RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TRACP01848 142 aa5.8□□□□□ -1.48
HDAC6-219ENST00000476625 DEFB116Q30KQ4 102 aa5.8□□□□□ -1.48
HDAC6-219ENST00000476625 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
HDAC6-219ENST00000476625 TEN1Q86WV5 123 aa5.8□□□□□ -1.48
HDAC6-219ENST00000476625 FAM218AQ96MZ4 157 aa5.8□□□□□ -1.48
HDAC6-219ENST00000476625 A0A1W2PNM2 257 aa5.79□□□□□ -1.48
HDAC6-219ENST00000476625 TMEM256-PLSCR3K7ERE1 68 aa5.79□□□□□ -1.48
HDAC6-219ENST00000476625 BATFQ16520 125 aa5.79□□□□□ -1.48
HDAC6-219ENST00000476625 NDUFV3P56181 108 aaKnown RBP5.78□□□□□ -1.48
HDAC6-219ENST00000476625 ORMDL1Q9P0S3 153 aa5.78□□□□□ -1.48
HDAC6-219ENST00000476625 A0A1B0GV72 72 aa5.77□□□□□ -1.49
HDAC6-219ENST00000476625 LINC00313P59037 77 aa5.77□□□□□ -1.49
HDAC6-219ENST00000476625 ATXN8Q156A1 80 aa5.77□□□□□ -1.49
HDAC6-219ENST00000476625 COL5A1-AS1Q5SY13 56 aa5.77□□□□□ -1.49
HDAC6-219ENST00000476625 Q8N9P0 234 aaPredicted RBP5.77□□□□□ -1.49
HDAC6-219ENST00000476625 C9orf118A6NHY6 69 aa5.76□□□□□ -1.49
HDAC6-219ENST00000476625 IGKV4-1P06312 121 aa5.76□□□□□ -1.49
HDAC6-219ENST00000476625 FABP2P12104 132 aa5.74□□□□□ -1.49
HDAC6-219ENST00000476625 LINC00846Q9NV44 126 aa5.74□□□□□ -1.49
HDAC6-219ENST00000476625 H3BMG7 143 aa5.73□□□□□ -1.49
HDAC6-219ENST00000476625 H3BS24 57 aa5.73□□□□□ -1.49
HDAC6-219ENST00000476625 UBE2V1Q13404 147 aa5.73□□□□□ -1.49
HDAC6-219ENST00000476625 IGHV6-1A0A0B4J1U7 121 aa5.72□□□□□ -1.49
HDAC6-219ENST00000476625 C21orf62-AS1Q17RA5 79 aa5.72□□□□□ -1.49
HDAC6-219ENST00000476625 A0A1W2PPM0 123 aa5.71□□□□□ -1.5
HDAC6-219ENST00000476625 TAX1BP3O14907 124 aa5.71□□□□□ -1.5
HDAC6-219ENST00000476625 BAALC-AS2P0C853 105 aa5.7□□□□□ -1.5
HDAC6-219ENST00000476625 JMJD7-PLA2G4BH0Y9G9 81 aa5.69□□□□□ -1.5
HDAC6-219ENST00000476625 PDE6GP18545 87 aa5.67□□□□□ -1.5
HDAC6-219ENST00000476625 SPINK7P58062 85 aa5.67□□□□□ -1.5
HDAC6-219ENST00000476625 RBM3P98179 157 aaKnown RBP5.67□□□□□ -1.5
HDAC6-219ENST00000476625 ANKRD29Q8N6D5 301 aa5.67□□□□□ -1.5
HDAC6-219ENST00000476625 NAA38Q9BRA0 125 aaKnown RBP5.67□□□□□ -1.5
HDAC6-219ENST00000476625 LINC00472Q9H8W2 130 aa5.67□□□□□ -1.5
HDAC6-219ENST00000476625 DSCR8Q96T75 97 aa5.66□□□□□ -1.5
HDAC6-219ENST00000476625 A0A1B0GW54 56 aa5.65□□□□□ -1.5
HDAC6-219ENST00000476625 H3BT86 120 aa5.65□□□□□ -1.5
HDAC6-219ENST00000476625 GTF2H5Q6ZYL4 71 aa5.65□□□□□ -1.5
HDAC6-219ENST00000476625 ZCCHC13Q8WW36 166 aaKnown RBP5.65□□□□□ -1.5
HDAC6-219ENST00000476625 SPCS1Q9Y6A9 102 aa5.65□□□□□ -1.5
HDAC6-219ENST00000476625 NEBP20929 6669 aa5.64□□□□□ -1.51
HDAC6-219ENST00000476625 A8MWP4 228 aa5.64□□□□□ -1.51
HDAC6-219ENST00000476625 C9JAW5 83 aa5.64□□□□□ -1.51
HDAC6-219ENST00000476625 WFDC13Q8IUB5 93 aa5.64□□□□□ -1.51
HDAC6-219ENST00000476625 TRBV7-4A0A0J9YYF1 115 aa5.63□□□□□ -1.51
HDAC6-219ENST00000476625 MTURNQ8N3F0 131 aa5.63□□□□□ -1.51
HDAC6-219ENST00000476625 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
HDAC6-219ENST00000476625 A0A1B0GV90 55 aa5.61□□□□□ -1.51
HDAC6-219ENST00000476625 A0A1B0GVX0 72 aa5.61□□□□□ -1.51
HDAC6-219ENST00000476625 LOC110117498A0A087WWA1 95 aa5.59□□□□□ -1.51
HDAC6-219ENST00000476625 K7EP34 96 aa5.59□□□□□ -1.51
HDAC6-219ENST00000476625 CCKP06307 115 aa5.59□□□□□ -1.51
HDAC6-219ENST00000476625 F8W1H4 67 aa5.58□□□□□ -1.52
HDAC6-219ENST00000476625 KRTAP20-1Q3LI63 56 aa5.57□□□□□ -1.52
HDAC6-219ENST00000476625 VPS25Q9BRG1 176 aa5.57□□□□□ -1.52
HDAC6-219ENST00000476625 C8orf87E5RJ46 101 aa5.56□□□□□ -1.52
HDAC6-219ENST00000476625 Q6ZQT0 140 aa5.54□□□□□ -1.52
HDAC6-219ENST00000476625 C14orf132Q9NPU4 83 aa5.52□□□□□ -1.53
HDAC6-219ENST00000476625 J3KT08 172 aa5.51□□□□□ -1.53
HDAC6-219ENST00000476625 PCP4P48539 62 aa5.51□□□□□ -1.53
HDAC6-219ENST00000476625 PRO0461Q9UI25 63 aa5.5□□□□□ -1.53
HDAC6-219ENST00000476625 A6NN06 94 aa5.49□□□□□ -1.53
HDAC6-219ENST00000476625 MT1BP07438 61 aa5.49□□□□□ -1.53
HDAC6-219ENST00000476625 C8orf17Q9NRJ1 99 aa5.48□□□□□ -1.53
HDAC6-219ENST00000476625 NREPQ16612 68 aa5.47□□□□□ -1.53
HDAC6-219ENST00000476625 H1FX-AS1Q4G0G2 97 aa5.47□□□□□ -1.53
HDAC6-219ENST00000476625 NDUFB1O75438 58 aa5.46□□□□□ -1.54
HDAC6-219ENST00000476625 IGKV3D-7A0A0C4DH55 119 aa5.44□□□□□ -1.54
HDAC6-219ENST00000476625 ETDBQ3ZM63 59 aa5.43□□□□□ -1.54
HDAC6-219ENST00000476625 UBL5Q9BZL1 73 aa5.43□□□□□ -1.54
HDAC6-219ENST00000476625 ACYP1P07311 99 aa5.42□□□□□ -1.54
HDAC6-219ENST00000476625 Q6ZVQ6 151 aa5.41□□□□□ -1.54
HDAC6-219ENST00000476625 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
HDAC6-219ENST00000476625 KRTAP5-9P26371 169 aa5.4□□□□□ -1.54
HDAC6-219ENST00000476625 MMP24-AS1A0A0U1RRL7 71 aa5.38□□□□□ -1.55
HDAC6-219ENST00000476625 BPY2O14599 106 aa5.38□□□□□ -1.55
HDAC6-219ENST00000476625 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
HDAC6-219ENST00000476625 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
HDAC6-219ENST00000476625 IGKV2D-30A0A075B6S6 120 aa5.37□□□□□ -1.55
HDAC6-219ENST00000476625 FAM240AA0A1B0GVK7 77 aa5.37□□□□□ -1.55
HDAC6-219ENST00000476625 J3QR89 54 aa5.37□□□□□ -1.55
HDAC6-219ENST00000476625 IGKV2-30P06310 120 aa5.37□□□□□ -1.55
HDAC6-219ENST00000476625 C5orf47Q569G3 176 aa5.37□□□□□ -1.55
HDAC6-219ENST00000476625 Q5VV11 94 aa5.37□□□□□ -1.55
HDAC6-219ENST00000476625 KMT2DO14686 5537 aa5.36□□□□□ -1.55
HDAC6-219ENST00000476625 FAM236AA0A1B0GUQ0 79 aa5.35□□□□□ -1.55
HDAC6-219ENST00000476625 FAM236BA0A1B0GV22 79 aa5.35□□□□□ -1.55
HDAC6-219ENST00000476625 KRTAP19-8Q3LI54 63 aa5.35□□□□□ -1.55
HDAC6-219ENST00000476625 Q5W150 140 aa5.35□□□□□ -1.55
HDAC6-219ENST00000476625 PRR15Q8IV56 129 aa5.35□□□□□ -1.55
HDAC6-219ENST00000476625 MRPL34Q9BQ48 92 aaKnown RBP5.34□□□□□ -1.55
HDAC6-219ENST00000476625 NDUFS5O43920 106 aa5.33□□□□□ -1.56
HDAC6-219ENST00000476625 C4orf26Q17RF5 130 aa5.33□□□□□ -1.56
HDAC6-219ENST00000476625 CXCL6P80162 114 aa5.32□□□□□ -1.56
HDAC6-219ENST00000476625 TMEM254Q8TBM7 123 aa5.32□□□□□ -1.56
HDAC6-219ENST00000476625 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
HDAC6-219ENST00000476625 ATP5EP2Q5VTU8 51 aa5.3□□□□□ -1.56
HDAC6-219ENST00000476625 K7EQZ3 153 aa5.29□□□□□ -1.56
HDAC6-219ENST00000476625 KRTAP2-3P0C7H8 128 aa5.29□□□□□ -1.56
HDAC6-219ENST00000476625 KRTAP2-4Q9BYR9 128 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms