RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
ECHDC1-215ENST00000475319 PCOTHQ58A44 107 aa3.61□□□□□ -1.83
ECHDC1-215ENST00000475319 IGKV2-24A0A0C4DH68 120 aa3.6□□□□□ -1.83
ECHDC1-215ENST00000475319 ANGP03950 147 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-215ENST00000475319 DNHD1Q96M86 4753 aa3.6□□□□□ -1.83
ECHDC1-215ENST00000475319 DEFB116Q30KQ4 102 aa3.6□□□□□ -1.83
ECHDC1-215ENST00000475319 SPINT4Q6UDR6 99 aa3.6□□□□□ -1.83
ECHDC1-215ENST00000475319 ZANQ9Y493 2812 aa3.59□□□□□ -1.83
ECHDC1-215ENST00000475319 LYNX1G3V0Z9 82 aa3.58□□□□□ -1.84
ECHDC1-215ENST00000475319 G3V318 75 aa3.58□□□□□ -1.84
ECHDC1-215ENST00000475319 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
ECHDC1-215ENST00000475319 FBN1P35555 2871 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-215ENST00000475319 HTN1P15515 57 aa3.57□□□□□ -1.84
ECHDC1-215ENST00000475319 CAMK2N1Q7Z7J9 78 aa3.57□□□□□ -1.84
ECHDC1-215ENST00000475319 C6orf48Q9UBA6 75 aa3.57□□□□□ -1.84
ECHDC1-215ENST00000475319 A0A087WTM6 91 aa3.56□□□□□ -1.84
ECHDC1-215ENST00000475319 LYNX1P0DP58 116 aa3.56□□□□□ -1.84
ECHDC1-215ENST00000475319 C14orf177Q52M58 125 aa3.56□□□□□ -1.84
ECHDC1-215ENST00000475319 ZNF469Q96JG9 3925 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-215ENST00000475319 WNK2Q9Y3S1 2297 aa3.55□□□□□ -1.84
ECHDC1-215ENST00000475319 ANK3Q12955 4377 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-215ENST00000475319 DEFB131AP59861 70 aa3.54□□□□□ -1.84
ECHDC1-215ENST00000475319 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
ECHDC1-215ENST00000475319 C5orf56Q8N8D9 126 aa3.54□□□□□ -1.84
ECHDC1-215ENST00000475319 DEFB105AQ8NG35 78 aa3.54□□□□□ -1.84
ECHDC1-215ENST00000475319 SORL1Q92673 2214 aa3.54□□□□□ -1.84
ECHDC1-215ENST00000475319 MMP24-AS1A0A0U1RRL7 71 aa3.54□□□□□ -1.84
ECHDC1-215ENST00000475319 A0A1B0GVX0 72 aa3.54□□□□□ -1.84
ECHDC1-215ENST00000475319 LINC00304Q8N9R0 145 aa3.54□□□□□ -1.84
ECHDC1-215ENST00000475319 CIRBP-AS1Q8TBR5 109 aa3.54□□□□□ -1.84
ECHDC1-215ENST00000475319 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
ECHDC1-215ENST00000475319 MGAM2Q2M2H8 2515 aa3.53□□□□□ -1.84
ECHDC1-215ENST00000475319 GIG44P09565 113 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-215ENST00000475319 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
ECHDC1-215ENST00000475319 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
ECHDC1-215ENST00000475319 TYMSOSQ8TAI1 123 aa3.52□□□□□ -1.85
ECHDC1-215ENST00000475319 FAM168BA1KXE4 195 aa3.51□□□□□ -1.85
ECHDC1-215ENST00000475319 UNQ6190/PRO20217Q6UXQ8 127 aa3.51□□□□□ -1.85
ECHDC1-215ENST00000475319 PANO1I0J062 215 aa3.5□□□□□ -1.85
ECHDC1-215ENST00000475319 Q6ZRX8 168 aa3.5□□□□□ -1.85
ECHDC1-215ENST00000475319 ANAPC11Q9NYG5 84 aa3.5□□□□□ -1.85
ECHDC1-215ENST00000475319 VPS13CQ709C8 3753 aa3.5□□□□□ -1.85
ECHDC1-215ENST00000475319 ANK2Q01484 3957 aa3.5□□□□□ -1.85
ECHDC1-215ENST00000475319 CLPSL2Q6UWE3 100 aa3.49□□□□□ -1.85
ECHDC1-215ENST00000475319 IGFL1Q6UW32 110 aa3.49□□□□□ -1.85
ECHDC1-215ENST00000475319 KRTAP11-1Q8IUC1 163 aa3.49□□□□□ -1.85
ECHDC1-215ENST00000475319 Q96NJ1 140 aa3.49□□□□□ -1.85
ECHDC1-215ENST00000475319 LY6G6CO95867 125 aa3.48□□□□□ -1.85
ECHDC1-215ENST00000475319 RPL37AP61513 92 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-215ENST00000475319 C15orf56Q8N910 161 aa3.48□□□□□ -1.85
ECHDC1-215ENST00000475319 C16orf74Q96GX8 76 aa3.48□□□□□ -1.85
ECHDC1-215ENST00000475319 BRD3OSQ6XYD6 125 aa3.47□□□□□ -1.85
ECHDC1-215ENST00000475319 SSBP3-AS1Q7Z2R9 100 aa3.47□□□□□ -1.85
ECHDC1-215ENST00000475319 SPRR1AP35321 89 aa3.46□□□□□ -1.86
ECHDC1-215ENST00000475319 NBDYA0A0U1RRE5 68 aa3.45□□□□□ -1.86
ECHDC1-215ENST00000475319 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
ECHDC1-215ENST00000475319 TENM1Q9UKZ4 2725 aa3.44□□□□□ -1.86
ECHDC1-215ENST00000475319 C4orf3Q8WVX3 66 aa3.44□□□□□ -1.86
ECHDC1-215ENST00000475319 MRPL34Q9BQ48 92 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-215ENST00000475319 WNK1Q9H4A3 2382 aa3.43□□□□□ -1.86
ECHDC1-215ENST00000475319 NOTCH1P46531 2555 aa3.43□□□□□ -1.86
ECHDC1-215ENST00000475319 H3BUX3 64 aa3.43□□□□□ -1.86
ECHDC1-215ENST00000475319 NOP10Q9NPE3 64 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-215ENST00000475319 TGP01266 2768 aa3.42□□□□□ -1.86
ECHDC1-215ENST00000475319 MEGF8Q7Z7M0 2845 aa3.42□□□□□ -1.86
ECHDC1-215ENST00000475319 LY6EQ16553 131 aa3.41□□□□□ -1.86
ECHDC1-215ENST00000475319 PSORS1C2Q9UIG4 136 aa3.41□□□□□ -1.86
ECHDC1-215ENST00000475319 PKD1L1Q8TDX9 2849 aa3.4□□□□□ -1.86
ECHDC1-215ENST00000475319 A0A1W2PNN7 141 aa3.4□□□□□ -1.86
ECHDC1-215ENST00000475319 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
ECHDC1-215ENST00000475319 NOTCH3Q9UM47 2321 aa3.38□□□□□ -1.87
ECHDC1-215ENST00000475319 ALMS1Q8TCU4 4167 aa3.38□□□□□ -1.87
ECHDC1-215ENST00000475319 A0A0G2JQZ4 141 aa3.38□□□□□ -1.87
ECHDC1-215ENST00000475319 H0YAA0 97 aa3.38□□□□□ -1.87
ECHDC1-215ENST00000475319 KRTAP10-3P60369 221 aa3.38□□□□□ -1.87
ECHDC1-215ENST00000475319 CUBNO60494 3623 aa3.37□□□□□ -1.87
ECHDC1-215ENST00000475319 VWFP04275 2813 aa3.37□□□□□ -1.87
ECHDC1-215ENST00000475319 A0A1B0GU33 70 aa3.37□□□□□ -1.87
ECHDC1-215ENST00000475319 SPRR1BP22528 89 aa3.37□□□□□ -1.87
ECHDC1-215ENST00000475319 KRTAP13-3Q3SY46 172 aa3.37□□□□□ -1.87
ECHDC1-215ENST00000475319 PRO0255Q9UI72 69 aa3.37□□□□□ -1.87
ECHDC1-215ENST00000475319 K7EIL1 84 aa3.34□□□□□ -1.88
ECHDC1-215ENST00000475319 LELP1Q5T871 98 aa3.34□□□□□ -1.88
ECHDC1-215ENST00000475319 Q6ZSA8 131 aa3.34□□□□□ -1.88
ECHDC1-215ENST00000475319 DEFB136Q30KP8 78 aa3.33□□□□□ -1.88
ECHDC1-215ENST00000475319 CRIPTQ9P021 101 aa3.33□□□□□ -1.88
ECHDC1-215ENST00000475319 TRRAPQ9Y4A5 3859 aa3.32□□□□□ -1.88
ECHDC1-215ENST00000475319 TPRXLQ17RH7 258 aa3.32□□□□□ -1.88
ECHDC1-215ENST00000475319 COX6B2Q6YFQ2 88 aa3.32□□□□□ -1.88
ECHDC1-215ENST00000475319 MT3P25713 68 aa3.31□□□□□ -1.88
ECHDC1-215ENST00000475319 SVEP1Q4LDE5 3571 aa3.31□□□□□ -1.88
ECHDC1-215ENST00000475319 H1FX-AS1Q4G0G2 97 aa3.3□□□□□ -1.88
ECHDC1-215ENST00000475319 PRKDCP78527 4128 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-215ENST00000475319 CMYA5Q8N3K9 4069 aa3.29□□□□□ -1.88
ECHDC1-215ENST00000475319 TENM3Q9P273 2699 aa3.29□□□□□ -1.88
ECHDC1-215ENST00000475319 NBEAL2Q6ZNJ1 2754 aa3.28□□□□□ -1.88
ECHDC1-215ENST00000475319 DEFB130BP0DP73 79 aa3.26□□□□□ -1.89
ECHDC1-215ENST00000475319 DEFB130AP0DP74 79 aa3.26□□□□□ -1.89
ECHDC1-215ENST00000475319 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
ECHDC1-215ENST00000475319 A0A096LPF7 62 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 359.9 ms