RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 TRAV22A0A0B4J277 110 aa16.46■□□□□ 0.23
CHKB-208ENST00000479003 LINC00208Q96KT6 92 aa16.46■□□□□ 0.23
CHKB-208ENST00000479003 H0Y9P7 68 aa16.46■□□□□ 0.23
CHKB-208ENST00000479003 H3BPC8 53 aa16.46■□□□□ 0.23
CHKB-208ENST00000479003 MOBPQ13875 183 aa16.45■□□□□ 0.22
CHKB-208ENST00000479003 LRP1BQ9NZR2 4599 aa16.44■□□□□ 0.22
CHKB-208ENST00000479003 RYR3Q15413 4870 aa16.44■□□□□ 0.22
CHKB-208ENST00000479003 PMAIP1Q13794 54 aa16.38■□□□□ 0.21
CHKB-208ENST00000479003 ASB16-AS1Q495Z4 193 aa16.38■□□□□ 0.21
CHKB-208ENST00000479003 ANAPC11Q9NYG5 84 aa16.37■□□□□ 0.21
CHKB-208ENST00000479003 DYNC1H1Q14204 4646 aaKnown RBP16.37■□□□□ 0.21
CHKB-208ENST00000479003 PRR4Q16378 134 aa16.33■□□□□ 0.2
CHKB-208ENST00000479003 C8orf17Q9NRJ1 99 aa16.32■□□□□ 0.2
CHKB-208ENST00000479003 IGLV7-43P04211 117 aa16.31■□□□□ 0.2
CHKB-208ENST00000479003 SPANXA2-OT1Q8N9U9 137 aa16.31■□□□□ 0.2
CHKB-208ENST00000479003 A0A1B0GVX0 72 aa16.28■□□□□ 0.2
CHKB-208ENST00000479003 TP53AIP1Q9HCN2 124 aa16.27■□□□□ 0.19
CHKB-208ENST00000479003 PSPHP1O15172 72 aa16.24■□□□□ 0.19
CHKB-208ENST00000479003 IGHV6-1A0A0B4J1U7 121 aa16.23■□□□□ 0.19
CHKB-208ENST00000479003 CDK2AP2O75956 126 aa16.22■□□□□ 0.19
CHKB-208ENST00000479003 VPS13BQ7Z7G8 4022 aa16.22■□□□□ 0.19
CHKB-208ENST00000479003 LIMD2Q9BT23 127 aa16.21■□□□□ 0.18
CHKB-208ENST00000479003 APOBP04114 4563 aaKnown RBP16.18■□□□□ 0.18
CHKB-208ENST00000479003 MRPL34Q9BQ48 92 aaKnown RBP16.15■□□□□ 0.18
CHKB-208ENST00000479003 A8MUN3 132 aa16.13■□□□□ 0.17
CHKB-208ENST00000479003 CD164Q04900 197 aa16.13■□□□□ 0.17
CHKB-208ENST00000479003 Q5VV11 94 aa16.12■□□□□ 0.17
CHKB-208ENST00000479003 A0A087X002 238 aa16.1■□□□□ 0.17
CHKB-208ENST00000479003 SSBP3-AS1Q7Z2R9 100 aa16.1■□□□□ 0.17
CHKB-208ENST00000479003 NOTCH2NLQ7Z3S9 236 aa16.1■□□□□ 0.17
CHKB-208ENST00000479003 NDUFS5O43920 106 aa16.09■□□□□ 0.17
CHKB-208ENST00000479003 IGLV7-46A0A075B6I9 117 aa16.06■□□□□ 0.16
CHKB-208ENST00000479003 SMR3BP02814 79 aaPredicted RBP16.06■□□□□ 0.16
CHKB-208ENST00000479003 Q8N9P0 234 aaPredicted RBP16.06■□□□□ 0.16
CHKB-208ENST00000479003 SPINK6Q6UWN8 80 aa16.04■□□□□ 0.16
CHKB-208ENST00000479003 PCOTHQ58A44 107 aa16■□□□□ 0.15
CHKB-208ENST00000479003 FAT1Q14517 4588 aa16■□□□□ 0.15
CHKB-208ENST00000479003 CHKB-CPT1BH3BT56 60 aa15.97■□□□□ 0.15
CHKB-208ENST00000479003 Q75L30 129 aa15.96■□□□□ 0.15
CHKB-208ENST00000479003 LOC101927531A0A1B0GV80 90 aa15.95■□□□□ 0.14
CHKB-208ENST00000479003 ATP11AUNQ6ZP68 121 aa15.92■□□□□ 0.14
CHKB-208ENST00000479003 C8orf87E5RJ46 101 aa15.91■□□□□ 0.14
CHKB-208ENST00000479003 PRR15LQ9BU68 103 aa15.91■□□□□ 0.14
CHKB-208ENST00000479003 COA5Q86WW8 74 aa15.9■□□□□ 0.14
CHKB-208ENST00000479003 KRTAP13-2Q52LG2 175 aa15.89■□□□□ 0.13
CHKB-208ENST00000479003 KTN1-AS1Q86SY8 53 aa15.89■□□□□ 0.13
CHKB-208ENST00000479003 KRTAP10-4P60372 401 aaPredicted RBP15.86■□□□□ 0.13
CHKB-208ENST00000479003 KRTAP13-3Q3SY46 172 aa15.86■□□□□ 0.13
CHKB-208ENST00000479003 EPPK1P58107 5090 aaKnown RBP15.85■□□□□ 0.13
CHKB-208ENST00000479003 KRTAP1-4P0C5Y4 121 aa15.84■□□□□ 0.13
CHKB-208ENST00000479003 Q5W150 140 aa15.84■□□□□ 0.13
CHKB-208ENST00000479003 HSPG2P98160 4391 aa15.83■□□□□ 0.12
CHKB-208ENST00000479003 CDC42SE1Q9NRR8 79 aa15.77■□□□□ 0.11
CHKB-208ENST00000479003 A6NED7 52 aa15.76■□□□□ 0.11
CHKB-208ENST00000479003 LINC00313P59037 77 aa15.76■□□□□ 0.11
CHKB-208ENST00000479003 RYR1P21817 5038 aa15.75■□□□□ 0.11
CHKB-208ENST00000479003 A8MU10 97 aa15.75■□□□□ 0.11
CHKB-208ENST00000479003 LINC01558Q9Y6Z2 57 aa15.74■□□□□ 0.11
CHKB-208ENST00000479003 LCA10Q71F78 164 aa15.73■□□□□ 0.11
CHKB-208ENST00000479003 PLA2G1BP04054 148 aaKnown RBP15.71■□□□□ 0.11
CHKB-208ENST00000479003 KIAA1109Q2LD37 5005 aa15.69■□□□□ 0.1
CHKB-208ENST00000479003 A6NN06 94 aa15.68■□□□□ 0.1
CHKB-208ENST00000479003 HRES1P13985 223 aa15.68■□□□□ 0.1
CHKB-208ENST00000479003 SPTSSBQ8NFR3 76 aa15.68■□□□□ 0.1
CHKB-208ENST00000479003 FAM229AH3BQW9 127 aa15.65■□□□□ 0.1
CHKB-208ENST00000479003 Q5VSD8 79 aa15.62■□□□□ 0.09
CHKB-208ENST00000479003 KRTAP17-1Q9BYP8 105 aa15.62■□□□□ 0.09
CHKB-208ENST00000479003 KRTAP16-1A8MUX0 517 aa15.59■□□□□ 0.09
CHKB-208ENST00000479003 RBM12B-AS1Q9P1G2 102 aa15.59■□□□□ 0.09
CHKB-208ENST00000479003 PRR26Q8N8Z3 221 aa15.58■□□□□ 0.08
CHKB-208ENST00000479003 PKHD1L1Q86WI1 4243 aa15.54■□□□□ 0.08
CHKB-208ENST00000479003 C7orf65Q6ZTY9 151 aa15.54■□□□□ 0.08
CHKB-208ENST00000479003 TYMSOSQ8TAI1 123 aa15.54■□□□□ 0.08
CHKB-208ENST00000479003 C4orf48Q5BLP8 95 aa15.52■□□□□ 0.08
CHKB-208ENST00000479003 SPAG11AQ6PDA7 123 aa15.52■□□□□ 0.08
CHKB-208ENST00000479003 IGKV2-30P06310 120 aa15.5■□□□□ 0.07
CHKB-208ENST00000479003 RETNLBQ9BQ08 111 aa15.49■□□□□ 0.07
CHKB-208ENST00000479003 SPINK1P00995 79 aa15.49■□□□□ 0.07
CHKB-208ENST00000479003 ACYP2P14621 99 aa15.47■□□□□ 0.07
CHKB-208ENST00000479003 DMAC1Q96GE9 116 aa15.44■□□□□ 0.06
CHKB-208ENST00000479003 Q8N1X5 172 aa15.41■□□□□ 0.06
CHKB-208ENST00000479003 LRP1Q07954 4544 aaKnown RBP15.41■□□□□ 0.06
CHKB-208ENST00000479003 LINC00304Q8N9R0 145 aa15.35■□□□□ 0.05
CHKB-208ENST00000479003 RPS29P62273 56 aaKnown RBP15.34■□□□□ 0.05
CHKB-208ENST00000479003 SPINK7P58062 85 aa15.32■□□□□ 0.04
CHKB-208ENST00000479003 FLG2Q5D862 2391 aaPredicted RBP15.3■□□□□ 0.04
CHKB-208ENST00000479003 TNXBP22105 4242 aa15.27■□□□□ 0.03
CHKB-208ENST00000479003 MYCBP2O75592 4640 aa15.26■□□□□ 0.03
CHKB-208ENST00000479003 IGKV2D-30A0A075B6S6 120 aa15.25■□□□□ 0.03
CHKB-208ENST00000479003 FAT3Q8TDW7 4589 aa15.24■□□□□ 0.03
CHKB-208ENST00000479003 KRTAP4-5Q9BYR2 181 aa15.18■□□□□ 0.02
CHKB-208ENST00000479003 KRTAP10-8P60410 259 aa15.17■□□□□ 0.02
CHKB-208ENST00000479003 BIRC6Q9NR09 4857 aa15.15■□□□□ 0.02
CHKB-208ENST00000479003 MT1HL1P0DM35 61 aa15.03■□□□□ -0
CHKB-208ENST00000479003 HERC2O95714 4834 aa14.98□□□□□ -0.01
CHKB-208ENST00000479003 DMBT1Q9UGM3 2413 aaPredicted RBP14.98□□□□□ -0.01
CHKB-208ENST00000479003 A0A1B0GU69 56 aa14.98□□□□□ -0.01
CHKB-208ENST00000479003 ABCA13Q86UQ4 5058 aa14.98□□□□□ -0.01
CHKB-208ENST00000479003 SPATA8Q6RVD6 105 aa14.97□□□□□ -0.01
CHKB-208ENST00000479003 A8MUU9 505 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms