RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 H3BPC8 53 aa8.65□□□□□ -1.02
HDAC6-213ENST00000462730 DEFB116Q30KQ4 102 aa8.63□□□□□ -1.03
HDAC6-213ENST00000462730 MP68P56378 58 aa8.61□□□□□ -1.03
HDAC6-213ENST00000462730 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
HDAC6-213ENST00000462730 SPANXA2-OT1Q8N9U9 137 aa8.6□□□□□ -1.03
HDAC6-213ENST00000462730 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-213ENST00000462730 LINC00472Q9H8W2 130 aa8.57□□□□□ -1.04
HDAC6-213ENST00000462730 KTN1-AS1Q86SY8 53 aa8.56□□□□□ -1.04
HDAC6-213ENST00000462730 WFDC13Q8IUB5 93 aa8.55□□□□□ -1.04
HDAC6-213ENST00000462730 FAT1Q14517 4588 aa8.55□□□□□ -1.04
HDAC6-213ENST00000462730 TRAV22A0A0B4J277 110 aa8.53□□□□□ -1.04
HDAC6-213ENST00000462730 A0A087X002 238 aa8.52□□□□□ -1.05
HDAC6-213ENST00000462730 SSBP3-AS1Q7Z2R9 100 aa8.52□□□□□ -1.05
HDAC6-213ENST00000462730 RBM12B-AS1Q9P1G2 102 aa8.52□□□□□ -1.05
HDAC6-213ENST00000462730 KRTAP29-1A8MX34 341 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-213ENST00000462730 Q96NJ1 140 aa8.52□□□□□ -1.05
HDAC6-213ENST00000462730 A8MWP4 228 aa8.51□□□□□ -1.05
HDAC6-213ENST00000462730 C4orf48Q5BLP8 95 aa8.51□□□□□ -1.05
HDAC6-213ENST00000462730 LIMD2Q9BT23 127 aa8.51□□□□□ -1.05
HDAC6-213ENST00000462730 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
HDAC6-213ENST00000462730 NDUFS5O43920 106 aa8.5□□□□□ -1.05
HDAC6-213ENST00000462730 KRTAP1-4P0C5Y4 121 aa8.5□□□□□ -1.05
HDAC6-213ENST00000462730 PRR4Q16378 134 aa8.49□□□□□ -1.05
HDAC6-213ENST00000462730 SPINK6Q6UWN8 80 aa8.48□□□□□ -1.05
HDAC6-213ENST00000462730 KRTAP10-4P60372 401 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-213ENST00000462730 CASC2Q6XLA1 102 aa8.48□□□□□ -1.05
HDAC6-213ENST00000462730 LINC00208Q96KT6 92 aa8.46□□□□□ -1.05
HDAC6-213ENST00000462730 HSPG2P98160 4391 aa8.45□□□□□ -1.06
HDAC6-213ENST00000462730 EPPK1P58107 5090 aaKnown RBP8.44□□□□□ -1.06
HDAC6-213ENST00000462730 H0Y9P7 68 aa8.44□□□□□ -1.06
HDAC6-213ENST00000462730 CDK2AP2O75956 126 aa8.43□□□□□ -1.06
HDAC6-213ENST00000462730 PLA2G1BP04054 148 aaKnown RBP8.43□□□□□ -1.06
HDAC6-213ENST00000462730 RYR1P21817 5038 aa8.42□□□□□ -1.06
HDAC6-213ENST00000462730 PSPHP1O15172 72 aa8.41□□□□□ -1.06
HDAC6-213ENST00000462730 MMP24-AS1A0A0U1RRL7 71 aa8.41□□□□□ -1.06
HDAC6-213ENST00000462730 ATP11AUNQ6ZP68 121 aa8.41□□□□□ -1.06
HDAC6-213ENST00000462730 A0A1B0GVX0 72 aa8.39□□□□□ -1.07
HDAC6-213ENST00000462730 Q5VV11 94 aa8.39□□□□□ -1.07
HDAC6-213ENST00000462730 IGHV6-1A0A0B4J1U7 121 aa8.38□□□□□ -1.07
HDAC6-213ENST00000462730 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
HDAC6-213ENST00000462730 Q8N9P0 234 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-213ENST00000462730 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
HDAC6-213ENST00000462730 A8MUN3 132 aa8.37□□□□□ -1.07
HDAC6-213ENST00000462730 ASB16-AS1Q495Z4 193 aa8.37□□□□□ -1.07
HDAC6-213ENST00000462730 Q75L30 129 aa8.37□□□□□ -1.07
HDAC6-213ENST00000462730 TP53AIP1Q9HCN2 124 aa8.37□□□□□ -1.07
HDAC6-213ENST00000462730 C8orf17Q9NRJ1 99 aa8.37□□□□□ -1.07
HDAC6-213ENST00000462730 LOC101927531A0A1B0GV80 90 aa8.36□□□□□ -1.07
HDAC6-213ENST00000462730 Q5VSD8 79 aa8.36□□□□□ -1.07
HDAC6-213ENST00000462730 KIAA1109Q2LD37 5005 aa8.36□□□□□ -1.07
HDAC6-213ENST00000462730 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
HDAC6-213ENST00000462730 PRR26Q8N8Z3 221 aa8.35□□□□□ -1.07
HDAC6-213ENST00000462730 A6NN06 94 aa8.34□□□□□ -1.07
HDAC6-213ENST00000462730 PKHD1L1Q86WI1 4243 aa8.33□□□□□ -1.08
HDAC6-213ENST00000462730 CHKB-CPT1BH3BT56 60 aa8.31□□□□□ -1.08
HDAC6-213ENST00000462730 C7orf65Q6ZTY9 151 aa8.3□□□□□ -1.08
HDAC6-213ENST00000462730 NOTCH2NLQ7Z3S9 236 aa8.3□□□□□ -1.08
HDAC6-213ENST00000462730 PRR15LQ9BU68 103 aa8.29□□□□□ -1.08
HDAC6-213ENST00000462730 KRTAP17-1Q9BYP8 105 aa8.29□□□□□ -1.08
HDAC6-213ENST00000462730 LCA10Q71F78 164 aa8.28□□□□□ -1.08
HDAC6-213ENST00000462730 LINC00304Q8N9R0 145 aa8.28□□□□□ -1.08
HDAC6-213ENST00000462730 SPINK1P00995 79 aa8.28□□□□□ -1.08
HDAC6-213ENST00000462730 COA5Q86WW8 74 aa8.28□□□□□ -1.08
HDAC6-213ENST00000462730 A8MU10 97 aa8.26□□□□□ -1.09
HDAC6-213ENST00000462730 C8orf87E5RJ46 101 aa8.26□□□□□ -1.09
HDAC6-213ENST00000462730 MRPL34Q9BQ48 92 aaKnown RBP8.26□□□□□ -1.09
HDAC6-213ENST00000462730 LINC01558Q9Y6Z2 57 aa8.26□□□□□ -1.09
HDAC6-213ENST00000462730 CDC42SE1Q9NRR8 79 aa8.25□□□□□ -1.09
HDAC6-213ENST00000462730 SPAG11AQ6PDA7 123 aa8.23□□□□□ -1.09
HDAC6-213ENST00000462730 Q8N1X5 172 aa8.23□□□□□ -1.09
HDAC6-213ENST00000462730 LRP1Q07954 4544 aaKnown RBP8.23□□□□□ -1.09
HDAC6-213ENST00000462730 PCOTHQ58A44 107 aa8.22□□□□□ -1.09
HDAC6-213ENST00000462730 A6NED7 52 aa8.21□□□□□ -1.09
HDAC6-213ENST00000462730 SPTSSBQ8NFR3 76 aa8.21□□□□□ -1.09
HDAC6-213ENST00000462730 RPS29P62273 56 aaKnown RBP8.21□□□□□ -1.1
HDAC6-213ENST00000462730 LINC00313P59037 77 aa8.19□□□□□ -1.1
HDAC6-213ENST00000462730 TNXBP22105 4242 aa8.17□□□□□ -1.1
HDAC6-213ENST00000462730 FAT3Q8TDW7 4589 aa8.17□□□□□ -1.1
HDAC6-213ENST00000462730 H3BS24 57 aa8.15□□□□□ -1.11
HDAC6-213ENST00000462730 MYCBP2O75592 4640 aa8.13□□□□□ -1.11
HDAC6-213ENST00000462730 KRTAP16-1A8MUX0 517 aa8.11□□□□□ -1.11
HDAC6-213ENST00000462730 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
HDAC6-213ENST00000462730 FLG2Q5D862 2391 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-213ENST00000462730 HRES1P13985 223 aa8.08□□□□□ -1.12
HDAC6-213ENST00000462730 Q5W150 140 aa8.08□□□□□ -1.12
HDAC6-213ENST00000462730 BIRC6Q9NR09 4857 aa8.07□□□□□ -1.12
HDAC6-213ENST00000462730 KRTAP4-5Q9BYR2 181 aa8.06□□□□□ -1.12
HDAC6-213ENST00000462730 KRTAP13-3Q3SY46 172 aa8.06□□□□□ -1.12
HDAC6-213ENST00000462730 RETNLBQ9BQ08 111 aa8.04□□□□□ -1.12
HDAC6-213ENST00000462730 MT1HL1P0DM35 61 aa8.02□□□□□ -1.12
HDAC6-213ENST00000462730 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
HDAC6-213ENST00000462730 ACYP2P14621 99 aa8.01□□□□□ -1.13
HDAC6-213ENST00000462730 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
HDAC6-213ENST00000462730 HERC2O95714 4834 aa7.98□□□□□ -1.13
HDAC6-213ENST00000462730 ABCA13Q86UQ4 5058 aa7.97□□□□□ -1.13
HDAC6-213ENST00000462730 SPINK7P58062 85 aa7.95□□□□□ -1.14
HDAC6-213ENST00000462730 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-213ENST00000462730 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
HDAC6-213ENST00000462730 IGKV2-30P06310 120 aa7.92□□□□□ -1.14
HDAC6-213ENST00000462730 A8MUU9 505 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms