RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 C3P01024 1663 aa0.85□□□□□ -2.27
SMARCA1-204ENST00000478420 SERF2P84101 59 aa0.85□□□□□ -2.27
SMARCA1-204ENST00000478420 DNAH14Q0VDD8 3507 aa0.85□□□□□ -2.27
SMARCA1-204ENST00000478420 DEFB105AQ8NG35 78 aa0.85□□□□□ -2.27
SMARCA1-204ENST00000478420 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
SMARCA1-204ENST00000478420 KMT2DO14686 5537 aa0.85□□□□□ -2.27
SMARCA1-204ENST00000478420 ANK2Q01484 3957 aa0.85□□□□□ -2.27
SMARCA1-204ENST00000478420 HIVEP3Q5T1R4 2406 aa0.85□□□□□ -2.27
SMARCA1-204ENST00000478420 COL12A1Q99715 3063 aa0.85□□□□□ -2.27
SMARCA1-204ENST00000478420 CRIP1P50238 77 aa0.84□□□□□ -2.27
SMARCA1-204ENST00000478420 EP300Q09472 2414 aaPredicted RBP0.84□□□□□ -2.28
SMARCA1-204ENST00000478420 NSD1Q96L73 2696 aaPredicted RBP0.83□□□□□ -2.28
SMARCA1-204ENST00000478420 IGIPA6NJ69 53 aa0.83□□□□□ -2.28
SMARCA1-204ENST00000478420 MRPL33O75394 65 aaKnown RBP0.83□□□□□ -2.28
SMARCA1-204ENST00000478420 KLK9Q2XQG4 91 aa0.83□□□□□ -2.28
SMARCA1-204ENST00000478420 NBEAQ8NFP9 2946 aa0.83□□□□□ -2.28
SMARCA1-204ENST00000478420 AGLP35573 1532 aa0.83□□□□□ -2.28
SMARCA1-204ENST00000478420 ATP7AQ04656 1500 aa0.83□□□□□ -2.28
SMARCA1-204ENST00000478420 FREM2Q5SZK8 3169 aa0.83□□□□□ -2.28
SMARCA1-204ENST00000478420 DMXL1Q9Y485 3027 aa0.83□□□□□ -2.28
SMARCA1-204ENST00000478420 APCP25054 2843 aa0.83□□□□□ -2.28
SMARCA1-204ENST00000478420 DEPDC5O75140 1603 aa0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 ABCA5Q8WWZ7 1642 aa0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 CELSR1Q9NYQ6 3014 aa0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 WNK1Q9H4A3 2382 aa0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 M0R1W7 72 aa0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 CMC2Q9NRP2 79 aa0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 CDKN2A-AS1Q9UH64 79 aa0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 MGAM2Q2M2H8 2515 aa0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 FRYLO94915 3013 aa0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 ZANQ9Y493 2812 aa0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 EPPK1P58107 5090 aaKnown RBP0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 LRBAP50851 2863 aa0.82□□□□□ -2.28
SMARCA1-204ENST00000478420 IQGAP1P46940 1657 aa0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 TRIOO75962 3097 aa0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 BSNQ9UPA5 3926 aa0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 CSMD3Q7Z407 3707 aa0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 H0YAA0 97 aa0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 PRH1P02810 166 aa0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 NIPBLQ6KC79 2804 aaeCLIP0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 KMT2CQ8NEZ4 4911 aaKnown RBP0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 C4AP0C0L4 1744 aa0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 C4BP0C0L5 1744 aa0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 NBASA2RRP1 2371 aa0.81□□□□□ -2.28
SMARCA1-204ENST00000478420 TENM2Q9NT68 2774 aa0.8□□□□□ -2.28
SMARCA1-204ENST00000478420 MXRA5Q9NR99 2828 aa0.8□□□□□ -2.28
SMARCA1-204ENST00000478420 MYO15AQ9UKN7 3530 aa0.8□□□□□ -2.28
SMARCA1-204ENST00000478420 NRXN3Q9Y4C0 1643 aa0.8□□□□□ -2.28
SMARCA1-204ENST00000478420 PLNP26678 52 aa0.8□□□□□ -2.28
SMARCA1-204ENST00000478420 WFDC13Q8IUB5 93 aa0.8□□□□□ -2.28
SMARCA1-204ENST00000478420 TOMM5Q8N4H5 51 aa0.8□□□□□ -2.28
SMARCA1-204ENST00000478420 HYDINQ4G0P3 5121 aa0.8□□□□□ -2.28
SMARCA1-204ENST00000478420 WDFY3Q8IZQ1 3526 aa0.8□□□□□ -2.28
SMARCA1-204ENST00000478420 TGP01266 2768 aa0.79□□□□□ -2.28
SMARCA1-204ENST00000478420 SAMD9LQ8IVG5 1584 aa0.79□□□□□ -2.28
SMARCA1-204ENST00000478420 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
SMARCA1-204ENST00000478420 LINC00158P58513 81 aa0.79□□□□□ -2.28
SMARCA1-204ENST00000478420 TENM3Q9P273 2699 aa0.78□□□□□ -2.28
SMARCA1-204ENST00000478420 OTOGQ6ZRI0 2925 aa0.78□□□□□ -2.28
SMARCA1-204ENST00000478420 SMIM27A0A1W2PRY6 76 aa0.78□□□□□ -2.28
SMARCA1-204ENST00000478420 LOC730098B7Z3J9 87 aa0.78□□□□□ -2.28
SMARCA1-204ENST00000478420 H0YGX0 51 aa0.78□□□□□ -2.28
SMARCA1-204ENST00000478420 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
SMARCA1-204ENST00000478420 ABRACLQ9P1F3 81 aa0.78□□□□□ -2.28
SMARCA1-204ENST00000478420 TOP2AP11388 1531 aaKnown RBP0.78□□□□□ -2.28
SMARCA1-204ENST00000478420 NBPF19A0A087WUL8 3843 aa0.78□□□□□ -2.29
SMARCA1-204ENST00000478420 PRRC2CQ9Y520 2896 aaKnown RBP0.78□□□□□ -2.29
SMARCA1-204ENST00000478420 ADGRG4Q8IZF6 3080 aa0.78□□□□□ -2.29
SMARCA1-204ENST00000478420 HERC2O95714 4834 aa0.77□□□□□ -2.29
SMARCA1-204ENST00000478420 LINC01546A6NGU7 62 aa0.77□□□□□ -2.29
SMARCA1-204ENST00000478420 LYNX1G3V0Z9 82 aa0.77□□□□□ -2.29
SMARCA1-204ENST00000478420 ALMS1Q8TCU4 4167 aa0.77□□□□□ -2.29
SMARCA1-204ENST00000478420 TOGARAM1Q9Y4F4 1720 aa0.77□□□□□ -2.29
SMARCA1-204ENST00000478420 SONP18583 2426 aaKnown RBP0.77□□□□□ -2.29
SMARCA1-204ENST00000478420 ITPR2Q14571 2701 aa0.77□□□□□ -2.29
SMARCA1-204ENST00000478420 RYR2Q92736 4967 aa0.76□□□□□ -2.29
SMARCA1-204ENST00000478420 MAP1AP78559 2803 aaPredicted RBP0.76□□□□□ -2.29
SMARCA1-204ENST00000478420 HIVEP1P15822 2718 aa0.76□□□□□ -2.29
SMARCA1-204ENST00000478420 ACANP16112 2415 aa0.76□□□□□ -2.29
SMARCA1-204ENST00000478420 FRAS1Q86XX4 4008 aa0.76□□□□□ -2.29
SMARCA1-204ENST00000478420 CSMD2Q7Z408 3487 aa0.76□□□□□ -2.29
SMARCA1-204ENST00000478420 SRRM2Q9UQ35 2752 aaKnown RBP0.76□□□□□ -2.29
SMARCA1-204ENST00000478420 ABCA13Q86UQ4 5058 aa0.76□□□□□ -2.29
SMARCA1-204ENST00000478420 HERC1Q15751 4861 aa0.76□□□□□ -2.29
SMARCA1-204ENST00000478420 DMXL2Q8TDJ6 3036 aa0.75□□□□□ -2.29
SMARCA1-204ENST00000478420 DDX60Q8IY21 1712 aaKnown RBP0.75□□□□□ -2.29
SMARCA1-204ENST00000478420 DMDP11532 3685 aa0.75□□□□□ -2.29
SMARCA1-204ENST00000478420 IQGAP2Q13576 1575 aa0.75□□□□□ -2.29
SMARCA1-204ENST00000478420 KRTAP2-3P0C7H8 128 aa0.75□□□□□ -2.29
SMARCA1-204ENST00000478420 DEFB109BQ30KR1 87 aa0.75□□□□□ -2.29
SMARCA1-204ENST00000478420 KRTAP2-4Q9BYR9 128 aa0.75□□□□□ -2.29
SMARCA1-204ENST00000478420 KRTAP2-1Q9BYU5 128 aa0.75□□□□□ -2.29
SMARCA1-204ENST00000478420 DCHS2Q6V1P9 2916 aa0.75□□□□□ -2.29
SMARCA1-204ENST00000478420 DMBT1Q9UGM3 2413 aaPredicted RBP0.75□□□□□ -2.29
SMARCA1-204ENST00000478420 CENPEQ02224 2701 aa0.74□□□□□ -2.29
SMARCA1-204ENST00000478420 SPENQ96T58 3664 aaKnown RBP0.74□□□□□ -2.29
SMARCA1-204ENST00000478420 CHD7Q9P2D1 2997 aa0.74□□□□□ -2.29
SMARCA1-204ENST00000478420 ZNF469Q96JG9 3925 aaPredicted RBP0.74□□□□□ -2.29
SMARCA1-204ENST00000478420 SPINK4O60575 86 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms