RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 Q96NJ1 140 aa7.48□□□□□ -1.21
COL4A6-204ENST00000461897 RYR3Q15413 4870 aa7.47□□□□□ -1.21
COL4A6-204ENST00000461897 V9GYY9 64 aa7.46□□□□□ -1.22
COL4A6-204ENST00000461897 VPS13BQ7Z7G8 4022 aa7.45□□□□□ -1.22
COL4A6-204ENST00000461897 PRR4Q16378 134 aa7.45□□□□□ -1.22
COL4A6-204ENST00000461897 MOBPQ13875 183 aa7.45□□□□□ -1.22
COL4A6-204ENST00000461897 TP53AIP1Q9HCN2 124 aa7.44□□□□□ -1.22
COL4A6-204ENST00000461897 APOBP04114 4563 aaKnown RBP7.44□□□□□ -1.22
COL4A6-204ENST00000461897 A0A1B0GVY2 172 aa7.43□□□□□ -1.22
COL4A6-204ENST00000461897 ZNF861PO60384 105 aa7.43□□□□□ -1.22
COL4A6-204ENST00000461897 ZNF706Q9Y5V0 76 aaPredicted RBP7.43□□□□□ -1.22
COL4A6-204ENST00000461897 IGLV7-43P04211 117 aa7.42□□□□□ -1.22
COL4A6-204ENST00000461897 IGLV7-46A0A075B6I9 117 aa7.41□□□□□ -1.22
COL4A6-204ENST00000461897 C1orf195Q5TG92 126 aa7.4□□□□□ -1.23
COL4A6-204ENST00000461897 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.23
COL4A6-204ENST00000461897 IGLV9-49A0A0B4J1Y8 123 aa7.39□□□□□ -1.23
COL4A6-204ENST00000461897 A0A1B0GVX0 72 aa7.37□□□□□ -1.23
COL4A6-204ENST00000461897 Q8N9P0 234 aaPredicted RBP7.37□□□□□ -1.23
COL4A6-204ENST00000461897 LIMD2Q9BT23 127 aa7.36□□□□□ -1.23
COL4A6-204ENST00000461897 PSPHP1O15172 72 aa7.36□□□□□ -1.23
COL4A6-204ENST00000461897 Q5VV11 94 aa7.34□□□□□ -1.23
COL4A6-204ENST00000461897 ANAPC11Q9NYG5 84 aa7.34□□□□□ -1.23
COL4A6-204ENST00000461897 FAT1Q14517 4588 aa7.34□□□□□ -1.23
COL4A6-204ENST00000461897 A8MUN3 132 aa7.34□□□□□ -1.23
COL4A6-204ENST00000461897 COA5Q86WW8 74 aa7.32□□□□□ -1.24
COL4A6-204ENST00000461897 MRPL34Q9BQ48 92 aaKnown RBP7.32□□□□□ -1.24
COL4A6-204ENST00000461897 CD164Q04900 197 aa7.32□□□□□ -1.24
COL4A6-204ENST00000461897 IGHV6-1A0A0B4J1U7 121 aa7.3□□□□□ -1.24
COL4A6-204ENST00000461897 LOC101927531A0A1B0GV80 90 aa7.3□□□□□ -1.24
COL4A6-204ENST00000461897 CDK2AP2O75956 126 aa7.3□□□□□ -1.24
COL4A6-204ENST00000461897 PCOTHQ58A44 107 aa7.26□□□□□ -1.25
COL4A6-204ENST00000461897 Q75L30 129 aa7.26□□□□□ -1.25
COL4A6-204ENST00000461897 A0A087X002 238 aa7.25□□□□□ -1.25
COL4A6-204ENST00000461897 SMR3BP02814 79 aaPredicted RBP7.25□□□□□ -1.25
COL4A6-204ENST00000461897 KRTAP13-3Q3SY46 172 aa7.25□□□□□ -1.25
COL4A6-204ENST00000461897 NOTCH2NLQ7Z3S9 236 aa7.25□□□□□ -1.25
COL4A6-204ENST00000461897 NDUFS5O43920 106 aa7.24□□□□□ -1.25
COL4A6-204ENST00000461897 HSPG2P98160 4391 aa7.24□□□□□ -1.25
COL4A6-204ENST00000461897 KRTAP1-4P0C5Y4 121 aa7.24□□□□□ -1.25
COL4A6-204ENST00000461897 PRR15LQ9BU68 103 aa7.24□□□□□ -1.25
COL4A6-204ENST00000461897 LINC01558Q9Y6Z2 57 aa7.23□□□□□ -1.25
COL4A6-204ENST00000461897 RYR1P21817 5038 aa7.22□□□□□ -1.25
COL4A6-204ENST00000461897 CHKB-CPT1BH3BT56 60 aa7.22□□□□□ -1.25
COL4A6-204ENST00000461897 SSBP3-AS1Q7Z2R9 100 aa7.22□□□□□ -1.25
COL4A6-204ENST00000461897 C8orf87E5RJ46 101 aa7.21□□□□□ -1.26
COL4A6-204ENST00000461897 KRTAP13-2Q52LG2 175 aa7.21□□□□□ -1.26
COL4A6-204ENST00000461897 HRES1P13985 223 aa7.2□□□□□ -1.26
COL4A6-204ENST00000461897 KRTAP10-4P60372 401 aaPredicted RBP7.2□□□□□ -1.26
COL4A6-204ENST00000461897 PKHD1L1Q86WI1 4243 aa7.2□□□□□ -1.26
COL4A6-204ENST00000461897 EPPK1P58107 5090 aaKnown RBP7.19□□□□□ -1.26
COL4A6-204ENST00000461897 SPINK6Q6UWN8 80 aa7.18□□□□□ -1.26
COL4A6-204ENST00000461897 Q5W150 140 aa7.17□□□□□ -1.26
COL4A6-204ENST00000461897 PMAIP1Q13794 54 aa7.17□□□□□ -1.26
COL4A6-204ENST00000461897 A8MU10 97 aa7.16□□□□□ -1.26
COL4A6-204ENST00000461897 LCA10Q71F78 164 aa7.15□□□□□ -1.27
COL4A6-204ENST00000461897 KIAA1109Q2LD37 5005 aa7.14□□□□□ -1.27
COL4A6-204ENST00000461897 PLA2G1BP04054 148 aaKnown RBP7.14□□□□□ -1.27
COL4A6-204ENST00000461897 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
COL4A6-204ENST00000461897 SPAG11AQ6PDA7 123 aa7.13□□□□□ -1.27
COL4A6-204ENST00000461897 A6NED7 52 aa7.12□□□□□ -1.27
COL4A6-204ENST00000461897 CDC42SE1Q9NRR8 79 aa7.12□□□□□ -1.27
COL4A6-204ENST00000461897 FAM229AH3BQW9 127 aa7.09□□□□□ -1.27
COL4A6-204ENST00000461897 ACYP2P14621 99 aa7.09□□□□□ -1.28
COL4A6-204ENST00000461897 LINC00313P59037 77 aa7.09□□□□□ -1.28
COL4A6-204ENST00000461897 PRR26Q8N8Z3 221 aa7.09□□□□□ -1.28
COL4A6-204ENST00000461897 DMAC1Q96GE9 116 aa7.09□□□□□ -1.28
COL4A6-204ENST00000461897 TYMSOSQ8TAI1 123 aa7.08□□□□□ -1.28
COL4A6-204ENST00000461897 KRTAP16-1A8MUX0 517 aa7.04□□□□□ -1.28
COL4A6-204ENST00000461897 IGKV2-30P06310 120 aa7.04□□□□□ -1.28
COL4A6-204ENST00000461897 A6NN06 94 aa7.04□□□□□ -1.28
COL4A6-204ENST00000461897 Q5VSD8 79 aa7.04□□□□□ -1.28
COL4A6-204ENST00000461897 LRP1Q07954 4544 aaKnown RBP7.03□□□□□ -1.28
COL4A6-204ENST00000461897 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
COL4A6-204ENST00000461897 SPINK7P58062 85 aa7.02□□□□□ -1.28
COL4A6-204ENST00000461897 TNXBP22105 4242 aa7.02□□□□□ -1.29
COL4A6-204ENST00000461897 SEC61GP60059 68 aa7.02□□□□□ -1.29
COL4A6-204ENST00000461897 LCE2DQ5TA82 110 aaPredicted RBP7.02□□□□□ -1.29
COL4A6-204ENST00000461897 KTN1-AS1Q86SY8 53 aa7.02□□□□□ -1.29
COL4A6-204ENST00000461897 SPTSSBQ8NFR3 76 aa7.01□□□□□ -1.29
COL4A6-204ENST00000461897 FAT3Q8TDW7 4589 aa7.01□□□□□ -1.29
COL4A6-204ENST00000461897 SPINK1P00995 79 aa7□□□□□ -1.29
COL4A6-204ENST00000461897 C4orf48Q5BLP8 95 aa7□□□□□ -1.29
COL4A6-204ENST00000461897 LINC00304Q8N9R0 145 aa7□□□□□ -1.29
COL4A6-204ENST00000461897 RPS29P62273 56 aaKnown RBP6.96□□□□□ -1.3
COL4A6-204ENST00000461897 MYCBP2O75592 4640 aa6.94□□□□□ -1.3
COL4A6-204ENST00000461897 Q8N1X5 172 aa6.92□□□□□ -1.3
COL4A6-204ENST00000461897 RETNLBQ9BQ08 111 aa6.91□□□□□ -1.3
COL4A6-204ENST00000461897 C7orf65Q6ZTY9 151 aa6.9□□□□□ -1.31
COL4A6-204ENST00000461897 IGKV2D-30A0A075B6S6 120 aa6.88□□□□□ -1.31
COL4A6-204ENST00000461897 KRTAP10-8P60410 259 aa6.88□□□□□ -1.31
COL4A6-204ENST00000461897 A0A1B0GU69 56 aa6.87□□□□□ -1.31
COL4A6-204ENST00000461897 SPATA8Q6RVD6 105 aa6.87□□□□□ -1.31
COL4A6-204ENST00000461897 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
COL4A6-204ENST00000461897 BIRC6Q9NR09 4857 aa6.86□□□□□ -1.31
COL4A6-204ENST00000461897 ABCA13Q86UQ4 5058 aa6.83□□□□□ -1.32
COL4A6-204ENST00000461897 RBM12B-AS1Q9P1G2 102 aa6.82□□□□□ -1.32
COL4A6-204ENST00000461897 HERC2O95714 4834 aa6.81□□□□□ -1.32
COL4A6-204ENST00000461897 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
COL4A6-204ENST00000461897 UQCR11O14957 56 aa6.79□□□□□ -1.32
COL4A6-204ENST00000461897 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms