RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 IGKV3D-7A0A0C4DH55 119 aa12.47□□□□□ -0.41
PAXBP1-208ENST00000472588 PRR4Q16378 134 aa12.47□□□□□ -0.41
PAXBP1-208ENST00000472588 IGLV7-46A0A075B6I9 117 aa12.45□□□□□ -0.42
PAXBP1-208ENST00000472588 A0A1B0GVX0 72 aa12.45□□□□□ -0.42
PAXBP1-208ENST00000472588 PRR15Q8IV56 129 aa12.45□□□□□ -0.42
PAXBP1-208ENST00000472588 K7EQZ3 153 aa12.43□□□□□ -0.42
PAXBP1-208ENST00000472588 IGHV6-1A0A0B4J1U7 121 aa12.42□□□□□ -0.42
PAXBP1-208ENST00000472588 C8orf87E5RJ46 101 aa12.4□□□□□ -0.42
PAXBP1-208ENST00000472588 Q8N9L7 120 aa12.39□□□□□ -0.43
PAXBP1-208ENST00000472588 LINC00313P59037 77 aa12.37□□□□□ -0.43
PAXBP1-208ENST00000472588 HIST1H4AP62805 103 aaKnown RBP12.37□□□□□ -0.43
PAXBP1-208ENST00000472588 IMUPQ9GZP8 106 aa12.35□□□□□ -0.43
PAXBP1-208ENST00000472588 C8orf17Q9NRJ1 99 aa12.34□□□□□ -0.43
PAXBP1-208ENST00000472588 MT-ATP8P03928 68 aa12.33□□□□□ -0.44
PAXBP1-208ENST00000472588 TPRXLQ17RH7 258 aa12.32□□□□□ -0.44
PAXBP1-208ENST00000472588 KRTAP13-3Q3SY46 172 aa12.3□□□□□ -0.44
PAXBP1-208ENST00000472588 C9orf92A6NGG3 77 aa12.29□□□□□ -0.44
PAXBP1-208ENST00000472588 MMP24-AS1A0A0U1RRL7 71 aa12.28□□□□□ -0.44
PAXBP1-208ENST00000472588 HCG22E2RYF7 251 aa12.28□□□□□ -0.44
PAXBP1-208ENST00000472588 NOTCH2NLQ7Z3S9 236 aa12.27□□□□□ -0.45
PAXBP1-208ENST00000472588 hDV103S1A0JD37 113 aa12.26□□□□□ -0.45
PAXBP1-208ENST00000472588 CASC2Q6XLA1 102 aa12.24□□□□□ -0.45
PAXBP1-208ENST00000472588 A0A087WVE0 104 aa12.22□□□□□ -0.45
PAXBP1-208ENST00000472588 TMEM254Q8TBM7 123 aa12.22□□□□□ -0.45
PAXBP1-208ENST00000472588 WFDC13Q8IUB5 93 aa12.21□□□□□ -0.45
PAXBP1-208ENST00000472588 MRPL34Q9BQ48 92 aaKnown RBP12.2□□□□□ -0.46
PAXBP1-208ENST00000472588 KRTAP16-1A8MUX0 517 aa12.19□□□□□ -0.46
PAXBP1-208ENST00000472588 LRP2P98164 4655 aa12.18□□□□□ -0.46
PAXBP1-208ENST00000472588 XP32Q5T750 250 aa12.14□□□□□ -0.47
PAXBP1-208ENST00000472588 Q8N9P0 234 aaPredicted RBP12.12□□□□□ -0.47
PAXBP1-208ENST00000472588 C20orf166-AS1Q96NR2 134 aa12.12□□□□□ -0.47
PAXBP1-208ENST00000472588 A8MUU9 505 aa12.1□□□□□ -0.47
PAXBP1-208ENST00000472588 Q75L30 129 aa12.1□□□□□ -0.47
PAXBP1-208ENST00000472588 LPAP08519 4548 aa12.09□□□□□ -0.47
PAXBP1-208ENST00000472588 NDUFS5O43920 106 aa12.09□□□□□ -0.47
PAXBP1-208ENST00000472588 UBR4Q5T4S7 5183 aa12.08□□□□□ -0.48
PAXBP1-208ENST00000472588 SCGB1A1P11684 91 aa12.07□□□□□ -0.48
PAXBP1-208ENST00000472588 FAM236AA0A1B0GUQ0 79 aa12.05□□□□□ -0.48
PAXBP1-208ENST00000472588 FAM236BA0A1B0GV22 79 aa12.05□□□□□ -0.48
PAXBP1-208ENST00000472588 RPL37P61927 97 aaKnown RBP12.04□□□□□ -0.48
PAXBP1-208ENST00000472588 TP53AIP1Q9HCN2 124 aa12.03□□□□□ -0.48
PAXBP1-208ENST00000472588 ATP11AUNQ6ZP68 121 aa11.99□□□□□ -0.49
PAXBP1-208ENST00000472588 ATOX1O00244 68 aa11.95□□□□□ -0.5
PAXBP1-208ENST00000472588 SMIM20Q8N5G0 67 aa11.95□□□□□ -0.5
PAXBP1-208ENST00000472588 SEC61BP60468 96 aaKnown RBP11.94□□□□□ -0.5
PAXBP1-208ENST00000472588 UQCRQO14949 82 aa11.93□□□□□ -0.5
PAXBP1-208ENST00000472588 ZCCHC13Q8WW36 166 aaKnown RBP11.93□□□□□ -0.5
PAXBP1-208ENST00000472588 OCR1Q9BZK8 76 aa11.92□□□□□ -0.5
PAXBP1-208ENST00000472588 PCOTHQ58A44 107 aa11.85□□□□□ -0.51
PAXBP1-208ENST00000472588 TRAV7A0A075B6U4 112 aa11.84□□□□□ -0.51
PAXBP1-208ENST00000472588 TRAV22A0A0B4J277 110 aa11.84□□□□□ -0.51
PAXBP1-208ENST00000472588 C5orf47Q569G3 176 aa11.82□□□□□ -0.52
PAXBP1-208ENST00000472588 Q5W150 140 aa11.82□□□□□ -0.52
PAXBP1-208ENST00000472588 RNF213Q63HN8 5207 aa11.8□□□□□ -0.52
PAXBP1-208ENST00000472588 MP68P56378 58 aa11.77□□□□□ -0.52
PAXBP1-208ENST00000472588 H0Y9P7 68 aa11.77□□□□□ -0.53
PAXBP1-208ENST00000472588 SERP2Q8N6R1 65 aa11.77□□□□□ -0.53
PAXBP1-208ENST00000472588 H3BPC8 53 aa11.71□□□□□ -0.53
PAXBP1-208ENST00000472588 ANAPC13Q9BS18 74 aa11.7□□□□□ -0.54
PAXBP1-208ENST00000472588 LOC101927531A0A1B0GV80 90 aa11.69□□□□□ -0.54
PAXBP1-208ENST00000472588 MUC17Q685J3 4493 aa11.68□□□□□ -0.54
PAXBP1-208ENST00000472588 C7orf65Q6ZTY9 151 aa11.68□□□□□ -0.54
PAXBP1-208ENST00000472588 LINC00208Q96KT6 92 aa11.67□□□□□ -0.54
PAXBP1-208ENST00000472588 IGKV2D-30A0A075B6S6 120 aa11.66□□□□□ -0.54
PAXBP1-208ENST00000472588 IGKV2-30P06310 120 aa11.66□□□□□ -0.54
PAXBP1-208ENST00000472588 SPINK7P58062 85 aa11.66□□□□□ -0.54
PAXBP1-208ENST00000472588 C1orf64Q8NEQ6 169 aa11.66□□□□□ -0.54
PAXBP1-208ENST00000472588 COX7CP15954 63 aa11.65□□□□□ -0.54
PAXBP1-208ENST00000472588 CYP4F30PQ9H0H9 118 aa11.59□□□□□ -0.55
PAXBP1-208ENST00000472588 C20orf197Q8N268 126 aa11.56□□□□□ -0.56
PAXBP1-208ENST00000472588 MUC2Q02817 5179 aa11.55□□□□□ -0.56
PAXBP1-208ENST00000472588 A0A0U1RQV1 116 aa11.55□□□□□ -0.56
PAXBP1-208ENST00000472588 KRTAP4-1Q9BYQ7 146 aa11.52□□□□□ -0.56
PAXBP1-208ENST00000472588 KLKP1Q107X0 134 aa11.5□□□□□ -0.57
PAXBP1-208ENST00000472588 SNURFQ9Y675 71 aa11.49□□□□□ -0.57
PAXBP1-208ENST00000472588 HRES1P13985 223 aa11.45□□□□□ -0.58
PAXBP1-208ENST00000472588 RBM12B-AS1Q9P1G2 102 aa11.43□□□□□ -0.58
PAXBP1-208ENST00000472588 NDUFC1O43677 76 aa11.39□□□□□ -0.59
PAXBP1-208ENST00000472588 CCDC179H3BU77 68 aa11.38□□□□□ -0.59
PAXBP1-208ENST00000472588 MPLKIPQ8TAP9 179 aa11.37□□□□□ -0.59
PAXBP1-208ENST00000472588 C4orf26Q17RF5 130 aa11.35□□□□□ -0.59
PAXBP1-208ENST00000472588 COX6B2Q6YFQ2 88 aa11.32□□□□□ -0.6
PAXBP1-208ENST00000472588 FAM236DA0A1B0GTK5 79 aa11.3□□□□□ -0.6
PAXBP1-208ENST00000472588 FAM236CP0DP71 79 aa11.3□□□□□ -0.6
PAXBP1-208ENST00000472588 PCP4P48539 62 aa11.29□□□□□ -0.6
PAXBP1-208ENST00000472588 FAT4Q6V0I7 4981 aa11.26□□□□□ -0.61
PAXBP1-208ENST00000472588 SPANXA2-OT1Q8N9U9 137 aa11.26□□□□□ -0.61
PAXBP1-208ENST00000472588 H7BZZ5 65 aa11.25□□□□□ -0.61
PAXBP1-208ENST00000472588 A8MUN3 132 aa11.23□□□□□ -0.61
PAXBP1-208ENST00000472588 CYSTM1Q9H1C7 97 aa11.23□□□□□ -0.61
PAXBP1-208ENST00000472588 KRTAP19-2Q3LHN2 52 aa11.17□□□□□ -0.62
PAXBP1-208ENST00000472588 H1FX-AS1Q4G0G2 97 aa11.17□□□□□ -0.62
PAXBP1-208ENST00000472588 DMAC1Q96GE9 116 aa11.16□□□□□ -0.62
PAXBP1-208ENST00000472588 KRTAP3-1Q9BYR8 98 aa11.16□□□□□ -0.62
PAXBP1-208ENST00000472588 LCE2AQ5TA79 106 aaPredicted RBP11.14□□□□□ -0.63
PAXBP1-208ENST00000472588 ACYP2P14621 99 aa11.09□□□□□ -0.63
PAXBP1-208ENST00000472588 TMEM258P61165 79 aa11.08□□□□□ -0.64
PAXBP1-208ENST00000472588 LCE2CQ5TA81 110 aa11.07□□□□□ -0.64
PAXBP1-208ENST00000472588 ATP5EP56381 51 aaPredicted RBP11.06□□□□□ -0.64
PAXBP1-208ENST00000472588 S4R3F8 94 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms