RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
LSM2-212ENST00000477182 NREPQ16612 68 aa6.42□□□□□ -1.38
LSM2-212ENST00000477182 DEFB116Q30KQ4 102 aa6.42□□□□□ -1.38
LSM2-212ENST00000477182 LINC00472Q9H8W2 130 aa6.42□□□□□ -1.38
LSM2-212ENST00000477182 LINC00846Q9NV44 126 aa6.42□□□□□ -1.38
LSM2-212ENST00000477182 FP248Q71RG6 208 aaPredicted RBP6.41□□□□□ -1.38
LSM2-212ENST00000477182 Q6ZVQ6 151 aa6.4□□□□□ -1.38
LSM2-212ENST00000477182 IGKV4-1P06312 121 aa6.39□□□□□ -1.39
LSM2-212ENST00000477182 SEC61BP60468 96 aaKnown RBP6.39□□□□□ -1.39
LSM2-212ENST00000477182 SIGMAR1Q99720 223 aa6.39□□□□□ -1.39
LSM2-212ENST00000477182 FAM240AA0A1B0GVK7 77 aa6.38□□□□□ -1.39
LSM2-212ENST00000477182 ACYP1P07311 99 aa6.38□□□□□ -1.39
LSM2-212ENST00000477182 UBL5Q9BZL1 73 aa6.38□□□□□ -1.39
LSM2-212ENST00000477182 KRTAP4-1Q9BYQ7 146 aa6.37□□□□□ -1.39
LSM2-212ENST00000477182 J3QR89 54 aa6.36□□□□□ -1.39
LSM2-212ENST00000477182 J3KT08 172 aa6.35□□□□□ -1.39
LSM2-212ENST00000477182 BPY2O14599 106 aa6.34□□□□□ -1.39
LSM2-212ENST00000477182 LCE2CQ5TA81 110 aa6.34□□□□□ -1.39
LSM2-212ENST00000477182 C9orf92A6NGG3 77 aa6.32□□□□□ -1.4
LSM2-212ENST00000477182 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
LSM2-212ENST00000477182 MT1HP80294 61 aa6.32□□□□□ -1.4
LSM2-212ENST00000477182 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
LSM2-212ENST00000477182 A8MWP4 228 aa6.31□□□□□ -1.4
LSM2-212ENST00000477182 K7ERU9 68 aa6.31□□□□□ -1.4
LSM2-212ENST00000477182 DSCR10P59022 87 aa6.31□□□□□ -1.4
LSM2-212ENST00000477182 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
LSM2-212ENST00000477182 A0A1B0GVX0 72 aa6.3□□□□□ -1.4
LSM2-212ENST00000477182 NDUFB1O75438 58 aa6.3□□□□□ -1.4
LSM2-212ENST00000477182 IGKV3D-7A0A0C4DH55 119 aa6.29□□□□□ -1.4
LSM2-212ENST00000477182 KRTAP10-6P60371 365 aaPredicted RBP6.29□□□□□ -1.4
LSM2-212ENST00000477182 K7EQZ3 153 aa6.28□□□□□ -1.4
LSM2-212ENST00000477182 Q8N9L7 120 aa6.28□□□□□ -1.4
LSM2-212ENST00000477182 NOTCH2NLQ7Z3S9 236 aa6.27□□□□□ -1.41
LSM2-212ENST00000477182 PRR15Q8IV56 129 aa6.27□□□□□ -1.41
LSM2-212ENST00000477182 LINC00313P59037 77 aa6.26□□□□□ -1.41
LSM2-212ENST00000477182 CXCL6P80162 114 aa6.26□□□□□ -1.41
LSM2-212ENST00000477182 LINC00643Q86TS7 51 aa6.26□□□□□ -1.41
LSM2-212ENST00000477182 C8orf87E5RJ46 101 aa6.25□□□□□ -1.41
LSM2-212ENST00000477182 KRTAP19-2Q3LHN2 52 aa6.24□□□□□ -1.41
LSM2-212ENST00000477182 ATP5EP2Q5VTU8 51 aa6.24□□□□□ -1.41
LSM2-212ENST00000477182 C8orf17Q9NRJ1 99 aa6.24□□□□□ -1.41
LSM2-212ENST00000477182 XP32Q5T750 250 aa6.23□□□□□ -1.41
LSM2-212ENST00000477182 MMP24-AS1A0A0U1RRL7 71 aa6.21□□□□□ -1.42
LSM2-212ENST00000477182 KRTAP16-1A8MUX0 517 aa6.21□□□□□ -1.42
LSM2-212ENST00000477182 M0R2T5 61 aa6.21□□□□□ -1.42
LSM2-212ENST00000477182 HIST1H4AP62805 103 aaKnown RBP6.18□□□□□ -1.42
LSM2-212ENST00000477182 WFDC13Q8IUB5 93 aa6.18□□□□□ -1.42
LSM2-212ENST00000477182 hDV103S1A0JD37 113 aa6.17□□□□□ -1.42
LSM2-212ENST00000477182 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
LSM2-212ENST00000477182 A8MUU9 505 aa6.16□□□□□ -1.42
LSM2-212ENST00000477182 HCG22E2RYF7 251 aa6.16□□□□□ -1.42
LSM2-212ENST00000477182 RPL37P61927 97 aaKnown RBP6.16□□□□□ -1.42
LSM2-212ENST00000477182 CASC2Q6XLA1 102 aa6.16□□□□□ -1.42
LSM2-212ENST00000477182 TMEM254Q8TBM7 123 aa6.16□□□□□ -1.42
LSM2-212ENST00000477182 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
LSM2-212ENST00000477182 MT-ATP8P03928 68 aa6.15□□□□□ -1.42
LSM2-212ENST00000477182 Q75L30 129 aa6.15□□□□□ -1.42
LSM2-212ENST00000477182 MRPL34Q9BQ48 92 aaKnown RBP6.15□□□□□ -1.42
LSM2-212ENST00000477182 A0A087WVE0 104 aa6.14□□□□□ -1.43
LSM2-212ENST00000477182 USH2AO75445 5202 aa6.12□□□□□ -1.43
LSM2-212ENST00000477182 Q8N9P0 234 aaPredicted RBP6.12□□□□□ -1.43
LSM2-212ENST00000477182 NDUFS5O43920 106 aa6.11□□□□□ -1.43
LSM2-212ENST00000477182 PCOTHQ58A44 107 aa6.1□□□□□ -1.43
LSM2-212ENST00000477182 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
LSM2-212ENST00000477182 ATP11AUNQ6ZP68 121 aa6.09□□□□□ -1.43
LSM2-212ENST00000477182 IMUPQ9GZP8 106 aa6.08□□□□□ -1.44
LSM2-212ENST00000477182 COX6B2Q6YFQ2 88 aa6.07□□□□□ -1.44
LSM2-212ENST00000477182 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
LSM2-212ENST00000477182 ZCCHC13Q8WW36 166 aaKnown RBP6.05□□□□□ -1.44
LSM2-212ENST00000477182 Q5W150 140 aa6.01□□□□□ -1.45
LSM2-212ENST00000477182 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
LSM2-212ENST00000477182 FAM236AA0A1B0GUQ0 79 aa6□□□□□ -1.45
LSM2-212ENST00000477182 FAM236BA0A1B0GV22 79 aa6□□□□□ -1.45
LSM2-212ENST00000477182 TP53AIP1Q9HCN2 124 aa6□□□□□ -1.45
LSM2-212ENST00000477182 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
LSM2-212ENST00000477182 SCGB1A1P11684 91 aa5.99□□□□□ -1.45
LSM2-212ENST00000477182 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
LSM2-212ENST00000477182 OCR1Q9BZK8 76 aa5.97□□□□□ -1.45
LSM2-212ENST00000477182 UQCRQO14949 82 aa5.96□□□□□ -1.46
LSM2-212ENST00000477182 TRAV22A0A0B4J277 110 aa5.93□□□□□ -1.46
LSM2-212ENST00000477182 SPINK7P58062 85 aa5.93□□□□□ -1.46
LSM2-212ENST00000477182 IGKV2D-30A0A075B6S6 120 aa5.92□□□□□ -1.46
LSM2-212ENST00000477182 IGKV2-30P06310 120 aa5.92□□□□□ -1.46
LSM2-212ENST00000477182 H0Y9P7 68 aa5.91□□□□□ -1.46
LSM2-212ENST00000477182 ATOX1O00244 68 aa5.91□□□□□ -1.46
LSM2-212ENST00000477182 C7orf65Q6ZTY9 151 aa5.89□□□□□ -1.47
LSM2-212ENST00000477182 SMIM20Q8N5G0 67 aa5.89□□□□□ -1.47
LSM2-212ENST00000477182 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
LSM2-212ENST00000477182 TRAV7A0A075B6U4 112 aa5.88□□□□□ -1.47
LSM2-212ENST00000477182 HRES1P13985 223 aa5.87□□□□□ -1.47
LSM2-212ENST00000477182 MP68P56378 58 aa5.87□□□□□ -1.47
LSM2-212ENST00000477182 C5orf47Q569G3 176 aa5.86□□□□□ -1.47
LSM2-212ENST00000477182 LINC00208Q96KT6 92 aa5.86□□□□□ -1.47
LSM2-212ENST00000477182 LOC101927531A0A1B0GV80 90 aa5.85□□□□□ -1.47
LSM2-212ENST00000477182 C1orf64Q8NEQ6 169 aa5.85□□□□□ -1.47
LSM2-212ENST00000477182 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
LSM2-212ENST00000477182 CYP4F30PQ9H0H9 118 aa5.84□□□□□ -1.47
LSM2-212ENST00000477182 SERP2Q8N6R1 65 aa5.83□□□□□ -1.48
LSM2-212ENST00000477182 H3BPC8 53 aa5.81□□□□□ -1.48
LSM2-212ENST00000477182 MPLKIPQ8TAP9 179 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms