RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 S100A6P06703 90 aa3.72□□□□□ -1.81
BRCA1-214ENST00000477152 LINC00846Q9NV44 126 aa3.72□□□□□ -1.81
BRCA1-214ENST00000477152 MTURNQ8N3F0 131 aa3.71□□□□□ -1.82
BRCA1-214ENST00000477152 A0A087WSZ3 146 aa3.71□□□□□ -1.82
BRCA1-214ENST00000477152 LINC00313P59037 77 aa3.71□□□□□ -1.82
BRCA1-214ENST00000477152 SIGMAR1Q99720 223 aa3.71□□□□□ -1.82
BRCA1-214ENST00000477152 H3BMG7 143 aa3.7□□□□□ -1.82
BRCA1-214ENST00000477152 FABP2P12104 132 aa3.69□□□□□ -1.82
BRCA1-214ENST00000477152 A0A0B4J2C4 111 aa3.69□□□□□ -1.82
BRCA1-214ENST00000477152 DLEU1O43261 78 aa3.69□□□□□ -1.82
BRCA1-214ENST00000477152 DNAL4O96015 105 aa3.69□□□□□ -1.82
BRCA1-214ENST00000477152 COX8AP10176 69 aa3.69□□□□□ -1.82
BRCA1-214ENST00000477152 HIST3H2BBQ8N257 126 aa3.69□□□□□ -1.82
BRCA1-214ENST00000477152 HIST1H2BLQ99880 126 aa3.69□□□□□ -1.82
BRCA1-214ENST00000477152 IGKV4-1P06312 121 aa3.67□□□□□ -1.82
BRCA1-214ENST00000477152 ANKRD29Q8N6D5 301 aa3.67□□□□□ -1.82
BRCA1-214ENST00000477152 S100A1P23297 94 aa3.67□□□□□ -1.82
BRCA1-214ENST00000477152 HIGD1BQ9P298 99 aa3.67□□□□□ -1.82
BRCA1-214ENST00000477152 TRBV7-4A0A0J9YYF1 115 aa3.66□□□□□ -1.82
BRCA1-214ENST00000477152 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-214ENST00000477152 ORMDL1Q9P0S3 153 aa3.65□□□□□ -1.82
BRCA1-214ENST00000477152 PRO1854Q9UHT4 67 aa3.65□□□□□ -1.82
BRCA1-214ENST00000477152 TMEM256-PLSCR3K7ERE1 68 aa3.65□□□□□ -1.83
BRCA1-214ENST00000477152 COX6CP09669 75 aa3.65□□□□□ -1.83
BRCA1-214ENST00000477152 C8orf87E5RJ46 101 aa3.64□□□□□ -1.83
BRCA1-214ENST00000477152 TRACP01848 142 aa3.64□□□□□ -1.83
BRCA1-214ENST00000477152 CEND1Q8N111 149 aa3.63□□□□□ -1.83
BRCA1-214ENST00000477152 PSMB2P49721 201 aa3.62□□□□□ -1.83
BRCA1-214ENST00000477152 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
BRCA1-214ENST00000477152 IGHV6-1A0A0B4J1U7 121 aa3.62□□□□□ -1.83
BRCA1-214ENST00000477152 A0A1W2PNM2 257 aa3.62□□□□□ -1.83
BRCA1-214ENST00000477152 CCKP06307 115 aa3.62□□□□□ -1.83
BRCA1-214ENST00000477152 SPATA45Q537H7 98 aa3.62□□□□□ -1.83
BRCA1-214ENST00000477152 C14orf144Q96I85 54 aa3.62□□□□□ -1.83
BRCA1-214ENST00000477152 VAMP8Q9BV40 100 aa3.62□□□□□ -1.83
BRCA1-214ENST00000477152 J3KT08 172 aa3.61□□□□□ -1.83
BRCA1-214ENST00000477152 NDUFB1O75438 58 aa3.6□□□□□ -1.83
BRCA1-214ENST00000477152 MT2AP02795 61 aa3.6□□□□□ -1.83
BRCA1-214ENST00000477152 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
BRCA1-214ENST00000477152 DSCR8Q96T75 97 aa3.6□□□□□ -1.83
BRCA1-214ENST00000477152 HRES1P13985 223 aa3.59□□□□□ -1.83
BRCA1-214ENST00000477152 LYRM7Q5U5X0 104 aa3.59□□□□□ -1.83
BRCA1-214ENST00000477152 LINC00472Q9H8W2 130 aa3.59□□□□□ -1.83
BRCA1-214ENST00000477152 A0A1B0GVX0 72 aa3.58□□□□□ -1.84
BRCA1-214ENST00000477152 A8MWP4 228 aa3.58□□□□□ -1.84
BRCA1-214ENST00000477152 VPS25Q9BRG1 176 aa3.58□□□□□ -1.84
BRCA1-214ENST00000477152 RBM3P98179 157 aaKnown RBP3.58□□□□□ -1.84
BRCA1-214ENST00000477152 ZCCHC13Q8WW36 166 aaKnown RBP3.58□□□□□ -1.84
BRCA1-214ENST00000477152 DEFB116Q30KQ4 102 aa3.57□□□□□ -1.84
BRCA1-214ENST00000477152 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
BRCA1-214ENST00000477152 A0A1B0GV72 72 aa3.56□□□□□ -1.84
BRCA1-214ENST00000477152 HSD52Q0P140 79 aa3.56□□□□□ -1.84
BRCA1-214ENST00000477152 C2orf91Q6ZV80 131 aa3.56□□□□□ -1.84
BRCA1-214ENST00000477152 MT1FP04733 61 aa3.56□□□□□ -1.84
BRCA1-214ENST00000477152 SCGB1C2P0DMR2 95 aa3.56□□□□□ -1.84
BRCA1-214ENST00000477152 SPINK7P58062 85 aa3.56□□□□□ -1.84
BRCA1-214ENST00000477152 A0A1B0GW54 56 aa3.55□□□□□ -1.84
BRCA1-214ENST00000477152 C9JAW5 83 aa3.55□□□□□ -1.84
BRCA1-214ENST00000477152 FXYD2P54710 66 aa3.54□□□□□ -1.84
BRCA1-214ENST00000477152 JMJD7-PLA2G4BH0Y9G9 81 aa3.52□□□□□ -1.85
BRCA1-214ENST00000477152 PDE6GP18545 87 aa3.52□□□□□ -1.85
BRCA1-214ENST00000477152 SEC61GP60059 68 aa3.52□□□□□ -1.85
BRCA1-214ENST00000477152 USH2AO75445 5202 aa3.51□□□□□ -1.85
BRCA1-214ENST00000477152 WFDC13Q8IUB5 93 aa3.51□□□□□ -1.85
BRCA1-214ENST00000477152 BAALC-AS2P0C853 105 aa3.51□□□□□ -1.85
BRCA1-214ENST00000477152 Q6ZQT0 140 aa3.51□□□□□ -1.85
BRCA1-214ENST00000477152 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
BRCA1-214ENST00000477152 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
BRCA1-214ENST00000477152 C8orf17Q9NRJ1 99 aa3.49□□□□□ -1.85
BRCA1-214ENST00000477152 UQCR10Q9UDW1 63 aa3.49□□□□□ -1.85
BRCA1-214ENST00000477152 IGKV3D-7A0A0C4DH55 119 aa3.49□□□□□ -1.85
BRCA1-214ENST00000477152 K7ERJ3 54 aa3.49□□□□□ -1.85
BRCA1-214ENST00000477152 ATXN8Q156A1 80 aa3.48□□□□□ -1.85
BRCA1-214ENST00000477152 H1FX-AS1Q4G0G2 97 aa3.47□□□□□ -1.85
BRCA1-214ENST00000477152 NREPQ16612 68 aa3.47□□□□□ -1.85
BRCA1-214ENST00000477152 LOC110117498A0A087WWA1 95 aa3.46□□□□□ -1.86
BRCA1-214ENST00000477152 TMEM254Q8TBM7 123 aa3.46□□□□□ -1.86
BRCA1-214ENST00000477152 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-214ENST00000477152 NDUFS5O43920 106 aa3.45□□□□□ -1.86
BRCA1-214ENST00000477152 MRPL34Q9BQ48 92 aaKnown RBP3.45□□□□□ -1.86
BRCA1-214ENST00000477152 PRR15Q8IV56 129 aa3.45□□□□□ -1.86
BRCA1-214ENST00000477152 M0R143 59 aa3.43□□□□□ -1.86
BRCA1-214ENST00000477152 hDV103S1A0JD37 113 aa3.43□□□□□ -1.86
BRCA1-214ENST00000477152 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
BRCA1-214ENST00000477152 PYY3Q5JQD4 70 aa3.42□□□□□ -1.86
BRCA1-214ENST00000477152 C7orf65Q6ZTY9 151 aa3.42□□□□□ -1.86
BRCA1-214ENST00000477152 PCP4L1A6NKN8 68 aa3.42□□□□□ -1.86
BRCA1-214ENST00000477152 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-214ENST00000477152 KRTAP10-5P60370 271 aa3.4□□□□□ -1.86
BRCA1-214ENST00000477152 C14orf132Q9NPU4 83 aa3.4□□□□□ -1.86
BRCA1-214ENST00000477152 MMP24-AS1A0A0U1RRL7 71 aa3.4□□□□□ -1.87
BRCA1-214ENST00000477152 FAM236AA0A1B0GUQ0 79 aa3.38□□□□□ -1.87
BRCA1-214ENST00000477152 FAM236BA0A1B0GV22 79 aa3.38□□□□□ -1.87
BRCA1-214ENST00000477152 BPY2O14599 106 aa3.38□□□□□ -1.87
BRCA1-214ENST00000477152 TSTD3H0UI37 97 aa3.36□□□□□ -1.87
BRCA1-214ENST00000477152 K7EQZ3 153 aa3.36□□□□□ -1.87
BRCA1-214ENST00000477152 CASC2Q6XLA1 102 aa3.35□□□□□ -1.87
BRCA1-214ENST00000477152 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
BRCA1-214ENST00000477152 H3BT86 120 aa3.34□□□□□ -1.87
BRCA1-214ENST00000477152 A6NN06 94 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms