RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 DEFB116Q30KQ4 102 aa7.28□□□□□ -1.24
SLC6A8-209ENST00000476466 COX6B2Q6YFQ2 88 aa7.28□□□□□ -1.24
SLC6A8-209ENST00000476466 CCKP06307 115 aa7.27□□□□□ -1.25
SLC6A8-209ENST00000476466 ATXN8Q156A1 80 aa7.27□□□□□ -1.25
SLC6A8-209ENST00000476466 LINC00472Q9H8W2 130 aa7.27□□□□□ -1.25
SLC6A8-209ENST00000476466 FSIP2Q5CZC0 6907 aa7.27□□□□□ -1.25
SLC6A8-209ENST00000476466 IGKV4-1P06312 121 aa7.26□□□□□ -1.25
SLC6A8-209ENST00000476466 NAA38Q9BRA0 125 aaKnown RBP7.26□□□□□ -1.25
SLC6A8-209ENST00000476466 SCGB1A1P11684 91 aa7.24□□□□□ -1.25
SLC6A8-209ENST00000476466 CRCT1Q9UGL9 99 aa7.24□□□□□ -1.25
SLC6A8-209ENST00000476466 M0R2T5 61 aa7.22□□□□□ -1.25
SLC6A8-209ENST00000476466 PRO0461Q9UI25 63 aa7.22□□□□□ -1.25
SLC6A8-209ENST00000476466 LINC00313P59037 77 aa7.2□□□□□ -1.26
SLC6A8-209ENST00000476466 BAALC-AS2P0C853 105 aa7.19□□□□□ -1.26
SLC6A8-209ENST00000476466 RBM3P98179 157 aaKnown RBP7.19□□□□□ -1.26
SLC6A8-209ENST00000476466 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
SLC6A8-209ENST00000476466 IGHV6-1A0A0B4J1U7 121 aa7.17□□□□□ -1.26
SLC6A8-209ENST00000476466 DSCR8Q96T75 97 aa7.16□□□□□ -1.26
SLC6A8-209ENST00000476466 A0A1B0GVX0 72 aa7.13□□□□□ -1.27
SLC6A8-209ENST00000476466 H3BT86 120 aa7.13□□□□□ -1.27
SLC6A8-209ENST00000476466 ETDBQ3ZM63 59 aa7.13□□□□□ -1.27
SLC6A8-209ENST00000476466 Q6ZQT0 140 aa7.13□□□□□ -1.27
SLC6A8-209ENST00000476466 C9JAW5 83 aa7.12□□□□□ -1.27
SLC6A8-209ENST00000476466 HRES1P13985 223 aa7.12□□□□□ -1.27
SLC6A8-209ENST00000476466 MPLKIPQ8TAP9 179 aa7.11□□□□□ -1.27
SLC6A8-209ENST00000476466 JMJD7-PLA2G4BH0Y9G9 81 aa7.1□□□□□ -1.27
SLC6A8-209ENST00000476466 SMCPP49901 116 aaPredicted RBP7.1□□□□□ -1.27
SLC6A8-209ENST00000476466 KRTAP9-8Q9BYQ0 159 aa7.09□□□□□ -1.27
SLC6A8-209ENST00000476466 LOC110117498A0A087WWA1 95 aa7.08□□□□□ -1.28
SLC6A8-209ENST00000476466 C8orf87E5RJ46 101 aa7.08□□□□□ -1.28
SLC6A8-209ENST00000476466 C14orf132Q9NPU4 83 aa7.08□□□□□ -1.28
SLC6A8-209ENST00000476466 PDE6GP18545 87 aa7.07□□□□□ -1.28
SLC6A8-209ENST00000476466 MTURNQ8N3F0 131 aa7.05□□□□□ -1.28
SLC6A8-209ENST00000476466 IGKV3D-7A0A0C4DH55 119 aa7.03□□□□□ -1.28
SLC6A8-209ENST00000476466 J3KT08 172 aa7.03□□□□□ -1.28
SLC6A8-209ENST00000476466 Q8N9P0 234 aaPredicted RBP7.02□□□□□ -1.29
SLC6A8-209ENST00000476466 ZCCHC13Q8WW36 166 aaKnown RBP7.02□□□□□ -1.29
SLC6A8-209ENST00000476466 C8orf17Q9NRJ1 99 aa7.02□□□□□ -1.29
SLC6A8-209ENST00000476466 FAM240AA0A1B0GVK7 77 aa7.01□□□□□ -1.29
SLC6A8-209ENST00000476466 A8MWP4 228 aa7.01□□□□□ -1.29
SLC6A8-209ENST00000476466 USH2AO75445 5202 aa7□□□□□ -1.29
SLC6A8-209ENST00000476466 FAM236DA0A1B0GTK5 79 aa7□□□□□ -1.29
SLC6A8-209ENST00000476466 FAM236CP0DP71 79 aa7□□□□□ -1.29
SLC6A8-209ENST00000476466 A0A1B0GW54 56 aa6.99□□□□□ -1.29
SLC6A8-209ENST00000476466 MT2AP02795 61 aa6.99□□□□□ -1.29
SLC6A8-209ENST00000476466 SSPOA2VEC9 5147 aa6.98□□□□□ -1.29
SLC6A8-209ENST00000476466 NDUFB1O75438 58 aa6.96□□□□□ -1.3
SLC6A8-209ENST00000476466 SPINK7P58062 85 aa6.96□□□□□ -1.3
SLC6A8-209ENST00000476466 MT1FP04733 61 aa6.95□□□□□ -1.3
SLC6A8-209ENST00000476466 PRR15Q8IV56 129 aa6.95□□□□□ -1.3
SLC6A8-209ENST00000476466 RBM12B-AS1Q9P1G2 102 aa6.95□□□□□ -1.3
SLC6A8-209ENST00000476466 MMP24-AS1A0A0U1RRL7 71 aa6.94□□□□□ -1.3
SLC6A8-209ENST00000476466 ACYP1P07311 99 aa6.94□□□□□ -1.3
SLC6A8-209ENST00000476466 Q6ZVQ6 151 aa6.94□□□□□ -1.3
SLC6A8-209ENST00000476466 MT-ATP8P03928 68 aa6.93□□□□□ -1.3
SLC6A8-209ENST00000476466 K7EQZ3 153 aa6.92□□□□□ -1.3
SLC6A8-209ENST00000476466 NREPQ16612 68 aa6.92□□□□□ -1.3
SLC6A8-209ENST00000476466 WFDC13Q8IUB5 93 aa6.89□□□□□ -1.31
SLC6A8-209ENST00000476466 TMEM254Q8TBM7 123 aa6.87□□□□□ -1.31
SLC6A8-209ENST00000476466 MRPL34Q9BQ48 92 aaKnown RBP6.87□□□□□ -1.31
SLC6A8-209ENST00000476466 KRTAP9-3Q9BYQ3 159 aa6.87□□□□□ -1.31
SLC6A8-209ENST00000476466 IMUPQ9GZP8 106 aa6.87□□□□□ -1.31
SLC6A8-209ENST00000476466 LCE2BO14633 110 aa6.86□□□□□ -1.31
SLC6A8-209ENST00000476466 Q8N9L7 120 aa6.85□□□□□ -1.31
SLC6A8-209ENST00000476466 UBL5Q9BZL1 73 aa6.85□□□□□ -1.31
SLC6A8-209ENST00000476466 hDV103S1A0JD37 113 aa6.84□□□□□ -1.31
SLC6A8-209ENST00000476466 ANAPC13Q9BS18 74 aa6.84□□□□□ -1.31
SLC6A8-209ENST00000476466 Q5W150 140 aa6.82□□□□□ -1.32
SLC6A8-209ENST00000476466 LINC00643Q86TS7 51 aa6.82□□□□□ -1.32
SLC6A8-209ENST00000476466 BPY2O14599 106 aa6.81□□□□□ -1.32
SLC6A8-209ENST00000476466 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
SLC6A8-209ENST00000476466 NDUFS5O43920 106 aa6.78□□□□□ -1.32
SLC6A8-209ENST00000476466 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
SLC6A8-209ENST00000476466 KRTAP9-7A8MTY7 169 aa6.77□□□□□ -1.33
SLC6A8-209ENST00000476466 LINC00846Q9NV44 126 aa6.76□□□□□ -1.33
SLC6A8-209ENST00000476466 ATP5EP2Q5VTU8 51 aa6.75□□□□□ -1.33
SLC6A8-209ENST00000476466 IGKV2D-30A0A075B6S6 120 aa6.74□□□□□ -1.33
SLC6A8-209ENST00000476466 IGKV2-30P06310 120 aa6.74□□□□□ -1.33
SLC6A8-209ENST00000476466 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.73□□□□□ -1.33
SLC6A8-209ENST00000476466 HCG22E2RYF7 251 aa6.72□□□□□ -1.33
SLC6A8-209ENST00000476466 CASC2Q6XLA1 102 aa6.72□□□□□ -1.33
SLC6A8-209ENST00000476466 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
SLC6A8-209ENST00000476466 HIST1H4AP62805 103 aaKnown RBP6.69□□□□□ -1.34
SLC6A8-209ENST00000476466 CXCL6P80162 114 aa6.69□□□□□ -1.34
SLC6A8-209ENST00000476466 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
SLC6A8-209ENST00000476466 C7orf65Q6ZTY9 151 aa6.69□□□□□ -1.34
SLC6A8-209ENST00000476466 FAM236AA0A1B0GUQ0 79 aa6.67□□□□□ -1.34
SLC6A8-209ENST00000476466 FAM236BA0A1B0GV22 79 aa6.67□□□□□ -1.34
SLC6A8-209ENST00000476466 ATOX1O00244 68 aa6.66□□□□□ -1.34
SLC6A8-209ENST00000476466 CCDC179H3BU77 68 aa6.65□□□□□ -1.34
SLC6A8-209ENST00000476466 UQCRQO14949 82 aa6.65□□□□□ -1.34
SLC6A8-209ENST00000476466 C4orf26Q17RF5 130 aa6.64□□□□□ -1.35
SLC6A8-209ENST00000476466 COX7CP15954 63 aa6.61□□□□□ -1.35
SLC6A8-209ENST00000476466 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
SLC6A8-209ENST00000476466 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
SLC6A8-209ENST00000476466 SERP2Q8N6R1 65 aa6.56□□□□□ -1.36
SLC6A8-209ENST00000476466 SMIM20Q8N5G0 67 aa6.53□□□□□ -1.36
SLC6A8-209ENST00000476466 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
SLC6A8-209ENST00000476466 TMEM258P61165 79 aa6.51□□□□□ -1.37
SLC6A8-209ENST00000476466 C5orf47Q569G3 176 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms