RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 SETXQ7Z333 2677 aaKnown RBP1.88□□□□□ -2.11
HMGB3P8-201ENST00000449709 CREBBPQ92793 2442 aa1.87□□□□□ -2.11
HMGB3P8-201ENST00000449709 SPG11Q96JI7 2443 aa1.87□□□□□ -2.11
HMGB3P8-201ENST00000449709 DNAH8Q96JB1 4490 aa1.87□□□□□ -2.11
HMGB3P8-201ENST00000449709 SVEP1Q4LDE5 3571 aa1.87□□□□□ -2.11
HMGB3P8-201ENST00000449709 GVINP1Q7Z2Y8 2422 aa1.86□□□□□ -2.11
HMGB3P8-201ENST00000449709 SPART-AS1P0CW21 52 aa1.86□□□□□ -2.11
HMGB3P8-201ENST00000449709 NF1P21359 2839 aa1.86□□□□□ -2.11
HMGB3P8-201ENST00000449709 FLG2Q5D862 2391 aaPredicted RBP1.85□□□□□ -2.11
HMGB3P8-201ENST00000449709 A0A096LNI7 61 aa1.85□□□□□ -2.11
HMGB3P8-201ENST00000449709 LCE3CQ5T5A8 94 aa1.85□□□□□ -2.11
HMGB3P8-201ENST00000449709 C10orf95Q9H7T3 257 aa1.85□□□□□ -2.11
HMGB3P8-201ENST00000449709 KRTAP4-3Q9BYR4 195 aa1.84□□□□□ -2.11
HMGB3P8-201ENST00000449709 PTPN13Q12923 2485 aa1.84□□□□□ -2.12
HMGB3P8-201ENST00000449709 VPS13CQ709C8 3753 aa1.84□□□□□ -2.12
HMGB3P8-201ENST00000449709 Q6ZRN7 208 aaPredicted RBP1.83□□□□□ -2.12
HMGB3P8-201ENST00000449709 PLAC4Q8WY50 150 aa1.83□□□□□ -2.12
HMGB3P8-201ENST00000449709 EYSQ5T1H1 3165 aa1.83□□□□□ -2.12
HMGB3P8-201ENST00000449709 DNAH17Q9UFH2 4485 aa1.83□□□□□ -2.12
HMGB3P8-201ENST00000449709 TRRAPQ9Y4A5 3859 aa1.83□□□□□ -2.12
HMGB3P8-201ENST00000449709 FN1P02751 2386 aaKnown RBP1.83□□□□□ -2.12
HMGB3P8-201ENST00000449709 UBR5O95071 2799 aaPredicted RBP1.82□□□□□ -2.12
HMGB3P8-201ENST00000449709 CEP290O15078 2479 aa1.82□□□□□ -2.12
HMGB3P8-201ENST00000449709 TLN1Q9Y490 2541 aaKnown RBP1.82□□□□□ -2.12
HMGB3P8-201ENST00000449709 FBN1P35555 2871 aaKnown RBP1.82□□□□□ -2.12
HMGB3P8-201ENST00000449709 SPRR5A0A1B0GTR4 108 aa1.82□□□□□ -2.12
HMGB3P8-201ENST00000449709 A0A1B0GVY2 172 aa1.82□□□□□ -2.12
HMGB3P8-201ENST00000449709 KRTAP13-4Q3LI77 160 aa1.82□□□□□ -2.12
HMGB3P8-201ENST00000449709 DEFB123Q8N688 67 aa1.82□□□□□ -2.12
HMGB3P8-201ENST00000449709 TLN2Q9Y4G6 2542 aa1.82□□□□□ -2.12
HMGB3P8-201ENST00000449709 VWFP04275 2813 aa1.81□□□□□ -2.12
HMGB3P8-201ENST00000449709 HIVEP3Q5T1R4 2406 aa1.81□□□□□ -2.12
HMGB3P8-201ENST00000449709 RIF1Q5UIP0 2472 aaKnown RBP1.81□□□□□ -2.12
HMGB3P8-201ENST00000449709 DEFB135Q30KP9 77 aa1.81□□□□□ -2.12
HMGB3P8-201ENST00000449709 CSPG4Q6UVK1 2322 aa1.81□□□□□ -2.12
HMGB3P8-201ENST00000449709 ATRXP46100 2492 aa1.81□□□□□ -2.12
HMGB3P8-201ENST00000449709 TEX15Q9BXT5 2789 aa1.81□□□□□ -2.12
HMGB3P8-201ENST00000449709 CRYBG3Q68DQ2 2970 aa1.8□□□□□ -2.12
HMGB3P8-201ENST00000449709 MUC3AQ02505 3323 aa1.8□□□□□ -2.12
HMGB3P8-201ENST00000449709 S4R3F8 94 aa1.8□□□□□ -2.12
HMGB3P8-201ENST00000449709 FRAS1Q86XX4 4008 aa1.8□□□□□ -2.12
HMGB3P8-201ENST00000449709 DYNC2H1Q8NCM8 4307 aaKnown RBP1.8□□□□□ -2.12
HMGB3P8-201ENST00000449709 ZNF462Q96JM2 2506 aa1.8□□□□□ -2.12
HMGB3P8-201ENST00000449709 CSMD3Q7Z407 3707 aa1.8□□□□□ -2.12
HMGB3P8-201ENST00000449709 UTP20O75691 2785 aaKnown RBP1.8□□□□□ -2.12
HMGB3P8-201ENST00000449709 MEGF8Q7Z7M0 2845 aa1.8□□□□□ -2.12
HMGB3P8-201ENST00000449709 JMJD1CQ15652 2540 aa1.79□□□□□ -2.12
HMGB3P8-201ENST00000449709 DNAH11Q96DT5 4516 aa1.79□□□□□ -2.12
HMGB3P8-201ENST00000449709 INE1O15225 51 aa1.79□□□□□ -2.12
HMGB3P8-201ENST00000449709 KRTAP10-3P60369 221 aa1.79□□□□□ -2.12
HMGB3P8-201ENST00000449709 SPACA4Q8TDM5 124 aa1.79□□□□□ -2.12
HMGB3P8-201ENST00000449709 ANK2Q01484 3957 aa1.79□□□□□ -2.12
HMGB3P8-201ENST00000449709 CUBNO60494 3623 aa1.78□□□□□ -2.12
HMGB3P8-201ENST00000449709 CSMD2Q7Z408 3487 aa1.78□□□□□ -2.12
HMGB3P8-201ENST00000449709 ZFHX2Q9C0A1 2572 aaPredicted RBP1.78□□□□□ -2.12
HMGB3P8-201ENST00000449709 F8P00451 2351 aa1.78□□□□□ -2.12
HMGB3P8-201ENST00000449709 DEFB4AO15263 64 aa1.78□□□□□ -2.12
HMGB3P8-201ENST00000449709 SPINK1P00995 79 aa1.78□□□□□ -2.12
HMGB3P8-201ENST00000449709 MYCBP2O75592 4640 aa1.78□□□□□ -2.12
HMGB3P8-201ENST00000449709 DNAH10Q8IVF4 4471 aa1.78□□□□□ -2.12
HMGB3P8-201ENST00000449709 ANKRD11Q6UB99 2663 aaPredicted RBP1.78□□□□□ -2.12
HMGB3P8-201ENST00000449709 MUC6Q6W4X9 2439 aa1.78□□□□□ -2.12
HMGB3P8-201ENST00000449709 DNAH9Q9NYC9 4486 aa1.77□□□□□ -2.13
HMGB3P8-201ENST00000449709 KRTAP12-1P59990 96 aa1.77□□□□□ -2.13
HMGB3P8-201ENST00000449709 KRTAP12-2P59991 146 aa1.77□□□□□ -2.13
HMGB3P8-201ENST00000449709 ZFYVE26Q68DK2 2539 aa1.76□□□□□ -2.13
HMGB3P8-201ENST00000449709 HIVEP2P31629 2446 aa1.76□□□□□ -2.13
HMGB3P8-201ENST00000449709 OTOGLQ3ZCN5 2332 aa1.76□□□□□ -2.13
HMGB3P8-201ENST00000449709 HTN3P15516 51 aa1.76□□□□□ -2.13
HMGB3P8-201ENST00000449709 SRRM2Q9UQ35 2752 aaKnown RBP1.76□□□□□ -2.13
HMGB3P8-201ENST00000449709 NAV2Q8IVL1 2488 aa1.76□□□□□ -2.13
HMGB3P8-201ENST00000449709 MXRA5Q9NR99 2828 aa1.76□□□□□ -2.13
HMGB3P8-201ENST00000449709 DNAH2Q9P225 4427 aa1.75□□□□□ -2.13
HMGB3P8-201ENST00000449709 CEP295Q9C0D2 2601 aa1.75□□□□□ -2.13
HMGB3P8-201ENST00000449709 PRKDCP78527 4128 aaKnown RBP1.75□□□□□ -2.13
HMGB3P8-201ENST00000449709 TENM4Q6N022 2769 aa1.75□□□□□ -2.13
HMGB3P8-201ENST00000449709 SPINK6Q6UWN8 80 aa1.75□□□□□ -2.13
HMGB3P8-201ENST00000449709 GCN1Q92616 2671 aaKnown RBP1.74□□□□□ -2.13
HMGB3P8-201ENST00000449709 USP9XQ93008 2570 aaPredicted RBP1.74□□□□□ -2.13
HMGB3P8-201ENST00000449709 DNAH6Q9C0G6 4158 aa1.74□□□□□ -2.13
HMGB3P8-201ENST00000449709 LYSTQ99698 3801 aa1.73□□□□□ -2.13
HMGB3P8-201ENST00000449709 CCDC168Q8NDH2 2452 aa1.73□□□□□ -2.13
HMGB3P8-201ENST00000449709 KRTAP10-8P60410 259 aa1.73□□□□□ -2.13
HMGB3P8-201ENST00000449709 HIVEP1P15822 2718 aa1.73□□□□□ -2.13
HMGB3P8-201ENST00000449709 NIPBLQ6KC79 2804 aaeCLIP1.72□□□□□ -2.13
HMGB3P8-201ENST00000449709 NBEAL2Q6ZNJ1 2754 aa1.72□□□□□ -2.13
HMGB3P8-201ENST00000449709 PP632Q6XCG6 107 aa1.72□□□□□ -2.13
HMGB3P8-201ENST00000449709 UNC79Q9P2D8 2635 aa1.71□□□□□ -2.13
HMGB3P8-201ENST00000449709 MYO9AB2RTY4 2548 aa1.71□□□□□ -2.14
HMGB3P8-201ENST00000449709 SACSQ9NZJ4 4579 aa1.71□□□□□ -2.14
HMGB3P8-201ENST00000449709 DNAH7Q8WXX0 4024 aa1.71□□□□□ -2.14
HMGB3P8-201ENST00000449709 DOPEY1Q5JWR5 2465 aa1.71□□□□□ -2.14
HMGB3P8-201ENST00000449709 R4GN34 69 aa1.71□□□□□ -2.14
HMGB3P8-201ENST00000449709 DNAH3Q8TD57 4116 aa1.7□□□□□ -2.14
HMGB3P8-201ENST00000449709 HUWE1Q7Z6Z7 4374 aaKnown RBP1.7□□□□□ -2.14
HMGB3P8-201ENST00000449709 MTORP42345 2549 aa1.7□□□□□ -2.14
HMGB3P8-201ENST00000449709 RPS29P62273 56 aaKnown RBP1.7□□□□□ -2.14
HMGB3P8-201ENST00000449709 PIEZO1Q92508 2521 aa1.7□□□□□ -2.14
HMGB3P8-201ENST00000449709 HECTD1Q9ULT8 2610 aa1.7□□□□□ -2.14
HMGB3P8-201ENST00000449709 CFAP46Q8IYW2 2715 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms