RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 SSBP3-AS1Q7Z2R9 100 aa11.24□□□□□ -0.61
SYF2-204ENST00000476231 TP53AIP1Q9HCN2 124 aa11.23□□□□□ -0.61
SYF2-204ENST00000476231 VPS13BQ7Z7G8 4022 aa11.23□□□□□ -0.61
SYF2-204ENST00000476231 CD164Q04900 197 aa11.22□□□□□ -0.61
SYF2-204ENST00000476231 LINC00208Q96KT6 92 aa11.22□□□□□ -0.61
SYF2-204ENST00000476231 HRCT1Q6UXD1 115 aa11.21□□□□□ -0.61
SYF2-204ENST00000476231 C8orf17Q9NRJ1 99 aa11.21□□□□□ -0.61
SYF2-204ENST00000476231 APOBP04114 4563 aaKnown RBP11.2□□□□□ -0.62
SYF2-204ENST00000476231 A0A1B0GVX0 72 aa11.2□□□□□ -0.62
SYF2-204ENST00000476231 SPANXA2-OT1Q8N9U9 137 aa11.2□□□□□ -0.62
SYF2-204ENST00000476231 KRTAP1-4P0C5Y4 121 aa11.19□□□□□ -0.62
SYF2-204ENST00000476231 SPINK6Q6UWN8 80 aa11.19□□□□□ -0.62
SYF2-204ENST00000476231 CDK2AP2O75956 126 aa11.18□□□□□ -0.62
SYF2-204ENST00000476231 A0A087X002 238 aa11.17□□□□□ -0.62
SYF2-204ENST00000476231 SMR3BP02814 79 aaPredicted RBP11.17□□□□□ -0.62
SYF2-204ENST00000476231 KRTAP13-2Q52LG2 175 aa11.16□□□□□ -0.62
SYF2-204ENST00000476231 C1orf64Q8NEQ6 169 aa11.16□□□□□ -0.62
SYF2-204ENST00000476231 RYR3Q15413 4870 aa11.13□□□□□ -0.63
SYF2-204ENST00000476231 PLA2G1BP04054 148 aaKnown RBP11.11□□□□□ -0.63
SYF2-204ENST00000476231 IGHV6-1A0A0B4J1U7 121 aa11.1□□□□□ -0.63
SYF2-204ENST00000476231 MRPL34Q9BQ48 92 aaKnown RBP11.1□□□□□ -0.63
SYF2-204ENST00000476231 KRTAP10-4P60372 401 aaPredicted RBP11.08□□□□□ -0.64
SYF2-204ENST00000476231 Q1T7F1 81 aa11.03□□□□□ -0.64
SYF2-204ENST00000476231 TYMSOSQ8TAI1 123 aa11.03□□□□□ -0.64
SYF2-204ENST00000476231 FAT1Q14517 4588 aa11.02□□□□□ -0.64
SYF2-204ENST00000476231 IGLV7-46A0A075B6I9 117 aa11.01□□□□□ -0.65
SYF2-204ENST00000476231 C8orf87E5RJ46 101 aa11.01□□□□□ -0.65
SYF2-204ENST00000476231 PRR4Q16378 134 aa11.01□□□□□ -0.65
SYF2-204ENST00000476231 MPLKIPQ8TAP9 179 aa10.99□□□□□ -0.65
SYF2-204ENST00000476231 NDUFS5O43920 106 aa10.99□□□□□ -0.65
SYF2-204ENST00000476231 NOTCH2NLQ7Z3S9 236 aa10.98□□□□□ -0.65
SYF2-204ENST00000476231 FAM229AH3BQW9 127 aa10.97□□□□□ -0.65
SYF2-204ENST00000476231 C4orf48Q5BLP8 95 aa10.97□□□□□ -0.65
SYF2-204ENST00000476231 PRR26Q8N8Z3 221 aa10.96□□□□□ -0.65
SYF2-204ENST00000476231 LIMD2Q9BT23 127 aa10.96□□□□□ -0.65
SYF2-204ENST00000476231 V9GYY9 64 aa10.94□□□□□ -0.66
SYF2-204ENST00000476231 SPINK1P00995 79 aa10.93□□□□□ -0.66
SYF2-204ENST00000476231 LOC101927531A0A1B0GV80 90 aa10.91□□□□□ -0.66
SYF2-204ENST00000476231 PRO0628Q9UI54 55 aa10.9□□□□□ -0.66
SYF2-204ENST00000476231 SPAG11AQ6PDA7 123 aa10.9□□□□□ -0.66
SYF2-204ENST00000476231 LINC00304Q8N9R0 145 aa10.9□□□□□ -0.66
SYF2-204ENST00000476231 PKHD1L1Q86WI1 4243 aa10.89□□□□□ -0.67
SYF2-204ENST00000476231 KRTAP13-3Q3SY46 172 aa10.89□□□□□ -0.67
SYF2-204ENST00000476231 C1orf195Q5TG92 126 aa10.89□□□□□ -0.67
SYF2-204ENST00000476231 RPS29P62273 56 aaKnown RBP10.88□□□□□ -0.67
SYF2-204ENST00000476231 HSPG2P98160 4391 aa10.87□□□□□ -0.67
SYF2-204ENST00000476231 RYR1P21817 5038 aa10.86□□□□□ -0.67
SYF2-204ENST00000476231 PCOTHQ58A44 107 aa10.86□□□□□ -0.67
SYF2-204ENST00000476231 Q5VSD8 79 aa10.86□□□□□ -0.67
SYF2-204ENST00000476231 LINC00313P59037 77 aa10.86□□□□□ -0.67
SYF2-204ENST00000476231 Q8N9P0 234 aaPredicted RBP10.83□□□□□ -0.68
SYF2-204ENST00000476231 COA5Q86WW8 74 aa10.83□□□□□ -0.68
SYF2-204ENST00000476231 Q5W150 140 aa10.82□□□□□ -0.68
SYF2-204ENST00000476231 BRK1Q8WUW1 75 aa10.76□□□□□ -0.69
SYF2-204ENST00000476231 KRTAP16-1A8MUX0 517 aa10.73□□□□□ -0.69
SYF2-204ENST00000476231 EPPK1P58107 5090 aaKnown RBP10.72□□□□□ -0.69
SYF2-204ENST00000476231 PSPHP1O15172 72 aa10.71□□□□□ -0.69
SYF2-204ENST00000476231 Q8N1X5 172 aa10.7□□□□□ -0.7
SYF2-204ENST00000476231 KIAA1109Q2LD37 5005 aa10.7□□□□□ -0.7
SYF2-204ENST00000476231 HRES1P13985 223 aa10.69□□□□□ -0.7
SYF2-204ENST00000476231 KRTAP17-1Q9BYP8 105 aa10.69□□□□□ -0.7
SYF2-204ENST00000476231 A8MUN3 132 aa10.68□□□□□ -0.7
SYF2-204ENST00000476231 KRTAP10-8P60410 259 aa10.67□□□□□ -0.7
SYF2-204ENST00000476231 Q5VV11 94 aa10.66□□□□□ -0.7
SYF2-204ENST00000476231 IGKV2-30P06310 120 aa10.66□□□□□ -0.7
SYF2-204ENST00000476231 LINC01558Q9Y6Z2 57 aa10.63□□□□□ -0.71
SYF2-204ENST00000476231 ACYP2P14621 99 aa10.63□□□□□ -0.71
SYF2-204ENST00000476231 DMAC1Q96GE9 116 aa10.6□□□□□ -0.71
SYF2-204ENST00000476231 Q75L30 129 aa10.59□□□□□ -0.71
SYF2-204ENST00000476231 PRR15LQ9BU68 103 aa10.59□□□□□ -0.71
SYF2-204ENST00000476231 LRP1Q07954 4544 aaKnown RBP10.58□□□□□ -0.71
SYF2-204ENST00000476231 TNXBP22105 4242 aa10.58□□□□□ -0.72
SYF2-204ENST00000476231 FAT3Q8TDW7 4589 aa10.58□□□□□ -0.72
SYF2-204ENST00000476231 CHKB-CPT1BH3BT56 60 aa10.54□□□□□ -0.72
SYF2-204ENST00000476231 RETNLBQ9BQ08 111 aa10.52□□□□□ -0.73
SYF2-204ENST00000476231 FLG2Q5D862 2391 aaPredicted RBP10.49□□□□□ -0.73
SYF2-204ENST00000476231 MT1HL1P0DM35 61 aa10.46□□□□□ -0.73
SYF2-204ENST00000476231 C9orf92A6NGG3 77 aa10.43□□□□□ -0.74
SYF2-204ENST00000476231 IGKV2D-30A0A075B6S6 120 aa10.42□□□□□ -0.74
SYF2-204ENST00000476231 A6NED7 52 aa10.4□□□□□ -0.74
SYF2-204ENST00000476231 MYCBP2O75592 4640 aa10.38□□□□□ -0.75
SYF2-204ENST00000476231 C7orf65Q6ZTY9 151 aa10.38□□□□□ -0.75
SYF2-204ENST00000476231 C20orf166-AS1Q96NR2 134 aa10.38□□□□□ -0.75
SYF2-204ENST00000476231 A8MUU9 505 aa10.37□□□□□ -0.75
SYF2-204ENST00000476231 KRTAP4-5Q9BYR2 181 aa10.37□□□□□ -0.75
SYF2-204ENST00000476231 CDC42SE1Q9NRR8 79 aa10.35□□□□□ -0.75
SYF2-204ENST00000476231 LCA10Q71F78 164 aa10.34□□□□□ -0.75
SYF2-204ENST00000476231 ATP11AUNQ6ZP68 121 aa10.32□□□□□ -0.76
SYF2-204ENST00000476231 BIRC6Q9NR09 4857 aa10.29□□□□□ -0.76
SYF2-204ENST00000476231 A8MU10 97 aa10.28□□□□□ -0.76
SYF2-204ENST00000476231 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.77
SYF2-204ENST00000476231 SPINK7P58062 85 aa10.25□□□□□ -0.77
SYF2-204ENST00000476231 A0A1B0GU69 56 aa10.22□□□□□ -0.77
SYF2-204ENST00000476231 HERC2O95714 4834 aa10.22□□□□□ -0.77
SYF2-204ENST00000476231 PMAIP1Q13794 54 aa10.2□□□□□ -0.78
SYF2-204ENST00000476231 ABCA13Q86UQ4 5058 aa10.18□□□□□ -0.78
SYF2-204ENST00000476231 XP32Q5T750 250 aa10.15□□□□□ -0.78
SYF2-204ENST00000476231 SPTSSBQ8NFR3 76 aa10.15□□□□□ -0.78
SYF2-204ENST00000476231 RPL37P61927 97 aaKnown RBP10.13□□□□□ -0.79
SYF2-204ENST00000476231 TPRXLQ17RH7 258 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms