RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 ZCCHC13Q8WW36 166 aaKnown RBP9.43□□□□□ -0.9
AP000253.1-201ENST00000449339 C1orf195Q5TG92 126 aa9.42□□□□□ -0.9
AP000253.1-201ENST00000449339 A0A1B0GVX0 72 aa9.41□□□□□ -0.9
AP000253.1-201ENST00000449339 CDK2AP2O75956 126 aa9.41□□□□□ -0.9
AP000253.1-201ENST00000449339 KRTAP1-4P0C5Y4 121 aa9.41□□□□□ -0.9
AP000253.1-201ENST00000449339 V9GYY9 64 aa9.41□□□□□ -0.9
AP000253.1-201ENST00000449339 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
AP000253.1-201ENST00000449339 BRK1Q8WUW1 75 aa9.41□□□□□ -0.9
AP000253.1-201ENST00000449339 MP68P56378 58 aa9.4□□□□□ -0.9
AP000253.1-201ENST00000449339 C8orf17Q9NRJ1 99 aa9.4□□□□□ -0.9
AP000253.1-201ENST00000449339 RYR3Q15413 4870 aa9.4□□□□□ -0.9
AP000253.1-201ENST00000449339 ASB16-AS1Q495Z4 193 aa9.39□□□□□ -0.91
AP000253.1-201ENST00000449339 FAM229BQ4G0N7 80 aa9.39□□□□□ -0.91
AP000253.1-201ENST00000449339 FAT1Q14517 4588 aa9.38□□□□□ -0.91
AP000253.1-201ENST00000449339 SEC61GP60059 68 aa9.37□□□□□ -0.91
AP000253.1-201ENST00000449339 SPINK6Q6UWN8 80 aa9.37□□□□□ -0.91
AP000253.1-201ENST00000449339 H0Y9P7 68 aa9.36□□□□□ -0.91
AP000253.1-201ENST00000449339 LINC00208Q96KT6 92 aa9.35□□□□□ -0.91
AP000253.1-201ENST00000449339 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
AP000253.1-201ENST00000449339 NOTCH2NLQ7Z3S9 236 aa9.33□□□□□ -0.92
AP000253.1-201ENST00000449339 TRAV22A0A0B4J277 110 aa9.31□□□□□ -0.92
AP000253.1-201ENST00000449339 H3BPC8 53 aa9.31□□□□□ -0.92
AP000253.1-201ENST00000449339 TP53AIP1Q9HCN2 124 aa9.31□□□□□ -0.92
AP000253.1-201ENST00000449339 KRTAP10-4P60372 401 aaPredicted RBP9.3□□□□□ -0.92
AP000253.1-201ENST00000449339 MRPL34Q9BQ48 92 aaKnown RBP9.3□□□□□ -0.92
AP000253.1-201ENST00000449339 MPLKIPQ8TAP9 179 aa9.29□□□□□ -0.92
AP000253.1-201ENST00000449339 NDUFS5O43920 106 aa9.28□□□□□ -0.92
AP000253.1-201ENST00000449339 C1orf64Q8NEQ6 169 aa9.27□□□□□ -0.93
AP000253.1-201ENST00000449339 PRR26Q8N8Z3 221 aa9.25□□□□□ -0.93
AP000253.1-201ENST00000449339 TYMSOSQ8TAI1 123 aa9.25□□□□□ -0.93
AP000253.1-201ENST00000449339 Q1T7F1 81 aa9.23□□□□□ -0.93
AP000253.1-201ENST00000449339 LIMD2Q9BT23 127 aa9.22□□□□□ -0.93
AP000253.1-201ENST00000449339 C8orf87E5RJ46 101 aa9.21□□□□□ -0.94
AP000253.1-201ENST00000449339 PRR4Q16378 134 aa9.21□□□□□ -0.94
AP000253.1-201ENST00000449339 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
AP000253.1-201ENST00000449339 PMAIP1Q13794 54 aa9.19□□□□□ -0.94
AP000253.1-201ENST00000449339 CYP4F30PQ9H0H9 118 aa9.19□□□□□ -0.94
AP000253.1-201ENST00000449339 LINC00313P59037 77 aa9.18□□□□□ -0.94
AP000253.1-201ENST00000449339 SPINK1P00995 79 aa9.17□□□□□ -0.94
AP000253.1-201ENST00000449339 SPANXA2-OT1Q8N9U9 137 aa9.17□□□□□ -0.94
AP000253.1-201ENST00000449339 HSPG2P98160 4391 aa9.15□□□□□ -0.94
AP000253.1-201ENST00000449339 LINC00304Q8N9R0 145 aa9.13□□□□□ -0.95
AP000253.1-201ENST00000449339 RYR1P21817 5038 aa9.12□□□□□ -0.95
AP000253.1-201ENST00000449339 PCOTHQ58A44 107 aa9.12□□□□□ -0.95
AP000253.1-201ENST00000449339 Q5W150 140 aa9.12□□□□□ -0.95
AP000253.1-201ENST00000449339 FAM229AH3BQW9 127 aa9.11□□□□□ -0.95
AP000253.1-201ENST00000449339 KRTAP17-1Q9BYP8 105 aa9.1□□□□□ -0.95
AP000253.1-201ENST00000449339 PKHD1L1Q86WI1 4243 aa9.1□□□□□ -0.95
AP000253.1-201ENST00000449339 KRTAP13-3Q3SY46 172 aa9.09□□□□□ -0.95
AP000253.1-201ENST00000449339 Q5VSD8 79 aa9.09□□□□□ -0.95
AP000253.1-201ENST00000449339 Q8N9P0 234 aaPredicted RBP9.09□□□□□ -0.95
AP000253.1-201ENST00000449339 IGLV7-46A0A075B6I9 117 aa9.08□□□□□ -0.96
AP000253.1-201ENST00000449339 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
AP000253.1-201ENST00000449339 SPAG11AQ6PDA7 123 aa9.07□□□□□ -0.96
AP000253.1-201ENST00000449339 LOC101927531A0A1B0GV80 90 aa9.07□□□□□ -0.96
AP000253.1-201ENST00000449339 EPPK1P58107 5090 aaKnown RBP9.06□□□□□ -0.96
AP000253.1-201ENST00000449339 KRTAP16-1A8MUX0 517 aa9.06□□□□□ -0.96
AP000253.1-201ENST00000449339 KIAA1109Q2LD37 5005 aa9.06□□□□□ -0.96
AP000253.1-201ENST00000449339 LRP1Q07954 4544 aaKnown RBP9.04□□□□□ -0.96
AP000253.1-201ENST00000449339 PSPHP1O15172 72 aa9□□□□□ -0.97
AP000253.1-201ENST00000449339 RETNLBQ9BQ08 111 aa8.99□□□□□ -0.97
AP000253.1-201ENST00000449339 FLG2Q5D862 2391 aaPredicted RBP8.96□□□□□ -0.97
AP000253.1-201ENST00000449339 COA5Q86WW8 74 aa8.95□□□□□ -0.98
AP000253.1-201ENST00000449339 Q5VV11 94 aa8.94□□□□□ -0.98
AP000253.1-201ENST00000449339 Q8N1X5 172 aa8.94□□□□□ -0.98
AP000253.1-201ENST00000449339 TNXBP22105 4242 aa8.94□□□□□ -0.98
AP000253.1-201ENST00000449339 A8MUN3 132 aa8.93□□□□□ -0.98
AP000253.1-201ENST00000449339 IGKV2-30P06310 120 aa8.91□□□□□ -0.98
AP000253.1-201ENST00000449339 KRTAP10-8P60410 259 aa8.91□□□□□ -0.98
AP000253.1-201ENST00000449339 FAT3Q8TDW7 4589 aa8.91□□□□□ -0.98
AP000253.1-201ENST00000449339 HRES1P13985 223 aa8.88□□□□□ -0.99
AP000253.1-201ENST00000449339 KTN1-AS1Q86SY8 53 aa8.88□□□□□ -0.99
AP000253.1-201ENST00000449339 MYCBP2O75592 4640 aa8.86□□□□□ -0.99
AP000253.1-201ENST00000449339 C9orf92A6NGG3 77 aa8.86□□□□□ -0.99
AP000253.1-201ENST00000449339 IGKV2D-30A0A075B6S6 120 aa8.84□□□□□ -0.99
AP000253.1-201ENST00000449339 A8MU10 97 aa8.83□□□□□ -1
AP000253.1-201ENST00000449339 ATP11AUNQ6ZP68 121 aa8.83□□□□□ -1
AP000253.1-201ENST00000449339 DMBT1Q9UGM3 2413 aaPredicted RBP8.83□□□□□ -1
AP000253.1-201ENST00000449339 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
AP000253.1-201ENST00000449339 Q75L30 129 aa8.8□□□□□ -1
AP000253.1-201ENST00000449339 DMAC1Q96GE9 116 aa8.8□□□□□ -1
AP000253.1-201ENST00000449339 ACYP2P14621 99 aa8.79□□□□□ -1
AP000253.1-201ENST00000449339 RBM12B-AS1Q9P1G2 102 aa8.78□□□□□ -1
AP000253.1-201ENST00000449339 MT1HL1P0DM35 61 aa8.78□□□□□ -1
AP000253.1-201ENST00000449339 PRR15LQ9BU68 103 aa8.77□□□□□ -1.01
AP000253.1-201ENST00000449339 KRTAP4-5Q9BYR2 181 aa8.77□□□□□ -1.01
AP000253.1-201ENST00000449339 C20orf166-AS1Q96NR2 134 aa8.77□□□□□ -1.01
AP000253.1-201ENST00000449339 A8MUU9 505 aa8.76□□□□□ -1.01
AP000253.1-201ENST00000449339 LCA10Q71F78 164 aa8.76□□□□□ -1.01
AP000253.1-201ENST00000449339 A6NN06 94 aa8.75□□□□□ -1.01
AP000253.1-201ENST00000449339 C7orf65Q6ZTY9 151 aa8.73□□□□□ -1.01
AP000253.1-201ENST00000449339 CDC42SE1Q9NRR8 79 aa8.72□□□□□ -1.01
AP000253.1-201ENST00000449339 SPTSSBQ8NFR3 76 aa8.7□□□□□ -1.02
AP000253.1-201ENST00000449339 A6NED7 52 aa8.69□□□□□ -1.02
AP000253.1-201ENST00000449339 LINC01558Q9Y6Z2 57 aa8.67□□□□□ -1.02
AP000253.1-201ENST00000449339 ABCA13Q86UQ4 5058 aa8.61□□□□□ -1.03
AP000253.1-201ENST00000449339 BIRC6Q9NR09 4857 aa8.58□□□□□ -1.04
AP000253.1-201ENST00000449339 SPINK7P58062 85 aa8.57□□□□□ -1.04
AP000253.1-201ENST00000449339 XP32Q5T750 250 aa8.53□□□□□ -1.04
AP000253.1-201ENST00000449339 HERC2O95714 4834 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms