RNA–Protein interactions for RNA: ENST00000447733.5

TOM1-209, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-209ENST00000447733 Q1T7F1 81 aa9.26□□□□□ -0.93
TOM1-209ENST00000447733 A0A1B0GVY2 172 aa9.26□□□□□ -0.93
TOM1-209ENST00000447733 CD164Q04900 197 aa9.26□□□□□ -0.93
TOM1-209ENST00000447733 PRR4Q16378 134 aa9.25□□□□□ -0.93
TOM1-209ENST00000447733 KMT2CQ8NEZ4 4911 aaKnown RBP9.24□□□□□ -0.93
TOM1-209ENST00000447733 LRP1BQ9NZR2 4599 aa9.24□□□□□ -0.93
TOM1-209ENST00000447733 A0A087X002 238 aa9.21□□□□□ -0.93
TOM1-209ENST00000447733 SPANXA2-OT1Q8N9U9 137 aa9.21□□□□□ -0.93
TOM1-209ENST00000447733 KRTAP13-2Q52LG2 175 aa9.2□□□□□ -0.94
TOM1-209ENST00000447733 KRTAP1-4P0C5Y4 121 aa9.2□□□□□ -0.94
TOM1-209ENST00000447733 ASB16-AS1Q495Z4 193 aa9.2□□□□□ -0.94
TOM1-209ENST00000447733 CDK2AP2O75956 126 aa9.16□□□□□ -0.94
TOM1-209ENST00000447733 V9GYY9 64 aa9.16□□□□□ -0.94
TOM1-209ENST00000447733 A0A1B0GVX0 72 aa9.16□□□□□ -0.94
TOM1-209ENST00000447733 SPINK6Q6UWN8 80 aa9.14□□□□□ -0.95
TOM1-209ENST00000447733 C8orf17Q9NRJ1 99 aa9.14□□□□□ -0.95
TOM1-209ENST00000447733 PKHD1P08F94 4074 aa9.14□□□□□ -0.95
TOM1-209ENST00000447733 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
TOM1-209ENST00000447733 RYR2Q92736 4967 aa9.13□□□□□ -0.95
TOM1-209ENST00000447733 C1orf195Q5TG92 126 aa9.13□□□□□ -0.95
TOM1-209ENST00000447733 VPS13BQ7Z7G8 4022 aa9.12□□□□□ -0.95
TOM1-209ENST00000447733 IGHV6-1A0A0B4J1U7 121 aa9.11□□□□□ -0.95
TOM1-209ENST00000447733 PLA2G1BP04054 148 aaKnown RBP9.11□□□□□ -0.95
TOM1-209ENST00000447733 PSPHP1O15172 72 aa9.1□□□□□ -0.95
TOM1-209ENST00000447733 DYNC1H1Q14204 4646 aaKnown RBP9.1□□□□□ -0.95
TOM1-209ENST00000447733 SMR3BP02814 79 aaPredicted RBP9.09□□□□□ -0.95
TOM1-209ENST00000447733 IGLV7-46A0A075B6I9 117 aa9.07□□□□□ -0.96
TOM1-209ENST00000447733 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
TOM1-209ENST00000447733 LIMD2Q9BT23 127 aa9.05□□□□□ -0.96
TOM1-209ENST00000447733 RYR3Q15413 4870 aa9.04□□□□□ -0.96
TOM1-209ENST00000447733 MRPL34Q9BQ48 92 aaKnown RBP9.04□□□□□ -0.96
TOM1-209ENST00000447733 A8MUN3 132 aa9.03□□□□□ -0.96
TOM1-209ENST00000447733 KRTAP10-4P60372 401 aaPredicted RBP9.03□□□□□ -0.96
TOM1-209ENST00000447733 C4orf48Q5BLP8 95 aa9.02□□□□□ -0.97
TOM1-209ENST00000447733 NOTCH2NLQ7Z3S9 236 aa9.02□□□□□ -0.97
TOM1-209ENST00000447733 NDUFS5O43920 106 aa9.02□□□□□ -0.97
TOM1-209ENST00000447733 PCOTHQ58A44 107 aa9.02□□□□□ -0.97
TOM1-209ENST00000447733 C8orf87E5RJ46 101 aa9.01□□□□□ -0.97
TOM1-209ENST00000447733 Q8N9P0 234 aaPredicted RBP9□□□□□ -0.97
TOM1-209ENST00000447733 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
TOM1-209ENST00000447733 COA5Q86WW8 74 aa9□□□□□ -0.97
TOM1-209ENST00000447733 SPINK1P00995 79 aa8.99□□□□□ -0.97
TOM1-209ENST00000447733 Q5VV11 94 aa8.99□□□□□ -0.97
TOM1-209ENST00000447733 PRR26Q8N8Z3 221 aa8.98□□□□□ -0.97
TOM1-209ENST00000447733 LINC00304Q8N9R0 145 aa8.96□□□□□ -0.98
TOM1-209ENST00000447733 RPS29P62273 56 aaKnown RBP8.95□□□□□ -0.98
TOM1-209ENST00000447733 SPAG11AQ6PDA7 123 aa8.94□□□□□ -0.98
TOM1-209ENST00000447733 LINC00313P59037 77 aa8.93□□□□□ -0.98
TOM1-209ENST00000447733 CHKB-CPT1BH3BT56 60 aa8.91□□□□□ -0.98
TOM1-209ENST00000447733 PMAIP1Q13794 54 aa8.91□□□□□ -0.98
TOM1-209ENST00000447733 PRR15LQ9BU68 103 aa8.91□□□□□ -0.98
TOM1-209ENST00000447733 KRTAP13-3Q3SY46 172 aa8.91□□□□□ -0.98
TOM1-209ENST00000447733 LOC101927531A0A1B0GV80 90 aa8.89□□□□□ -0.99
TOM1-209ENST00000447733 Q5W150 140 aa8.89□□□□□ -0.99
TOM1-209ENST00000447733 FAT1Q14517 4588 aa8.87□□□□□ -0.99
TOM1-209ENST00000447733 FAM229AH3BQW9 127 aa8.87□□□□□ -0.99
TOM1-209ENST00000447733 Q75L30 129 aa8.87□□□□□ -0.99
TOM1-209ENST00000447733 HRES1P13985 223 aa8.86□□□□□ -0.99
TOM1-209ENST00000447733 A8MU10 97 aa8.85□□□□□ -0.99
TOM1-209ENST00000447733 KRTAP16-1A8MUX0 517 aa8.84□□□□□ -0.99
TOM1-209ENST00000447733 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
TOM1-209ENST00000447733 A6NED7 52 aa8.8□□□□□ -1
TOM1-209ENST00000447733 Q5VSD8 79 aa8.79□□□□□ -1
TOM1-209ENST00000447733 PKHD1L1Q86WI1 4243 aa8.78□□□□□ -1
TOM1-209ENST00000447733 LCA10Q71F78 164 aa8.77□□□□□ -1
TOM1-209ENST00000447733 ATP11AUNQ6ZP68 121 aa8.77□□□□□ -1.01
TOM1-209ENST00000447733 EPPK1P58107 5090 aaKnown RBP8.74□□□□□ -1.01
TOM1-209ENST00000447733 CDC42SE1Q9NRR8 79 aa8.74□□□□□ -1.01
TOM1-209ENST00000447733 SPTSSBQ8NFR3 76 aa8.72□□□□□ -1.01
TOM1-209ENST00000447733 ACYP2P14621 99 aa8.71□□□□□ -1.02
TOM1-209ENST00000447733 HSPG2P98160 4391 aa8.7□□□□□ -1.02
TOM1-209ENST00000447733 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
TOM1-209ENST00000447733 IGKV2-30P06310 120 aa8.69□□□□□ -1.02
TOM1-209ENST00000447733 RETNLBQ9BQ08 111 aa8.69□□□□□ -1.02
TOM1-209ENST00000447733 KRTAP10-8P60410 259 aa8.68□□□□□ -1.02
TOM1-209ENST00000447733 KTN1-AS1Q86SY8 53 aa8.68□□□□□ -1.02
TOM1-209ENST00000447733 RYR1P21817 5038 aa8.66□□□□□ -1.02
TOM1-209ENST00000447733 Q8N1X5 172 aa8.65□□□□□ -1.02
TOM1-209ENST00000447733 A6NN06 94 aa8.64□□□□□ -1.03
TOM1-209ENST00000447733 KRTAP17-1Q9BYP8 105 aa8.63□□□□□ -1.03
TOM1-209ENST00000447733 SPINK7P58062 85 aa8.63□□□□□ -1.03
TOM1-209ENST00000447733 FLG2Q5D862 2391 aaPredicted RBP8.61□□□□□ -1.03
TOM1-209ENST00000447733 C9orf92A6NGG3 77 aa8.61□□□□□ -1.03
TOM1-209ENST00000447733 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
TOM1-209ENST00000447733 C20orf166-AS1Q96NR2 134 aa8.59□□□□□ -1.03
TOM1-209ENST00000447733 A8MUU9 505 aa8.58□□□□□ -1.04
TOM1-209ENST00000447733 TNXBP22105 4242 aa8.56□□□□□ -1.04
TOM1-209ENST00000447733 IGKV2D-30A0A075B6S6 120 aa8.56□□□□□ -1.04
TOM1-209ENST00000447733 LRP1Q07954 4544 aaKnown RBP8.55□□□□□ -1.04
TOM1-209ENST00000447733 C7orf65Q6ZTY9 151 aa8.51□□□□□ -1.05
TOM1-209ENST00000447733 FAT3Q8TDW7 4589 aa8.5□□□□□ -1.05
TOM1-209ENST00000447733 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
TOM1-209ENST00000447733 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
TOM1-209ENST00000447733 A0A1B0GU69 56 aa8.46□□□□□ -1.05
TOM1-209ENST00000447733 MYCBP2O75592 4640 aa8.38□□□□□ -1.07
TOM1-209ENST00000447733 DMBT1Q9UGM3 2413 aaPredicted RBP8.38□□□□□ -1.07
TOM1-209ENST00000447733 SPATA8Q6RVD6 105 aa8.37□□□□□ -1.07
TOM1-209ENST00000447733 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
TOM1-209ENST00000447733 RPL37P61927 97 aaKnown RBP8.34□□□□□ -1.08
TOM1-209ENST00000447733 XP32Q5T750 250 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms