RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 LINC00304Q8N9R0 145 aa9.79□□□□□ -0.84
EXOSC3-203ENST00000465229 OCR1Q9BZK8 76 aa9.79□□□□□ -0.84
EXOSC3-203ENST00000465229 A8MWP4 228 aa9.78□□□□□ -0.84
EXOSC3-203ENST00000465229 DEFB116Q30KQ4 102 aa9.78□□□□□ -0.84
EXOSC3-203ENST00000465229 HCG22E2RYF7 251 aa9.78□□□□□ -0.84
EXOSC3-203ENST00000465229 CD164Q04900 197 aa9.78□□□□□ -0.84
EXOSC3-203ENST00000465229 PRR15Q8IV56 129 aa9.77□□□□□ -0.85
EXOSC3-203ENST00000465229 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
EXOSC3-203ENST00000465229 Q96NJ1 140 aa9.75□□□□□ -0.85
EXOSC3-203ENST00000465229 KLKP1Q107X0 134 aa9.74□□□□□ -0.85
EXOSC3-203ENST00000465229 SPAG11AQ6PDA7 123 aa9.74□□□□□ -0.85
EXOSC3-203ENST00000465229 HRCT1Q6UXD1 115 aa9.74□□□□□ -0.85
EXOSC3-203ENST00000465229 C20orf197Q8N268 126 aa9.74□□□□□ -0.85
EXOSC3-203ENST00000465229 NDUFB1O75438 58 aa9.71□□□□□ -0.85
EXOSC3-203ENST00000465229 SPINK1P00995 79 aa9.71□□□□□ -0.85
EXOSC3-203ENST00000465229 CYSTM1Q9H1C7 97 aa9.71□□□□□ -0.85
EXOSC3-203ENST00000465229 TMEM258P61165 79 aa9.69□□□□□ -0.86
EXOSC3-203ENST00000465229 ASB16-AS1Q495Z4 193 aa9.67□□□□□ -0.86
EXOSC3-203ENST00000465229 TMEM254Q8TBM7 123 aa9.67□□□□□ -0.86
EXOSC3-203ENST00000465229 NDUFC1O43677 76 aa9.66□□□□□ -0.86
EXOSC3-203ENST00000465229 RPS29P62273 56 aaKnown RBP9.66□□□□□ -0.86
EXOSC3-203ENST00000465229 CASC2Q6XLA1 102 aa9.65□□□□□ -0.86
EXOSC3-203ENST00000465229 WFDC13Q8IUB5 93 aa9.64□□□□□ -0.87
EXOSC3-203ENST00000465229 HERC1Q15751 4861 aa9.64□□□□□ -0.87
EXOSC3-203ENST00000465229 Q5XG85 94 aa9.64□□□□□ -0.87
EXOSC3-203ENST00000465229 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
EXOSC3-203ENST00000465229 MMP24-AS1A0A0U1RRL7 71 aa9.63□□□□□ -0.87
EXOSC3-203ENST00000465229 H7BZZ5 65 aa9.62□□□□□ -0.87
EXOSC3-203ENST00000465229 C5orf47Q569G3 176 aa9.62□□□□□ -0.87
EXOSC3-203ENST00000465229 SNURFQ9Y675 71 aa9.62□□□□□ -0.87
EXOSC3-203ENST00000465229 A0A1B0GVX0 72 aa9.61□□□□□ -0.87
EXOSC3-203ENST00000465229 LIMD2Q9BT23 127 aa9.6□□□□□ -0.87
EXOSC3-203ENST00000465229 hDV103S1A0JD37 113 aa9.58□□□□□ -0.88
EXOSC3-203ENST00000465229 C8orf17Q9NRJ1 99 aa9.58□□□□□ -0.88
EXOSC3-203ENST00000465229 RETNLBQ9BQ08 111 aa9.56□□□□□ -0.88
EXOSC3-203ENST00000465229 IGHV6-1A0A0B4J1U7 121 aa9.53□□□□□ -0.88
EXOSC3-203ENST00000465229 C1orf195Q5TG92 126 aa9.53□□□□□ -0.88
EXOSC3-203ENST00000465229 ZCCHC13Q8WW36 166 aaKnown RBP9.53□□□□□ -0.88
EXOSC3-203ENST00000465229 H3BPC8 53 aa9.52□□□□□ -0.89
EXOSC3-203ENST00000465229 RPS28P62857 69 aaKnown RBP9.52□□□□□ -0.89
EXOSC3-203ENST00000465229 FAM236DA0A1B0GTK5 79 aa9.51□□□□□ -0.89
EXOSC3-203ENST00000465229 FAM236CP0DP71 79 aa9.51□□□□□ -0.89
EXOSC3-203ENST00000465229 MP68P56378 58 aa9.51□□□□□ -0.89
EXOSC3-203ENST00000465229 TP53AIP1Q9HCN2 124 aa9.51□□□□□ -0.89
EXOSC3-203ENST00000465229 ATP5EP56381 51 aaPredicted RBP9.5□□□□□ -0.89
EXOSC3-203ENST00000465229 C8orf87E5RJ46 101 aa9.49□□□□□ -0.89
EXOSC3-203ENST00000465229 MRPL34Q9BQ48 92 aaKnown RBP9.48□□□□□ -0.89
EXOSC3-203ENST00000465229 PRR4Q16378 134 aa9.46□□□□□ -0.89
EXOSC3-203ENST00000465229 FP248Q71RG6 208 aaPredicted RBP9.45□□□□□ -0.9
EXOSC3-203ENST00000465229 H0Y9P7 68 aa9.45□□□□□ -0.9
EXOSC3-203ENST00000465229 TRAV22A0A0B4J277 110 aa9.43□□□□□ -0.9
EXOSC3-203ENST00000465229 NOTCH2NLQ7Z3S9 236 aa9.43□□□□□ -0.9
EXOSC3-203ENST00000465229 IGLV7-46A0A075B6I9 117 aa9.42□□□□□ -0.9
EXOSC3-203ENST00000465229 LINC00208Q96KT6 92 aa9.41□□□□□ -0.9
EXOSC3-203ENST00000465229 HMCN2Q8NDA2 5059 aa9.4□□□□□ -0.9
EXOSC3-203ENST00000465229 SERP1Q9Y6X1 66 aa9.39□□□□□ -0.91
EXOSC3-203ENST00000465229 LINC00313P59037 77 aa9.38□□□□□ -0.91
EXOSC3-203ENST00000465229 NDUFS5O43920 106 aa9.37□□□□□ -0.91
EXOSC3-203ENST00000465229 C1orf64Q8NEQ6 169 aa9.36□□□□□ -0.91
EXOSC3-203ENST00000465229 LPAP08519 4548 aa9.35□□□□□ -0.91
EXOSC3-203ENST00000465229 KRTAP13-3Q3SY46 172 aa9.32□□□□□ -0.92
EXOSC3-203ENST00000465229 Q8N9P0 234 aaPredicted RBP9.32□□□□□ -0.92
EXOSC3-203ENST00000465229 TPRXLQ17RH7 258 aa9.31□□□□□ -0.92
EXOSC3-203ENST00000465229 SPANXA2-OT1Q8N9U9 137 aa9.31□□□□□ -0.92
EXOSC3-203ENST00000465229 CYP4F30PQ9H0H9 118 aa9.29□□□□□ -0.92
EXOSC3-203ENST00000465229 LRP2P98164 4655 aa9.29□□□□□ -0.92
EXOSC3-203ENST00000465229 C9orf92A6NGG3 77 aa9.28□□□□□ -0.92
EXOSC3-203ENST00000465229 KRTAP16-1A8MUX0 517 aa9.28□□□□□ -0.92
EXOSC3-203ENST00000465229 LOC101927531A0A1B0GV80 90 aa9.24□□□□□ -0.93
EXOSC3-203ENST00000465229 Q5W150 140 aa9.23□□□□□ -0.93
EXOSC3-203ENST00000465229 XP32Q5T750 250 aa9.19□□□□□ -0.94
EXOSC3-203ENST00000465229 SMIM26A0A096LP01 95 aa9.18□□□□□ -0.94
EXOSC3-203ENST00000465229 PCOTHQ58A44 107 aa9.13□□□□□ -0.95
EXOSC3-203ENST00000465229 IGKV2-30P06310 120 aa9.09□□□□□ -0.95
EXOSC3-203ENST00000465229 C20orf166-AS1Q96NR2 134 aa9.09□□□□□ -0.95
EXOSC3-203ENST00000465229 A8MUU9 505 aa9.08□□□□□ -0.96
EXOSC3-203ENST00000465229 Q75L30 129 aa9.07□□□□□ -0.96
EXOSC3-203ENST00000465229 RPL37P61927 97 aaKnown RBP9.06□□□□□ -0.96
EXOSC3-203ENST00000465229 UBR4Q5T4S7 5183 aa9.02□□□□□ -0.96
EXOSC3-203ENST00000465229 MUC17Q685J3 4493 aa9.01□□□□□ -0.97
EXOSC3-203ENST00000465229 SEC61BP60468 96 aaKnown RBP9□□□□□ -0.97
EXOSC3-203ENST00000465229 HRES1P13985 223 aa8.98□□□□□ -0.97
EXOSC3-203ENST00000465229 COA5Q86WW8 74 aa8.98□□□□□ -0.97
EXOSC3-203ENST00000465229 ATP11AUNQ6ZP68 121 aa8.97□□□□□ -0.97
EXOSC3-203ENST00000465229 C4orf26Q17RF5 130 aa8.96□□□□□ -0.98
EXOSC3-203ENST00000465229 Q1T7F1 81 aa8.95□□□□□ -0.98
EXOSC3-203ENST00000465229 IGKV2D-30A0A075B6S6 120 aa8.94□□□□□ -0.98
EXOSC3-203ENST00000465229 C7orf65Q6ZTY9 151 aa8.94□□□□□ -0.98
EXOSC3-203ENST00000465229 DMAC1Q96GE9 116 aa8.94□□□□□ -0.98
EXOSC3-203ENST00000465229 ACYP2P14621 99 aa8.91□□□□□ -0.98
EXOSC3-203ENST00000465229 V9GYY9 64 aa8.91□□□□□ -0.98
EXOSC3-203ENST00000465229 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
EXOSC3-203ENST00000465229 MUC2Q02817 5179 aa8.88□□□□□ -0.99
EXOSC3-203ENST00000465229 KRTAP4-1Q9BYQ7 146 aa8.87□□□□□ -0.99
EXOSC3-203ENST00000465229 RNF213Q63HN8 5207 aa8.85□□□□□ -0.99
EXOSC3-203ENST00000465229 A8MUN3 132 aa8.8□□□□□ -1
EXOSC3-203ENST00000465229 SPINK7P58062 85 aa8.76□□□□□ -1.01
EXOSC3-203ENST00000465229 CHKB-CPT1BH3BT56 60 aa8.75□□□□□ -1.01
EXOSC3-203ENST00000465229 LINC01558Q9Y6Z2 57 aa8.73□□□□□ -1.01
EXOSC3-203ENST00000465229 PSPHP1O15172 72 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms