RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 SPINK6Q6UWN8 80 aa12.03□□□□□ -0.48
TMED4-203ENST00000457408 NDUFB1O75438 58 aa12.03□□□□□ -0.48
TMED4-203ENST00000457408 SSBP3-AS1Q7Z2R9 100 aa12.03□□□□□ -0.48
TMED4-203ENST00000457408 CASC2Q6XLA1 102 aa12.01□□□□□ -0.49
TMED4-203ENST00000457408 KRTAP1-4P0C5Y4 121 aa12□□□□□ -0.49
TMED4-203ENST00000457408 Q1T7F1 81 aa12□□□□□ -0.49
TMED4-203ENST00000457408 KRTAP29-1A8MX34 341 aaPredicted RBP11.99□□□□□ -0.49
TMED4-203ENST00000457408 PLA2G1BP04054 148 aaKnown RBP11.99□□□□□ -0.49
TMED4-203ENST00000457408 C1orf64Q8NEQ6 169 aa11.99□□□□□ -0.49
TMED4-203ENST00000457408 IGHV6-1A0A0B4J1U7 121 aa11.98□□□□□ -0.49
TMED4-203ENST00000457408 CYP4F30PQ9H0H9 118 aa11.98□□□□□ -0.49
TMED4-203ENST00000457408 CDK2AP2O75956 126 aa11.97□□□□□ -0.49
TMED4-203ENST00000457408 MP68P56378 58 aa11.97□□□□□ -0.49
TMED4-203ENST00000457408 MMP24-AS1A0A0U1RRL7 71 aa11.93□□□□□ -0.5
TMED4-203ENST00000457408 CD164Q04900 197 aa11.93□□□□□ -0.5
TMED4-203ENST00000457408 TRAV22A0A0B4J277 110 aa11.92□□□□□ -0.5
TMED4-203ENST00000457408 APOBP04114 4563 aaKnown RBP11.91□□□□□ -0.5
TMED4-203ENST00000457408 FAT1Q14517 4588 aa11.91□□□□□ -0.5
TMED4-203ENST00000457408 A0A1B0GVX0 72 aa11.9□□□□□ -0.5
TMED4-203ENST00000457408 PMAIP1Q13794 54 aa11.9□□□□□ -0.5
TMED4-203ENST00000457408 LINC00208Q96KT6 92 aa11.89□□□□□ -0.51
TMED4-203ENST00000457408 H3BPC8 53 aa11.89□□□□□ -0.51
TMED4-203ENST00000457408 TYMSOSQ8TAI1 123 aa11.88□□□□□ -0.51
TMED4-203ENST00000457408 C8orf17Q9NRJ1 99 aa11.88□□□□□ -0.51
TMED4-203ENST00000457408 PRR4Q16378 134 aa11.88□□□□□ -0.51
TMED4-203ENST00000457408 NOTCH2NLQ7Z3S9 236 aa11.87□□□□□ -0.51
TMED4-203ENST00000457408 H0Y9P7 68 aa11.87□□□□□ -0.51
TMED4-203ENST00000457408 RYR3Q15413 4870 aa11.86□□□□□ -0.51
TMED4-203ENST00000457408 PRR26Q8N8Z3 221 aa11.86□□□□□ -0.51
TMED4-203ENST00000457408 PSPHP1O15172 72 aa11.85□□□□□ -0.51
TMED4-203ENST00000457408 C4orf48Q5BLP8 95 aa11.83□□□□□ -0.52
TMED4-203ENST00000457408 SPANXA2-OT1Q8N9U9 137 aa11.82□□□□□ -0.52
TMED4-203ENST00000457408 NDUFS5O43920 106 aa11.82□□□□□ -0.52
TMED4-203ENST00000457408 KRTAP10-4P60372 401 aaPredicted RBP11.77□□□□□ -0.53
TMED4-203ENST00000457408 ASB16-AS1Q495Z4 193 aa11.76□□□□□ -0.53
TMED4-203ENST00000457408 A8MUN3 132 aa11.74□□□□□ -0.53
TMED4-203ENST00000457408 LIMD2Q9BT23 127 aa11.74□□□□□ -0.53
TMED4-203ENST00000457408 MRPL34Q9BQ48 92 aaKnown RBP11.74□□□□□ -0.53
TMED4-203ENST00000457408 LINC00304Q8N9R0 145 aa11.71□□□□□ -0.54
TMED4-203ENST00000457408 SPINK1P00995 79 aa11.7□□□□□ -0.54
TMED4-203ENST00000457408 Q5VV11 94 aa11.69□□□□□ -0.54
TMED4-203ENST00000457408 TP53AIP1Q9HCN2 124 aa11.67□□□□□ -0.54
TMED4-203ENST00000457408 A8MU10 97 aa11.66□□□□□ -0.54
TMED4-203ENST00000457408 LINC00313P59037 77 aa11.66□□□□□ -0.54
TMED4-203ENST00000457408 FAM229AH3BQW9 127 aa11.64□□□□□ -0.55
TMED4-203ENST00000457408 IGLV7-46A0A075B6I9 117 aa11.63□□□□□ -0.55
TMED4-203ENST00000457408 C8orf87E5RJ46 101 aa11.61□□□□□ -0.55
TMED4-203ENST00000457408 Q8N9P0 234 aaPredicted RBP11.61□□□□□ -0.55
TMED4-203ENST00000457408 Q5VSD8 79 aa11.58□□□□□ -0.56
TMED4-203ENST00000457408 CHKB-CPT1BH3BT56 60 aa11.57□□□□□ -0.56
TMED4-203ENST00000457408 SPAG11AQ6PDA7 123 aa11.57□□□□□ -0.56
TMED4-203ENST00000457408 HSPG2P98160 4391 aa11.56□□□□□ -0.56
TMED4-203ENST00000457408 RETNLBQ9BQ08 111 aa11.56□□□□□ -0.56
TMED4-203ENST00000457408 COA5Q86WW8 74 aa11.55□□□□□ -0.56
TMED4-203ENST00000457408 Q5W150 140 aa11.55□□□□□ -0.56
TMED4-203ENST00000457408 PCOTHQ58A44 107 aa11.54□□□□□ -0.56
TMED4-203ENST00000457408 PRR15LQ9BU68 103 aa11.52□□□□□ -0.57
TMED4-203ENST00000457408 KTN1-AS1Q86SY8 53 aa11.49□□□□□ -0.57
TMED4-203ENST00000457408 LRP1Q07954 4544 aaKnown RBP11.49□□□□□ -0.57
TMED4-203ENST00000457408 RYR1P21817 5038 aa11.49□□□□□ -0.57
TMED4-203ENST00000457408 RPS29P62273 56 aaKnown RBP11.49□□□□□ -0.57
TMED4-203ENST00000457408 PKHD1L1Q86WI1 4243 aa11.47□□□□□ -0.57
TMED4-203ENST00000457408 KIAA1109Q2LD37 5005 aa11.47□□□□□ -0.57
TMED4-203ENST00000457408 KRTAP16-1A8MUX0 517 aa11.47□□□□□ -0.57
TMED4-203ENST00000457408 LCA10Q71F78 164 aa11.47□□□□□ -0.57
TMED4-203ENST00000457408 Q75L30 129 aa11.47□□□□□ -0.57
TMED4-203ENST00000457408 KRTAP17-1Q9BYP8 105 aa11.47□□□□□ -0.57
TMED4-203ENST00000457408 EPPK1P58107 5090 aaKnown RBP11.45□□□□□ -0.58
TMED4-203ENST00000457408 ATP11AUNQ6ZP68 121 aa11.45□□□□□ -0.58
TMED4-203ENST00000457408 LOC101927531A0A1B0GV80 90 aa11.44□□□□□ -0.58
TMED4-203ENST00000457408 SPTSSBQ8NFR3 76 aa11.44□□□□□ -0.58
TMED4-203ENST00000457408 FLG2Q5D862 2391 aaPredicted RBP11.43□□□□□ -0.58
TMED4-203ENST00000457408 C9orf92A6NGG3 77 aa11.41□□□□□ -0.58
TMED4-203ENST00000457408 KRTAP13-3Q3SY46 172 aa11.41□□□□□ -0.58
TMED4-203ENST00000457408 Q8N1X5 172 aa11.4□□□□□ -0.58
TMED4-203ENST00000457408 A6NED7 52 aa11.4□□□□□ -0.59
TMED4-203ENST00000457408 RBM12B-AS1Q9P1G2 102 aa11.39□□□□□ -0.59
TMED4-203ENST00000457408 A6NN06 94 aa11.37□□□□□ -0.59
TMED4-203ENST00000457408 HRES1P13985 223 aa11.35□□□□□ -0.59
TMED4-203ENST00000457408 LINC01558Q9Y6Z2 57 aa11.35□□□□□ -0.59
TMED4-203ENST00000457408 CDC42SE1Q9NRR8 79 aa11.34□□□□□ -0.59
TMED4-203ENST00000457408 TNXBP22105 4242 aa11.33□□□□□ -0.6
TMED4-203ENST00000457408 KRTAP10-8P60410 259 aa11.31□□□□□ -0.6
TMED4-203ENST00000457408 DMBT1Q9UGM3 2413 aaPredicted RBP11.3□□□□□ -0.6
TMED4-203ENST00000457408 MYCBP2O75592 4640 aa11.3□□□□□ -0.6
TMED4-203ENST00000457408 IGKV2D-30A0A075B6S6 120 aa11.27□□□□□ -0.61
TMED4-203ENST00000457408 IGKV2-30P06310 120 aa11.27□□□□□ -0.61
TMED4-203ENST00000457408 FAT3Q8TDW7 4589 aa11.23□□□□□ -0.61
TMED4-203ENST00000457408 C7orf65Q6ZTY9 151 aa11.21□□□□□ -0.62
TMED4-203ENST00000457408 ACYP2P14621 99 aa11.16□□□□□ -0.62
TMED4-203ENST00000457408 SPINK7P58062 85 aa11.16□□□□□ -0.62
TMED4-203ENST00000457408 C20orf166-AS1Q96NR2 134 aa11.12□□□□□ -0.63
TMED4-203ENST00000457408 A8MUU9 505 aa11.12□□□□□ -0.63
TMED4-203ENST00000457408 MT1HL1P0DM35 61 aa11.12□□□□□ -0.63
TMED4-203ENST00000457408 DMAC1Q96GE9 116 aa11.12□□□□□ -0.63
TMED4-203ENST00000457408 KRTAP4-5Q9BYR2 181 aa11.09□□□□□ -0.63
TMED4-203ENST00000457408 XP32Q5T750 250 aa10.9□□□□□ -0.67
TMED4-203ENST00000457408 A0A1B0GU69 56 aa10.88□□□□□ -0.67
TMED4-203ENST00000457408 ABCA13Q86UQ4 5058 aa10.88□□□□□ -0.67
TMED4-203ENST00000457408 PRAC1Q96KF2 57 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms