RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 A0A1B0GW54 56 aa7.15□□□□□ -1.26
SCAMP4-206ENST00000460767 KRTAP16-1A8MUX0 517 aa7.15□□□□□ -1.26
SCAMP4-206ENST00000460767 C9JAW5 83 aa7.15□□□□□ -1.26
SCAMP4-206ENST00000460767 C21orf62-AS1Q17RA5 79 aa7.12□□□□□ -1.27
SCAMP4-206ENST00000460767 SSPOA2VEC9 5147 aa7.12□□□□□ -1.27
SCAMP4-206ENST00000460767 H3BT86 120 aa7.11□□□□□ -1.27
SCAMP4-206ENST00000460767 IGKV4-1P06312 121 aa7.11□□□□□ -1.27
SCAMP4-206ENST00000460767 PDE6GP18545 87 aa7.11□□□□□ -1.27
SCAMP4-206ENST00000460767 NOTCH2NLQ7Z3S9 236 aa7.11□□□□□ -1.27
SCAMP4-206ENST00000460767 DSCR10P59022 87 aa7.1□□□□□ -1.27
SCAMP4-206ENST00000460767 DEFB116Q30KQ4 102 aa7.09□□□□□ -1.27
SCAMP4-206ENST00000460767 SIGMAR1Q99720 223 aa7.09□□□□□ -1.27
SCAMP4-206ENST00000460767 C14orf132Q9NPU4 83 aa7.09□□□□□ -1.27
SCAMP4-206ENST00000460767 USH2AO75445 5202 aa7.09□□□□□ -1.28
SCAMP4-206ENST00000460767 VPS25Q9BRG1 176 aa7.08□□□□□ -1.28
SCAMP4-206ENST00000460767 LINC00313P59037 77 aa7.07□□□□□ -1.28
SCAMP4-206ENST00000460767 SMCPP49901 116 aaPredicted RBP7.06□□□□□ -1.28
SCAMP4-206ENST00000460767 COL5A1-AS1Q5SY13 56 aa7.06□□□□□ -1.28
SCAMP4-206ENST00000460767 ATP11AUNQ6ZP68 121 aa7.05□□□□□ -1.28
SCAMP4-206ENST00000460767 KRTAP9-8Q9BYQ0 159 aa7.05□□□□□ -1.28
SCAMP4-206ENST00000460767 FCGBPQ9Y6R7 5405 aaPredicted RBP7.04□□□□□ -1.28
SCAMP4-206ENST00000460767 A0A1B0GVX0 72 aa7.04□□□□□ -1.28
SCAMP4-206ENST00000460767 J3KT08 172 aa7.04□□□□□ -1.28
SCAMP4-206ENST00000460767 MTURNQ8N3F0 131 aa7.04□□□□□ -1.28
SCAMP4-206ENST00000460767 PRO0461Q9UI25 63 aa7.04□□□□□ -1.28
SCAMP4-206ENST00000460767 SPCS1Q9Y6A9 102 aa7.04□□□□□ -1.28
SCAMP4-206ENST00000460767 C8orf87E5RJ46 101 aa7.02□□□□□ -1.29
SCAMP4-206ENST00000460767 IGHV6-1A0A0B4J1U7 121 aa7.01□□□□□ -1.29
SCAMP4-206ENST00000460767 A8MWP4 228 aa6.99□□□□□ -1.29
SCAMP4-206ENST00000460767 K7EP34 96 aa6.99□□□□□ -1.29
SCAMP4-206ENST00000460767 IGKV3D-7A0A0C4DH55 119 aa6.98□□□□□ -1.29
SCAMP4-206ENST00000460767 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
SCAMP4-206ENST00000460767 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
SCAMP4-206ENST00000460767 PRR15Q8IV56 129 aa6.94□□□□□ -1.3
SCAMP4-206ENST00000460767 MPLKIPQ8TAP9 179 aa6.94□□□□□ -1.3
SCAMP4-206ENST00000460767 NREPQ16612 68 aa6.93□□□□□ -1.3
SCAMP4-206ENST00000460767 C8orf17Q9NRJ1 99 aa6.93□□□□□ -1.3
SCAMP4-206ENST00000460767 MACF1Q9UPN3 7388 aaKnown RBP6.92□□□□□ -1.3
SCAMP4-206ENST00000460767 NDUFB1O75438 58 aa6.92□□□□□ -1.3
SCAMP4-206ENST00000460767 SYNE2Q8WXH0 6885 aaKnown RBP6.92□□□□□ -1.3
SCAMP4-206ENST00000460767 PCP4L1A6NKN8 68 aa6.91□□□□□ -1.3
SCAMP4-206ENST00000460767 LCE2BO14633 110 aa6.9□□□□□ -1.3
SCAMP4-206ENST00000460767 MMP24-AS1A0A0U1RRL7 71 aa6.89□□□□□ -1.31
SCAMP4-206ENST00000460767 HRES1P13985 223 aa6.89□□□□□ -1.31
SCAMP4-206ENST00000460767 MT2AP02795 61 aa6.88□□□□□ -1.31
SCAMP4-206ENST00000460767 Q6ZVQ6 151 aa6.88□□□□□ -1.31
SCAMP4-206ENST00000460767 ZCCHC13Q8WW36 166 aaKnown RBP6.88□□□□□ -1.31
SCAMP4-206ENST00000460767 K7EQZ3 153 aa6.87□□□□□ -1.31
SCAMP4-206ENST00000460767 F8W1H4 67 aa6.86□□□□□ -1.31
SCAMP4-206ENST00000460767 GTF2H5Q6ZYL4 71 aa6.86□□□□□ -1.31
SCAMP4-206ENST00000460767 TMEM254Q8TBM7 123 aa6.85□□□□□ -1.31
SCAMP4-206ENST00000460767 KRTAP9-3Q9BYQ3 159 aa6.85□□□□□ -1.31
SCAMP4-206ENST00000460767 LINC00846Q9NV44 126 aa6.84□□□□□ -1.31
SCAMP4-206ENST00000460767 MT1FP04733 61 aa6.83□□□□□ -1.32
SCAMP4-206ENST00000460767 BPY2O14599 106 aa6.82□□□□□ -1.32
SCAMP4-206ENST00000460767 MRPL34Q9BQ48 92 aaKnown RBP6.82□□□□□ -1.32
SCAMP4-206ENST00000460767 KRTAP19-6Q3LI70 58 aa6.8□□□□□ -1.32
SCAMP4-206ENST00000460767 ETDBQ3ZM63 59 aa6.8□□□□□ -1.32
SCAMP4-206ENST00000460767 hDV103S1A0JD37 113 aa6.79□□□□□ -1.32
SCAMP4-206ENST00000460767 SPINK7P58062 85 aa6.78□□□□□ -1.32
SCAMP4-206ENST00000460767 KRTAP6-3Q3LI67 103 aa6.78□□□□□ -1.32
SCAMP4-206ENST00000460767 Q8N9L7 120 aa6.77□□□□□ -1.33
SCAMP4-206ENST00000460767 UBL5Q9BZL1 73 aa6.75□□□□□ -1.33
SCAMP4-206ENST00000460767 Q5W150 140 aa6.73□□□□□ -1.33
SCAMP4-206ENST00000460767 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
SCAMP4-206ENST00000460767 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
SCAMP4-206ENST00000460767 CXCL6P80162 114 aa6.7□□□□□ -1.34
SCAMP4-206ENST00000460767 CASC2Q6XLA1 102 aa6.7□□□□□ -1.34
SCAMP4-206ENST00000460767 WFDC13Q8IUB5 93 aa6.69□□□□□ -1.34
SCAMP4-206ENST00000460767 FAM240AA0A1B0GVK7 77 aa6.68□□□□□ -1.34
SCAMP4-206ENST00000460767 HCG22E2RYF7 251 aa6.67□□□□□ -1.34
SCAMP4-206ENST00000460767 FAM236DA0A1B0GTK5 79 aa6.65□□□□□ -1.34
SCAMP4-206ENST00000460767 FAM236CP0DP71 79 aa6.65□□□□□ -1.34
SCAMP4-206ENST00000460767 NDUFS5O43920 106 aa6.64□□□□□ -1.35
SCAMP4-206ENST00000460767 ACYP1P07311 99 aa6.64□□□□□ -1.35
SCAMP4-206ENST00000460767 A0A1B0GV90 55 aa6.61□□□□□ -1.35
SCAMP4-206ENST00000460767 C7orf65Q6ZTY9 151 aa6.59□□□□□ -1.35
SCAMP4-206ENST00000460767 NEBP20929 6669 aa6.58□□□□□ -1.36
SCAMP4-206ENST00000460767 IGKV2D-30A0A075B6S6 120 aa6.56□□□□□ -1.36
SCAMP4-206ENST00000460767 IGKV2-30P06310 120 aa6.56□□□□□ -1.36
SCAMP4-206ENST00000460767 ATP5EP2Q5VTU8 51 aa6.55□□□□□ -1.36
SCAMP4-206ENST00000460767 TP53AIP1Q9HCN2 124 aa6.55□□□□□ -1.36
SCAMP4-206ENST00000460767 H1FX-AS1Q4G0G2 97 aa6.53□□□□□ -1.36
SCAMP4-206ENST00000460767 KRTAP3-1Q9BYR8 98 aa6.5□□□□□ -1.37
SCAMP4-206ENST00000460767 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
SCAMP4-206ENST00000460767 C4orf26Q17RF5 130 aa6.47□□□□□ -1.37
SCAMP4-206ENST00000460767 KRTAP20-1Q3LI63 56 aa6.47□□□□□ -1.37
SCAMP4-206ENST00000460767 CYP4F30PQ9H0H9 118 aa6.43□□□□□ -1.38
SCAMP4-206ENST00000460767 A0A087WVE0 104 aa6.41□□□□□ -1.38
SCAMP4-206ENST00000460767 TRAV22A0A0B4J277 110 aa6.41□□□□□ -1.38
SCAMP4-206ENST00000460767 HIST1H4AP62805 103 aaKnown RBP6.4□□□□□ -1.38
SCAMP4-206ENST00000460767 MUC12Q9UKN1 5478 aa6.38□□□□□ -1.39
SCAMP4-206ENST00000460767 UQCRQO14949 82 aa6.38□□□□□ -1.39
SCAMP4-206ENST00000460767 LOC101927531A0A1B0GV80 90 aa6.37□□□□□ -1.39
SCAMP4-206ENST00000460767 C1orf64Q8NEQ6 169 aa6.37□□□□□ -1.39
SCAMP4-206ENST00000460767 OCR1Q9BZK8 76 aa6.36□□□□□ -1.39
SCAMP4-206ENST00000460767 J3QR89 54 aa6.35□□□□□ -1.39
SCAMP4-206ENST00000460767 ATOX1O00244 68 aa6.32□□□□□ -1.4
SCAMP4-206ENST00000460767 KRTAP3-3Q9BYR6 98 aa6.32□□□□□ -1.4
SCAMP4-206ENST00000460767 H0Y9P7 68 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms