RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 STAB2Q8WWQ8 2551 aa3.82□□□□□ -1.8
HNRNPU-208ENST00000475997 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
HNRNPU-208ENST00000475997 KRTAP26-1Q6PEX3 210 aa3.82□□□□□ -1.8
HNRNPU-208ENST00000475997 TENM3Q9P273 2699 aa3.82□□□□□ -1.8
HNRNPU-208ENST00000475997 MMP24-AS1A0A0U1RRL7 71 aa3.82□□□□□ -1.8
HNRNPU-208ENST00000475997 PDZD2O15018 2839 aa3.82□□□□□ -1.8
HNRNPU-208ENST00000475997 OTOGQ6ZRI0 2925 aa3.81□□□□□ -1.8
HNRNPU-208ENST00000475997 PSORS1C2Q9UIG4 136 aa3.81□□□□□ -1.8
HNRNPU-208ENST00000475997 KMT2BQ9UMN6 2715 aaPredicted RBP3.81□□□□□ -1.8
HNRNPU-208ENST00000475997 K7EIL1 84 aa3.8□□□□□ -1.8
HNRNPU-208ENST00000475997 OXTP01178 125 aa3.8□□□□□ -1.8
HNRNPU-208ENST00000475997 NBPF19A0A087WUL8 3843 aa3.79□□□□□ -1.8
HNRNPU-208ENST00000475997 PKD1L1Q8TDX9 2849 aa3.79□□□□□ -1.8
HNRNPU-208ENST00000475997 A0A087WTM6 91 aa3.79□□□□□ -1.8
HNRNPU-208ENST00000475997 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.79□□□□□ -1.8
HNRNPU-208ENST00000475997 FBN1P35555 2871 aaKnown RBP3.79□□□□□ -1.8
HNRNPU-208ENST00000475997 J3QL48 77 aa3.79□□□□□ -1.8
HNRNPU-208ENST00000475997 ANAPC11Q9NYG5 84 aa3.78□□□□□ -1.8
HNRNPU-208ENST00000475997 ZCCHC13Q8WW36 166 aaKnown RBP3.78□□□□□ -1.81
HNRNPU-208ENST00000475997 WWC2-AS2Q96NR7 200 aa3.76□□□□□ -1.81
HNRNPU-208ENST00000475997 SPRR1AP35321 89 aa3.76□□□□□ -1.81
HNRNPU-208ENST00000475997 Q6ZSA8 131 aa3.76□□□□□ -1.81
HNRNPU-208ENST00000475997 Q5W150 140 aa3.75□□□□□ -1.81
HNRNPU-208ENST00000475997 LINC00472Q9H8W2 130 aa3.74□□□□□ -1.81
HNRNPU-208ENST00000475997 R4GN34 69 aa3.74□□□□□ -1.81
HNRNPU-208ENST00000475997 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
HNRNPU-208ENST00000475997 SPRR1BP22528 89 aa3.73□□□□□ -1.81
HNRNPU-208ENST00000475997 S4R3F8 94 aa3.73□□□□□ -1.81
HNRNPU-208ENST00000475997 H1FX-AS1Q4G0G2 97 aa3.73□□□□□ -1.81
HNRNPU-208ENST00000475997 A6NN06 94 aa3.73□□□□□ -1.81
HNRNPU-208ENST00000475997 KRTAP4-16G5E9R7 235 aaPredicted RBP3.72□□□□□ -1.81
HNRNPU-208ENST00000475997 KRTAP1-5Q9BYS1 174 aa3.72□□□□□ -1.81
HNRNPU-208ENST00000475997 A0A087X002 238 aa3.72□□□□□ -1.81
HNRNPU-208ENST00000475997 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
HNRNPU-208ENST00000475997 ZNF469Q96JG9 3925 aaPredicted RBP3.7□□□□□ -1.82
HNRNPU-208ENST00000475997 KRTAP7-1Q8IUC3 87 aa3.7□□□□□ -1.82
HNRNPU-208ENST00000475997 Q6ZR54 194 aa3.69□□□□□ -1.82
HNRNPU-208ENST00000475997 TRRAPQ9Y4A5 3859 aa3.68□□□□□ -1.82
HNRNPU-208ENST00000475997 SEC61BP60468 96 aaKnown RBP3.68□□□□□ -1.82
HNRNPU-208ENST00000475997 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
HNRNPU-208ENST00000475997 TENM2Q9NT68 2774 aa3.68□□□□□ -1.82
HNRNPU-208ENST00000475997 DMBT1Q9UGM3 2413 aaPredicted RBP3.67□□□□□ -1.82
HNRNPU-208ENST00000475997 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
HNRNPU-208ENST00000475997 SMR3BP02814 79 aaPredicted RBP3.65□□□□□ -1.82
HNRNPU-208ENST00000475997 KRTAP29-1A8MX34 341 aaPredicted RBP3.64□□□□□ -1.83
HNRNPU-208ENST00000475997 KRTAP11-1Q8IUC1 163 aa3.64□□□□□ -1.83
HNRNPU-208ENST00000475997 PANO1I0J062 215 aa3.64□□□□□ -1.83
HNRNPU-208ENST00000475997 M0QZ58 72 aa3.64□□□□□ -1.83
HNRNPU-208ENST00000475997 ANK3Q12955 4377 aaKnown RBP3.63□□□□□ -1.83
HNRNPU-208ENST00000475997 PLAC8Q9NZF1 115 aa3.63□□□□□ -1.83
HNRNPU-208ENST00000475997 M0R2T5 61 aa3.61□□□□□ -1.83
HNRNPU-208ENST00000475997 SRRM2Q9UQ35 2752 aaKnown RBP3.6□□□□□ -1.83
HNRNPU-208ENST00000475997 LCE6AA0A183 80 aa3.59□□□□□ -1.83
HNRNPU-208ENST00000475997 AKAP9Q99996 3911 aa3.59□□□□□ -1.84
HNRNPU-208ENST00000475997 TGP01266 2768 aa3.58□□□□□ -1.84
HNRNPU-208ENST00000475997 C20orf166-AS1Q96NR2 134 aa3.58□□□□□ -1.84
HNRNPU-208ENST00000475997 ADM2Q7Z4H4 148 aa3.57□□□□□ -1.84
HNRNPU-208ENST00000475997 Q6ZRN7 208 aaPredicted RBP3.54□□□□□ -1.84
HNRNPU-208ENST00000475997 NOTCH2NLQ7Z3S9 236 aa3.54□□□□□ -1.84
HNRNPU-208ENST00000475997 A8MUU9 505 aa3.52□□□□□ -1.85
HNRNPU-208ENST00000475997 KRTAP13-1Q8IUC0 172 aa3.52□□□□□ -1.85
HNRNPU-208ENST00000475997 A8MU10 97 aa3.51□□□□□ -1.85
HNRNPU-208ENST00000475997 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
HNRNPU-208ENST00000475997 COL7A1Q02388 2944 aa3.49□□□□□ -1.85
HNRNPU-208ENST00000475997 KRTAP10-2P60368 255 aa3.48□□□□□ -1.85
HNRNPU-208ENST00000475997 TNP1P09430 55 aa3.47□□□□□ -1.85
HNRNPU-208ENST00000475997 FBN3Q75N90 2809 aa3.46□□□□□ -1.86
HNRNPU-208ENST00000475997 RPS29P62273 56 aaKnown RBP3.45□□□□□ -1.86
HNRNPU-208ENST00000475997 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
HNRNPU-208ENST00000475997 KRTAP10-1P60331 282 aa3.45□□□□□ -1.86
HNRNPU-208ENST00000475997 CSMD3Q7Z407 3707 aa3.44□□□□□ -1.86
HNRNPU-208ENST00000475997 MEGF8Q7Z7M0 2845 aa3.41□□□□□ -1.86
HNRNPU-208ENST00000475997 P0C880 135 aa3.41□□□□□ -1.86
HNRNPU-208ENST00000475997 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.86
HNRNPU-208ENST00000475997 Q5VSD8 79 aa3.35□□□□□ -1.87
HNRNPU-208ENST00000475997 HUWE1Q7Z6Z7 4374 aaKnown RBP3.34□□□□□ -1.88
HNRNPU-208ENST00000475997 KRTAP17-1Q9BYP8 105 aa3.32□□□□□ -1.88
HNRNPU-208ENST00000475997 KRTAP1-4P0C5Y4 121 aa3.31□□□□□ -1.88
HNRNPU-208ENST00000475997 KRTAP13-3Q3SY46 172 aa3.3□□□□□ -1.88
HNRNPU-208ENST00000475997 DNAH10Q8IVF4 4471 aa3.29□□□□□ -1.88
HNRNPU-208ENST00000475997 H0YAA0 97 aa3.29□□□□□ -1.88
HNRNPU-208ENST00000475997 ANK2Q01484 3957 aa3.27□□□□□ -1.89
HNRNPU-208ENST00000475997 KRTAP10-8P60410 259 aa3.26□□□□□ -1.89
HNRNPU-208ENST00000475997 DNAH9Q9NYC9 4486 aa3.23□□□□□ -1.89
HNRNPU-208ENST00000475997 PLECQ15149 4684 aaKnown RBP3.23□□□□□ -1.89
HNRNPU-208ENST00000475997 DNAH1Q9P2D7 4330 aa3.18□□□□□ -1.9
HNRNPU-208ENST00000475997 LYSTQ99698 3801 aa3.17□□□□□ -1.9
HNRNPU-208ENST00000475997 DNAH11Q96DT5 4516 aa3.15□□□□□ -1.91
HNRNPU-208ENST00000475997 STARD9Q9P2P6 4700 aa3.13□□□□□ -1.91
HNRNPU-208ENST00000475997 PRO2289Q9P1D8 64 aa3.13□□□□□ -1.91
HNRNPU-208ENST00000475997 CMYA5Q8N3K9 4069 aa3.13□□□□□ -1.91
HNRNPU-208ENST00000475997 VPS13DQ5THJ4 4388 aa3.12□□□□□ -1.91
HNRNPU-208ENST00000475997 DNAH3Q8TD57 4116 aa3.12□□□□□ -1.91
HNRNPU-208ENST00000475997 DNAH8Q96JB1 4490 aa3.1□□□□□ -1.91
HNRNPU-208ENST00000475997 INE1O15225 51 aa3.1□□□□□ -1.91
HNRNPU-208ENST00000475997 KRTAP3-1Q9BYR8 98 aa3.1□□□□□ -1.91
HNRNPU-208ENST00000475997 PRKDCP78527 4128 aaKnown RBP3.1□□□□□ -1.91
HNRNPU-208ENST00000475997 DNAH7Q8WXX0 4024 aa3.1□□□□□ -1.91
HNRNPU-208ENST00000475997 KMT2AQ03164 3969 aa3.1□□□□□ -1.91
HNRNPU-208ENST00000475997 XP32Q5T750 250 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms