RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 ACYP1P07311 99 aa10.7□□□□□ -0.7
VPS36-204ENST00000480923 NREPQ16612 68 aa10.69□□□□□ -0.7
VPS36-204ENST00000480923 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
VPS36-204ENST00000480923 FAM240AA0A1B0GVK7 77 aa10.68□□□□□ -0.7
VPS36-204ENST00000480923 Q75L30 129 aa10.68□□□□□ -0.7
VPS36-204ENST00000480923 ATP11AUNQ6ZP68 121 aa10.67□□□□□ -0.7
VPS36-204ENST00000480923 LINC00846Q9NV44 126 aa10.67□□□□□ -0.7
VPS36-204ENST00000480923 UBL5Q9BZL1 73 aa10.66□□□□□ -0.7
VPS36-204ENST00000480923 LCE2CQ5TA81 110 aa10.65□□□□□ -0.7
VPS36-204ENST00000480923 LINC00472Q9H8W2 130 aa10.65□□□□□ -0.7
VPS36-204ENST00000480923 KRTAP19-2Q3LHN2 52 aa10.64□□□□□ -0.71
VPS36-204ENST00000480923 IGKV4-1P06312 121 aa10.63□□□□□ -0.71
VPS36-204ENST00000480923 DSCR10P59022 87 aa10.62□□□□□ -0.71
VPS36-204ENST00000480923 Q6ZVQ6 151 aa10.62□□□□□ -0.71
VPS36-204ENST00000480923 J3KT08 172 aa10.6□□□□□ -0.71
VPS36-204ENST00000480923 K7ERU9 68 aa10.6□□□□□ -0.71
VPS36-204ENST00000480923 DEFB116Q30KQ4 102 aa10.59□□□□□ -0.71
VPS36-204ENST00000480923 C20orf166-AS1Q96NR2 134 aa10.59□□□□□ -0.71
VPS36-204ENST00000480923 A8MUU9 505 aa10.56□□□□□ -0.72
VPS36-204ENST00000480923 BPY2O14599 106 aa10.55□□□□□ -0.72
VPS36-204ENST00000480923 LINC00313P59037 77 aa10.55□□□□□ -0.72
VPS36-204ENST00000480923 KRTAP9-2Q9BYQ4 174 aa10.55□□□□□ -0.72
VPS36-204ENST00000480923 COX6B2Q6YFQ2 88 aa10.54□□□□□ -0.72
VPS36-204ENST00000480923 MT1HP80294 61 aa10.53□□□□□ -0.72
VPS36-204ENST00000480923 NDUFB1O75438 58 aa10.51□□□□□ -0.73
VPS36-204ENST00000480923 IGHV6-1A0A0B4J1U7 121 aa10.5□□□□□ -0.73
VPS36-204ENST00000480923 A8MWP4 228 aa10.49□□□□□ -0.73
VPS36-204ENST00000480923 NOTCH2NLQ7Z3S9 236 aa10.48□□□□□ -0.73
VPS36-204ENST00000480923 KRTAP16-1A8MUX0 517 aa10.47□□□□□ -0.73
VPS36-204ENST00000480923 CXCL6P80162 114 aa10.47□□□□□ -0.73
VPS36-204ENST00000480923 LINC00643Q86TS7 51 aa10.47□□□□□ -0.73
VPS36-204ENST00000480923 ATP5EP2Q5VTU8 51 aa10.46□□□□□ -0.73
VPS36-204ENST00000480923 A0A1B0GVX0 72 aa10.45□□□□□ -0.74
VPS36-204ENST00000480923 IGKV3D-7A0A0C4DH55 119 aa10.44□□□□□ -0.74
VPS36-204ENST00000480923 PRR15Q8IV56 129 aa10.43□□□□□ -0.74
VPS36-204ENST00000480923 C8orf87E5RJ46 101 aa10.42□□□□□ -0.74
VPS36-204ENST00000480923 K7EQZ3 153 aa10.4□□□□□ -0.74
VPS36-204ENST00000480923 M0R2T5 61 aa10.4□□□□□ -0.74
VPS36-204ENST00000480923 Q8N9L7 120 aa10.38□□□□□ -0.75
VPS36-204ENST00000480923 C8orf17Q9NRJ1 99 aa10.34□□□□□ -0.75
VPS36-204ENST00000480923 KRTAP10-6P60371 365 aaPredicted RBP10.32□□□□□ -0.76
VPS36-204ENST00000480923 HIST1H4AP62805 103 aaKnown RBP10.3□□□□□ -0.76
VPS36-204ENST00000480923 MMP24-AS1A0A0U1RRL7 71 aa10.29□□□□□ -0.76
VPS36-204ENST00000480923 LORP23490 312 aaPredicted RBP10.29□□□□□ -0.76
VPS36-204ENST00000480923 LCE2DQ5TA82 110 aaPredicted RBP10.29□□□□□ -0.76
VPS36-204ENST00000480923 hDV103S1A0JD37 113 aa10.26□□□□□ -0.77
VPS36-204ENST00000480923 FLGP20930 4061 aaPredicted RBP10.26□□□□□ -0.77
VPS36-204ENST00000480923 HCG22E2RYF7 251 aa10.25□□□□□ -0.77
VPS36-204ENST00000480923 MT-ATP8P03928 68 aa10.24□□□□□ -0.77
VPS36-204ENST00000480923 CASC2Q6XLA1 102 aa10.24□□□□□ -0.77
VPS36-204ENST00000480923 TMEM254Q8TBM7 123 aa10.24□□□□□ -0.77
VPS36-204ENST00000480923 WFDC13Q8IUB5 93 aa10.23□□□□□ -0.77
VPS36-204ENST00000480923 ZCCHC13Q8WW36 166 aaKnown RBP10.23□□□□□ -0.77
VPS36-204ENST00000480923 IMUPQ9GZP8 106 aa10.22□□□□□ -0.77
VPS36-204ENST00000480923 FAM236DA0A1B0GTK5 79 aa10.21□□□□□ -0.77
VPS36-204ENST00000480923 FAM236CP0DP71 79 aa10.21□□□□□ -0.77
VPS36-204ENST00000480923 Q8N9P0 234 aaPredicted RBP10.21□□□□□ -0.77
VPS36-204ENST00000480923 MRPL34Q9BQ48 92 aaKnown RBP10.21□□□□□ -0.77
VPS36-204ENST00000480923 HRES1P13985 223 aa10.19□□□□□ -0.78
VPS36-204ENST00000480923 RBM12B-AS1Q9P1G2 102 aa10.19□□□□□ -0.78
VPS36-204ENST00000480923 A0A087WVE0 104 aa10.18□□□□□ -0.78
VPS36-204ENST00000480923 KRTAP9-6A0A140TA67 174 aa10.16□□□□□ -0.78
VPS36-204ENST00000480923 MPLKIPQ8TAP9 179 aa10.14□□□□□ -0.79
VPS36-204ENST00000480923 NDUFS5O43920 106 aa10.13□□□□□ -0.79
VPS36-204ENST00000480923 SPINK7P58062 85 aa10.12□□□□□ -0.79
VPS36-204ENST00000480923 TP53AIP1Q9HCN2 124 aa10.05□□□□□ -0.8
VPS36-204ENST00000480923 SCGB1A1P11684 91 aa10.03□□□□□ -0.8
VPS36-204ENST00000480923 FSIP2Q5CZC0 6907 aa10.02□□□□□ -0.8
VPS36-204ENST00000480923 FAM236AA0A1B0GUQ0 79 aa10□□□□□ -0.81
VPS36-204ENST00000480923 FAM236BA0A1B0GV22 79 aa10□□□□□ -0.81
VPS36-204ENST00000480923 CRCT1Q9UGL9 99 aa10□□□□□ -0.81
VPS36-204ENST00000480923 KRTAP9-8Q9BYQ0 159 aa9.96□□□□□ -0.82
VPS36-204ENST00000480923 UQCRQO14949 82 aa9.95□□□□□ -0.82
VPS36-204ENST00000480923 Q5W150 140 aa9.93□□□□□ -0.82
VPS36-204ENST00000480923 OCR1Q9BZK8 76 aa9.92□□□□□ -0.82
VPS36-204ENST00000480923 ATOX1O00244 68 aa9.9□□□□□ -0.82
VPS36-204ENST00000480923 SMIM20Q8N5G0 67 aa9.9□□□□□ -0.82
VPS36-204ENST00000480923 TRAV22A0A0B4J277 110 aa9.87□□□□□ -0.83
VPS36-204ENST00000480923 IGKV2D-30A0A075B6S6 120 aa9.86□□□□□ -0.83
VPS36-204ENST00000480923 IGKV2-30P06310 120 aa9.86□□□□□ -0.83
VPS36-204ENST00000480923 MT2AP02795 61 aa9.85□□□□□ -0.83
VPS36-204ENST00000480923 TRAV7A0A075B6U4 112 aa9.83□□□□□ -0.84
VPS36-204ENST00000480923 H0Y9P7 68 aa9.83□□□□□ -0.84
VPS36-204ENST00000480923 C5orf47Q569G3 176 aa9.83□□□□□ -0.84
VPS36-204ENST00000480923 C7orf65Q6ZTY9 151 aa9.82□□□□□ -0.84
VPS36-204ENST00000480923 MP68P56378 58 aa9.81□□□□□ -0.84
VPS36-204ENST00000480923 MT1FP04733 61 aa9.78□□□□□ -0.84
VPS36-204ENST00000480923 KRTAP10-10P60014 251 aa9.77□□□□□ -0.85
VPS36-204ENST00000480923 LOC101927531A0A1B0GV80 90 aa9.76□□□□□ -0.85
VPS36-204ENST00000480923 H1FX-AS1Q4G0G2 97 aa9.75□□□□□ -0.85
VPS36-204ENST00000480923 SERP2Q8N6R1 65 aa9.75□□□□□ -0.85
VPS36-204ENST00000480923 H3BPC8 53 aa9.74□□□□□ -0.85
VPS36-204ENST00000480923 C1orf64Q8NEQ6 169 aa9.74□□□□□ -0.85
VPS36-204ENST00000480923 LINC00208Q96KT6 92 aa9.73□□□□□ -0.85
VPS36-204ENST00000480923 CYP4F30PQ9H0H9 118 aa9.7□□□□□ -0.86
VPS36-204ENST00000480923 C4orf26Q17RF5 130 aa9.67□□□□□ -0.86
VPS36-204ENST00000480923 USH2AO75445 5202 aa9.66□□□□□ -0.86
VPS36-204ENST00000480923 ANAPC13Q9BS18 74 aa9.66□□□□□ -0.86
VPS36-204ENST00000480923 KRTAP9-3Q9BYQ3 159 aa9.65□□□□□ -0.86
VPS36-204ENST00000480923 COX7CP15954 63 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms