aa7.25□□□□□ -1.25
CPNE1-225ENST00000483495 C9orf92A6NGG3 77 aa7.23□□□□□ -1.25
CPNE1-225ENST00000483495 MT1HL1P0DM35 61 aa7.22□□□□□ -1.25
CPNE1-225ENST00000483495 COA5Q86WW8 74 aa7.21□□□□□ -1.25
CPNE1-225ENST00000483495 HRES1P13985 223 aa7.2□□□□□ -1.26
CPNE1-225ENST00000483495 IGKV2D-30A0A075B6S6 120 aa7.17□□□□□ -1.26
CPNE1-225ENST00000483495 Q75L30 129 aa7.16□□□□□ -1.26
CPNE1-225ENST00000483495 C7orf65Q6ZTY9 151 aa7.15□□□□□ -1.27
CPNE1-225ENST00000483495 DMAC1Q96GE9 116 aa7.15□□□□□ -1.27
CPNE1-225ENST00000483495 ACYP2P14621 99 aa7.14□□□□□ -1.27
CPNE1-225ENST00000483495 MYCBP2O75592 4640 aa7.14□□□□□ -1.27
CPNE1-225ENST00000483495 DMBT1Q9UGM3 2413 aaPredicted RBP7.11□□□□□ -1.27
CPNE1-225ENST00000483495 PSPHP1O15172 72 aa7.1□□□□□ -1.27
CPNE1-225ENST00000483495 PRO0628Q9UI54 55 aa7.09□□□□□ -1.27
CPNE1-225ENST00000483495 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.28
CPNE1-225ENST00000483495 BRK1Q8WUW1 75 aa7.07□□□□□ -1.28
CPNE1-225ENST00000483495 A8MUN3 132 aa7.07□□□□□ -1.28
CPNE1-225ENST00000483495 RPL37P61927 97 aaKnown RBP7.04□□□□□ -1.28
CPNE1-225ENST00000483495 XP32Q5T750 250 aa7.04□□□□□ -1.28
CPNE1-225ENST00000483495 LINC01558Q9Y6Z2 57 aa7.04□□□□□ -1.28
CPNE1-225ENST00000483495 CHKB-CPT1BH3BT56 60 aa7.03□□□□□ -1.28
CPNE1-225ENST00000483495 PRR15LQ9BU68 103 aa7.03□□□□□ -1.28
CPNE1-225ENST00000483495 SPINK7P58062 85 aa7.02□□□□□ -1.28
CPNE1-225ENST00000483495 Q5VV11 94 aa7.02□□□□□ -1.28
CPNE1-225ENST00000483495 ATP11AUNQ6ZP68 121 aa7□□□□□ -1.29
CPNE1-225ENST00000483495 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
CPNE1-225ENST00000483495 BIRC6Q9NR09 4857 aa6.95□□□□□ -1.3
CPNE1-225ENST00000483495 ABCA13Q86UQ4 5058 aa6.93□□□□□ -1.3
CPNE1-225ENST00000483495 HERC2O95714 4834 aa6.93□□□□□ -1.3
CPNE1-225ENST00000483495 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
CPNE1-225ENST00000483495 A6NED7 52 aa6.9□□□□□ -1.3
CPNE1-225ENST00000483495 COX6B2Q6YFQ2 88 aa6.89□□□□□ -1.31
CPNE1-225ENST00000483495 A0A1B0GU69 56 aa6.85□□□□□ -1.31
CPNE1-225ENST00000483495 J3QL48 77 aa6.85□□□□□ -1.31
CPNE1-225ENST00000483495 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
CPNE1-225ENST00000483495 CDC42SE1Q9NRR8 79 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms