RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
SND1-208ENST00000470463 APOBP04114 4563 aaKnown RBP6.37□□□□□ -1.39
SND1-208ENST00000470463 A0A1B0GVX0 72 aa6.37□□□□□ -1.39
SND1-208ENST00000470463 CASC2Q6XLA1 102 aa6.37□□□□□ -1.39
SND1-208ENST00000470463 C8orf87E5RJ46 101 aa6.36□□□□□ -1.39
SND1-208ENST00000470463 J3QL48 77 aa6.36□□□□□ -1.39
SND1-208ENST00000470463 Q5VSD8 79 aa6.36□□□□□ -1.39
SND1-208ENST00000470463 PRR26Q8N8Z3 221 aa6.36□□□□□ -1.39
SND1-208ENST00000470463 hDV103S1A0JD37 113 aa6.34□□□□□ -1.39
SND1-208ENST00000470463 KRTAP29-1A8MX34 341 aaPredicted RBP6.34□□□□□ -1.39
SND1-208ENST00000470463 OCR1Q9BZK8 76 aa6.34□□□□□ -1.39
SND1-208ENST00000470463 MMP24-AS1A0A0U1RRL7 71 aa6.33□□□□□ -1.4
SND1-208ENST00000470463 CCDC179H3BU77 68 aa6.33□□□□□ -1.4
SND1-208ENST00000470463 TP53AIP1Q9HCN2 124 aa6.33□□□□□ -1.4
SND1-208ENST00000470463 C8orf17Q9NRJ1 99 aa6.33□□□□□ -1.4
SND1-208ENST00000470463 IGHV6-1A0A0B4J1U7 121 aa6.32□□□□□ -1.4
SND1-208ENST00000470463 C5orf47Q569G3 176 aa6.32□□□□□ -1.4
SND1-208ENST00000470463 C1orf195Q5TG92 126 aa6.32□□□□□ -1.4
SND1-208ENST00000470463 WFDC13Q8IUB5 93 aa6.32□□□□□ -1.4
SND1-208ENST00000470463 TMEM254Q8TBM7 123 aa6.31□□□□□ -1.4
SND1-208ENST00000470463 NDUFC1O43677 76 aa6.29□□□□□ -1.4
SND1-208ENST00000470463 KLKP1Q107X0 134 aa6.29□□□□□ -1.4
SND1-208ENST00000470463 H3BPC8 53 aa6.28□□□□□ -1.4
SND1-208ENST00000470463 C20orf197Q8N268 126 aa6.28□□□□□ -1.4
SND1-208ENST00000470463 MRPL34Q9BQ48 92 aaKnown RBP6.28□□□□□ -1.4
SND1-208ENST00000470463 MYCBP2O75592 4640 aa6.28□□□□□ -1.4
SND1-208ENST00000470463 VPS13BQ7Z7G8 4022 aa6.28□□□□□ -1.4
SND1-208ENST00000470463 MP68P56378 58 aa6.27□□□□□ -1.41
SND1-208ENST00000470463 LINC00313P59037 77 aa6.27□□□□□ -1.41
SND1-208ENST00000470463 FAT1Q14517 4588 aa6.26□□□□□ -1.41
SND1-208ENST00000470463 FLG2Q5D862 2391 aaPredicted RBP6.23□□□□□ -1.41
SND1-208ENST00000470463 KRTAP10-8P60410 259 aa6.23□□□□□ -1.41
SND1-208ENST00000470463 TMEM258P61165 79 aa6.23□□□□□ -1.41
SND1-208ENST00000470463 TRAV22A0A0B4J277 110 aa6.22□□□□□ -1.41
SND1-208ENST00000470463 A0A0U1RQV1 116 aa6.22□□□□□ -1.41
SND1-208ENST00000470463 NDUFS5O43920 106 aa6.22□□□□□ -1.41
SND1-208ENST00000470463 OXTP01178 125 aa6.2□□□□□ -1.42
SND1-208ENST00000470463 H0Y9P7 68 aa6.19□□□□□ -1.42
SND1-208ENST00000470463 Q8N9P0 234 aaPredicted RBP6.19□□□□□ -1.42
SND1-208ENST00000470463 HMCN2Q8NDA2 5059 aa6.19□□□□□ -1.42
SND1-208ENST00000470463 ATP5EP56381 51 aaPredicted RBP6.18□□□□□ -1.42
SND1-208ENST00000470463 SNURFQ9Y675 71 aa6.18□□□□□ -1.42
SND1-208ENST00000470463 FP248Q71RG6 208 aaPredicted RBP6.17□□□□□ -1.42
SND1-208ENST00000470463 NOTCH2NLQ7Z3S9 236 aa6.17□□□□□ -1.42
SND1-208ENST00000470463 H7BZZ5 65 aa6.16□□□□□ -1.42
SND1-208ENST00000470463 ZCCHC13Q8WW36 166 aaKnown RBP6.16□□□□□ -1.42
SND1-208ENST00000470463 LINC00208Q96KT6 92 aa6.15□□□□□ -1.42
SND1-208ENST00000470463 C1orf64Q8NEQ6 169 aa6.14□□□□□ -1.43
SND1-208ENST00000470463 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
SND1-208ENST00000470463 LOC101927531A0A1B0GV80 90 aa6.12□□□□□ -1.43
SND1-208ENST00000470463 CYSTM1Q9H1C7 97 aa6.12□□□□□ -1.43
SND1-208ENST00000470463 FAM236DA0A1B0GTK5 79 aa6.11□□□□□ -1.43
SND1-208ENST00000470463 FAM236CP0DP71 79 aa6.11□□□□□ -1.43
SND1-208ENST00000470463 SPANXA2-OT1Q8N9U9 137 aa6.09□□□□□ -1.43
SND1-208ENST00000470463 MT1HL1P0DM35 61 aa6.08□□□□□ -1.44
SND1-208ENST00000470463 RPS28P62857 69 aaKnown RBP6.07□□□□□ -1.44
SND1-208ENST00000470463 C20orf166-AS1Q96NR2 134 aa6.07□□□□□ -1.44
SND1-208ENST00000470463 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
SND1-208ENST00000470463 PKHD1L1Q86WI1 4243 aa6.06□□□□□ -1.44
SND1-208ENST00000470463 A8MUU9 505 aa6.05□□□□□ -1.44
SND1-208ENST00000470463 RETNLBQ9BQ08 111 aa6.05□□□□□ -1.44
SND1-208ENST00000470463 Q5W150 140 aa6.04□□□□□ -1.44
SND1-208ENST00000470463 RNF213Q63HN8 5207 aa6.04□□□□□ -1.44
SND1-208ENST00000470463 IGLV7-46A0A075B6I9 117 aa6.03□□□□□ -1.44
SND1-208ENST00000470463 Q75L30 129 aa6.03□□□□□ -1.44
SND1-208ENST00000470463 C9orf92A6NGG3 77 aa6.02□□□□□ -1.45
SND1-208ENST00000470463 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
SND1-208ENST00000470463 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
SND1-208ENST00000470463 IGKV2-30P06310 120 aa6□□□□□ -1.45
SND1-208ENST00000470463 LRP1Q07954 4544 aaKnown RBP5.99□□□□□ -1.45
SND1-208ENST00000470463 C7orf65Q6ZTY9 151 aa5.97□□□□□ -1.45
SND1-208ENST00000470463 TPRXLQ17RH7 258 aa5.96□□□□□ -1.46
SND1-208ENST00000470463 PCOTHQ58A44 107 aa5.96□□□□□ -1.46
SND1-208ENST00000470463 PRR4Q16378 134 aa5.95□□□□□ -1.46
SND1-208ENST00000470463 ATP11AUNQ6ZP68 121 aa5.95□□□□□ -1.46
SND1-208ENST00000470463 FAT3Q8TDW7 4589 aa5.94□□□□□ -1.46
SND1-208ENST00000470463 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
SND1-208ENST00000470463 RPL37P61927 97 aaKnown RBP5.92□□□□□ -1.46
SND1-208ENST00000470463 HRES1P13985 223 aa5.9□□□□□ -1.46
SND1-208ENST00000470463 XP32Q5T750 250 aa5.9□□□□□ -1.46
SND1-208ENST00000470463 LRP2P98164 4655 aa5.9□□□□□ -1.47
SND1-208ENST00000470463 ACYP2P14621 99 aa5.89□□□□□ -1.47
SND1-208ENST00000470463 TNXBP22105 4242 aa5.89□□□□□ -1.47
SND1-208ENST00000470463 SMIM26A0A096LP01 95 aa5.88□□□□□ -1.47
SND1-208ENST00000470463 A8MUN3 132 aa5.87□□□□□ -1.47
SND1-208ENST00000470463 DMAC1Q96GE9 116 aa5.87□□□□□ -1.47
SND1-208ENST00000470463 SPINK7P58062 85 aa5.85□□□□□ -1.47
SND1-208ENST00000470463 COA5Q86WW8 74 aa5.83□□□□□ -1.48
SND1-208ENST00000470463 V9GYY9 64 aa5.81□□□□□ -1.48
SND1-208ENST00000470463 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
SND1-208ENST00000470463 SEC61BP60468 96 aaKnown RBP5.77□□□□□ -1.49
SND1-208ENST00000470463 C4orf26Q17RF5 130 aa5.75□□□□□ -1.49
SND1-208ENST00000470463 Q1T7F1 81 aa5.74□□□□□ -1.49
SND1-208ENST00000470463 COX6B2Q6YFQ2 88 aa5.74□□□□□ -1.49
SND1-208ENST00000470463 SPTSSBQ8NFR3 76 aa5.74□□□□□ -1.49
SND1-208ENST00000470463 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
SND1-208ENST00000470463 FAT4Q6V0I7 4981 aa5.69□□□□□ -1.5
SND1-208ENST00000470463 MPLKIPQ8TAP9 179 aa5.68□□□□□ -1.5
SND1-208ENST00000470463 RBM12B-AS1Q9P1G2 102 aa5.68□□□□□ -1.5
SND1-208ENST00000470463 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms