RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 A0A1B0GVX0 72 aa7.59□□□□□ -1.19
PHACTR4-203ENST00000463428 A8MWP4 228 aa7.59□□□□□ -1.19
PHACTR4-203ENST00000463428 BPY2O14599 106 aa7.59□□□□□ -1.19
PHACTR4-203ENST00000463428 LRP2P98164 4655 aa7.58□□□□□ -1.2
PHACTR4-203ENST00000463428 IGKV3D-7A0A0C4DH55 119 aa7.58□□□□□ -1.2
PHACTR4-203ENST00000463428 NOTCH2NLQ7Z3S9 236 aa7.58□□□□□ -1.2
PHACTR4-203ENST00000463428 J3QR89 54 aa7.57□□□□□ -1.2
PHACTR4-203ENST00000463428 CDIP1Q9H305 208 aa7.57□□□□□ -1.2
PHACTR4-203ENST00000463428 IGHV6-1A0A0B4J1U7 121 aa7.56□□□□□ -1.2
PHACTR4-203ENST00000463428 XP32Q5T750 250 aa7.56□□□□□ -1.2
PHACTR4-203ENST00000463428 NDUFB1O75438 58 aa7.55□□□□□ -1.2
PHACTR4-203ENST00000463428 LINC00313P59037 77 aa7.55□□□□□ -1.2
PHACTR4-203ENST00000463428 PRR15Q8IV56 129 aa7.55□□□□□ -1.2
PHACTR4-203ENST00000463428 K7EQZ3 153 aa7.54□□□□□ -1.2
PHACTR4-203ENST00000463428 KRTAP16-1A8MUX0 517 aa7.53□□□□□ -1.2
PHACTR4-203ENST00000463428 C8orf87E5RJ46 101 aa7.53□□□□□ -1.2
PHACTR4-203ENST00000463428 CXCL6P80162 114 aa7.52□□□□□ -1.2
PHACTR4-203ENST00000463428 Q8N9L7 120 aa7.52□□□□□ -1.21
PHACTR4-203ENST00000463428 C8orf17Q9NRJ1 99 aa7.51□□□□□ -1.21
PHACTR4-203ENST00000463428 K7ERU9 68 aa7.5□□□□□ -1.21
PHACTR4-203ENST00000463428 LCE2BO14633 110 aa7.5□□□□□ -1.21
PHACTR4-203ENST00000463428 LINC00643Q86TS7 51 aa7.49□□□□□ -1.21
PHACTR4-203ENST00000463428 MMP24-AS1A0A0U1RRL7 71 aa7.48□□□□□ -1.21
PHACTR4-203ENST00000463428 C20orf166-AS1Q96NR2 134 aa7.47□□□□□ -1.21
PHACTR4-203ENST00000463428 A8MUU9 505 aa7.46□□□□□ -1.21
PHACTR4-203ENST00000463428 RPL37P61927 97 aaKnown RBP7.46□□□□□ -1.21
PHACTR4-203ENST00000463428 ATP5EP2Q5VTU8 51 aa7.46□□□□□ -1.21
PHACTR4-203ENST00000463428 Q75L30 129 aa7.45□□□□□ -1.22
PHACTR4-203ENST00000463428 MUC17Q685J3 4493 aa7.44□□□□□ -1.22
PHACTR4-203ENST00000463428 UBR4Q5T4S7 5183 aa7.44□□□□□ -1.22
PHACTR4-203ENST00000463428 Q8N9P0 234 aaPredicted RBP7.42□□□□□ -1.22
PHACTR4-203ENST00000463428 TMEM254Q8TBM7 123 aa7.42□□□□□ -1.22
PHACTR4-203ENST00000463428 hDV103S1A0JD37 113 aa7.41□□□□□ -1.22
PHACTR4-203ENST00000463428 MRPL34Q9BQ48 92 aaKnown RBP7.41□□□□□ -1.22
PHACTR4-203ENST00000463428 HCG22E2RYF7 251 aa7.39□□□□□ -1.23
PHACTR4-203ENST00000463428 SEC61BP60468 96 aaKnown RBP7.39□□□□□ -1.23
PHACTR4-203ENST00000463428 CASC2Q6XLA1 102 aa7.39□□□□□ -1.23
PHACTR4-203ENST00000463428 WFDC13Q8IUB5 93 aa7.39□□□□□ -1.23
PHACTR4-203ENST00000463428 PCOTHQ58A44 107 aa7.38□□□□□ -1.23
PHACTR4-203ENST00000463428 HIST1H4AP62805 103 aaKnown RBP7.35□□□□□ -1.23
PHACTR4-203ENST00000463428 A0A087WVE0 104 aa7.34□□□□□ -1.23
PHACTR4-203ENST00000463428 ATP11AUNQ6ZP68 121 aa7.34□□□□□ -1.23
PHACTR4-203ENST00000463428 KRTAP4-1Q9BYQ7 146 aa7.34□□□□□ -1.23
PHACTR4-203ENST00000463428 MT-ATP8P03928 68 aa7.33□□□□□ -1.24
PHACTR4-203ENST00000463428 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
PHACTR4-203ENST00000463428 ZCCHC13Q8WW36 166 aaKnown RBP7.3□□□□□ -1.24
PHACTR4-203ENST00000463428 IMUPQ9GZP8 106 aa7.29□□□□□ -1.24
PHACTR4-203ENST00000463428 NDUFS5O43920 106 aa7.28□□□□□ -1.24
PHACTR4-203ENST00000463428 MUC2Q02817 5179 aa7.25□□□□□ -1.25
PHACTR4-203ENST00000463428 LOC100996750A0A140TA64 210 aa7.25□□□□□ -1.25
PHACTR4-203ENST00000463428 Q5W150 140 aa7.25□□□□□ -1.25
PHACTR4-203ENST00000463428 KRTAP4-6Q9BYQ5 205 aa7.25□□□□□ -1.25
PHACTR4-203ENST00000463428 TP53AIP1Q9HCN2 124 aa7.22□□□□□ -1.25
PHACTR4-203ENST00000463428 LCE2AQ5TA79 106 aaPredicted RBP7.18□□□□□ -1.26
PHACTR4-203ENST00000463428 OCR1Q9BZK8 76 aa7.17□□□□□ -1.26
PHACTR4-203ENST00000463428 SPINK7P58062 85 aa7.16□□□□□ -1.26
PHACTR4-203ENST00000463428 UQCRQO14949 82 aa7.15□□□□□ -1.27
PHACTR4-203ENST00000463428 FAM236AA0A1B0GUQ0 79 aa7.13□□□□□ -1.27
PHACTR4-203ENST00000463428 FAM236BA0A1B0GV22 79 aa7.13□□□□□ -1.27
PHACTR4-203ENST00000463428 HRES1P13985 223 aa7.12□□□□□ -1.27
PHACTR4-203ENST00000463428 KRTAP19-2Q3LHN2 52 aa7.12□□□□□ -1.27
PHACTR4-203ENST00000463428 SCGB1A1P11684 91 aa7.11□□□□□ -1.27
PHACTR4-203ENST00000463428 TRAV22A0A0B4J277 110 aa7.1□□□□□ -1.27
PHACTR4-203ENST00000463428 IGKV2-30P06310 120 aa7.1□□□□□ -1.27
PHACTR4-203ENST00000463428 MPLKIPQ8TAP9 179 aa7.1□□□□□ -1.27
PHACTR4-203ENST00000463428 IGKV2D-30A0A075B6S6 120 aa7.09□□□□□ -1.28
PHACTR4-203ENST00000463428 C7orf65Q6ZTY9 151 aa7.08□□□□□ -1.28
PHACTR4-203ENST00000463428 H0Y9P7 68 aa7.07□□□□□ -1.28
PHACTR4-203ENST00000463428 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
PHACTR4-203ENST00000463428 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
PHACTR4-203ENST00000463428 TRAV7A0A075B6U4 112 aa7.03□□□□□ -1.28
PHACTR4-203ENST00000463428 ATOX1O00244 68 aa7.03□□□□□ -1.28
PHACTR4-203ENST00000463428 SMIM20Q8N5G0 67 aa7.03□□□□□ -1.28
PHACTR4-203ENST00000463428 FAT4Q6V0I7 4981 aa7.03□□□□□ -1.28
PHACTR4-203ENST00000463428 LOC101927531A0A1B0GV80 90 aa7.02□□□□□ -1.29
PHACTR4-203ENST00000463428 CYP4F30PQ9H0H9 118 aa7.02□□□□□ -1.29
PHACTR4-203ENST00000463428 A0A0U1RQV1 116 aa7.01□□□□□ -1.29
PHACTR4-203ENST00000463428 MP68P56378 58 aa7□□□□□ -1.29
PHACTR4-203ENST00000463428 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
PHACTR4-203ENST00000463428 LINC00208Q96KT6 92 aa7□□□□□ -1.29
PHACTR4-203ENST00000463428 RBM12B-AS1Q9P1G2 102 aa6.99□□□□□ -1.29
PHACTR4-203ENST00000463428 H3BPC8 53 aa6.98□□□□□ -1.29
PHACTR4-203ENST00000463428 COX6B2Q6YFQ2 88 aa6.95□□□□□ -1.3
PHACTR4-203ENST00000463428 SERP2Q8N6R1 65 aa6.95□□□□□ -1.3
PHACTR4-203ENST00000463428 C4orf26Q17RF5 130 aa6.94□□□□□ -1.3
PHACTR4-203ENST00000463428 FLGP20930 4061 aaPredicted RBP6.93□□□□□ -1.3
PHACTR4-203ENST00000463428 KLKP1Q107X0 134 aa6.93□□□□□ -1.3
PHACTR4-203ENST00000463428 FAM236DA0A1B0GTK5 79 aa6.92□□□□□ -1.3
PHACTR4-203ENST00000463428 FAM236CP0DP71 79 aa6.92□□□□□ -1.3
PHACTR4-203ENST00000463428 MT1HP80294 61 aa6.91□□□□□ -1.3
PHACTR4-203ENST00000463428 KRTAP3-1Q9BYR8 98 aa6.91□□□□□ -1.3
PHACTR4-203ENST00000463428 COX7CP15954 63 aa6.87□□□□□ -1.31
PHACTR4-203ENST00000463428 H1FX-AS1Q4G0G2 97 aa6.84□□□□□ -1.31
PHACTR4-203ENST00000463428 C20orf197Q8N268 126 aa6.84□□□□□ -1.31
PHACTR4-203ENST00000463428 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
PHACTR4-203ENST00000463428 SNURFQ9Y675 71 aa6.84□□□□□ -1.31
PHACTR4-203ENST00000463428 ANAPC13Q9BS18 74 aa6.82□□□□□ -1.32
PHACTR4-203ENST00000463428 A8MUN3 132 aa6.75□□□□□ -1.33
PHACTR4-203ENST00000463428 M0R2T5 61 aa6.75□□□□□ -1.33
PHACTR4-203ENST00000463428 CYSTM1Q9H1C7 97 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms