RNA–Protein interactions for RNA: ENST00000439040.5

ATP13A3-203, Transcript of ATPase 13A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATP13A3, Length 7,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-203ENST00000439040 ATMQ13315 3056 aa2.21□□□□□ -2.06
ATP13A3-203ENST00000439040 CSMD2Q7Z408 3487 aa2.2□□□□□ -2.06
ATP13A3-203ENST00000439040 Q6ZSA8 131 aa2.2□□□□□ -2.06
ATP13A3-203ENST00000439040 MAP1AP78559 2803 aaPredicted RBP2.19□□□□□ -2.06
ATP13A3-203ENST00000439040 APCP25054 2843 aa2.19□□□□□ -2.06
ATP13A3-203ENST00000439040 SRRM2Q9UQ35 2752 aaKnown RBP2.19□□□□□ -2.06
ATP13A3-203ENST00000439040 CENPEQ02224 2701 aa2.18□□□□□ -2.06
ATP13A3-203ENST00000439040 COL12A1Q99715 3063 aa2.18□□□□□ -2.06
ATP13A3-203ENST00000439040 TEX15Q9BXT5 2789 aa2.17□□□□□ -2.06
ATP13A3-203ENST00000439040 FLNAP21333 2647 aaKnown RBP2.16□□□□□ -2.06
ATP13A3-203ENST00000439040 BAHCC1Q9P281 2608 aa2.16□□□□□ -2.06
ATP13A3-203ENST00000439040 COL6A5A8TX70 2615 aa2.16□□□□□ -2.06
ATP13A3-203ENST00000439040 UNC79Q9P2D8 2635 aa2.15□□□□□ -2.06
ATP13A3-203ENST00000439040 USP24Q9UPU5 2620 aa2.15□□□□□ -2.07
ATP13A3-203ENST00000439040 KRTAP23-1A1A580 65 aa2.14□□□□□ -2.07
ATP13A3-203ENST00000439040 CUBNO60494 3623 aa2.13□□□□□ -2.07
ATP13A3-203ENST00000439040 KRTAP13-1Q8IUC0 172 aa2.13□□□□□ -2.07
ATP13A3-203ENST00000439040 NOTCH1P46531 2555 aa2.13□□□□□ -2.07
ATP13A3-203ENST00000439040 ITPR3Q14573 2671 aa2.13□□□□□ -2.07
ATP13A3-203ENST00000439040 KRTAP10-2P60368 255 aa2.13□□□□□ -2.07
ATP13A3-203ENST00000439040 KRTAP15-1Q3LI76 137 aa2.12□□□□□ -2.07
ATP13A3-203ENST00000439040 KRTAP10-1P60331 282 aa2.12□□□□□ -2.07
ATP13A3-203ENST00000439040 MUC3AQ02505 3323 aa2.12□□□□□ -2.07
ATP13A3-203ENST00000439040 FASNP49327 2511 aaKnown RBP2.12□□□□□ -2.07
ATP13A3-203ENST00000439040 TNP1P09430 55 aa2.11□□□□□ -2.07
ATP13A3-203ENST00000439040 TPRXLQ17RH7 258 aa2.11□□□□□ -2.07
ATP13A3-203ENST00000439040 KRTAP13-2Q52LG2 175 aa2.11□□□□□ -2.07
ATP13A3-203ENST00000439040 NSD1Q96L73 2696 aaPredicted RBP2.11□□□□□ -2.07
ATP13A3-203ENST00000439040 HRNRQ86YZ3 2850 aaPredicted RBP2.11□□□□□ -2.07
ATP13A3-203ENST00000439040 NBEAL1Q6ZS30 2694 aa2.11□□□□□ -2.07
ATP13A3-203ENST00000439040 CRYBG3Q68DQ2 2970 aa2.11□□□□□ -2.07
ATP13A3-203ENST00000439040 UBR5O95071 2799 aaPredicted RBP2.11□□□□□ -2.07
ATP13A3-203ENST00000439040 CELSR1Q9NYQ6 3014 aa2.1□□□□□ -2.07
ATP13A3-203ENST00000439040 M0R2T5 61 aa2.1□□□□□ -2.07
ATP13A3-203ENST00000439040 CFAP46Q8IYW2 2715 aa2.09□□□□□ -2.07
ATP13A3-203ENST00000439040 ATRQ13535 2644 aa2.09□□□□□ -2.07
ATP13A3-203ENST00000439040 VPS13CQ709C8 3753 aa2.09□□□□□ -2.07
ATP13A3-203ENST00000439040 DCHS2Q6V1P9 2916 aa2.08□□□□□ -2.08
ATP13A3-203ENST00000439040 LCE2DQ5TA82 110 aaPredicted RBP2.08□□□□□ -2.08
ATP13A3-203ENST00000439040 PRO2289Q9P1D8 64 aa2.08□□□□□ -2.08
ATP13A3-203ENST00000439040 INE1O15225 51 aa2.08□□□□□ -2.08
ATP13A3-203ENST00000439040 BSNQ9UPA5 3926 aa2.07□□□□□ -2.08
ATP13A3-203ENST00000439040 HELZ2Q9BYK8 2649 aaKnown RBP2.07□□□□□ -2.08
ATP13A3-203ENST00000439040 UTP20O75691 2785 aaKnown RBP2.07□□□□□ -2.08
ATP13A3-203ENST00000439040 Q6ZRN7 208 aaPredicted RBP2.06□□□□□ -2.08
ATP13A3-203ENST00000439040 SETXQ7Z333 2677 aaKnown RBP2.05□□□□□ -2.08
ATP13A3-203ENST00000439040 ZNF292O60281 2723 aa2.05□□□□□ -2.08
ATP13A3-203ENST00000439040 KRTAP3-3Q9BYR6 98 aa2.05□□□□□ -2.08
ATP13A3-203ENST00000439040 KRTAP3-2Q9BYR7 98 aa2.05□□□□□ -2.08
ATP13A3-203ENST00000439040 HIVEP1P15822 2718 aa2.05□□□□□ -2.08
ATP13A3-203ENST00000439040 FBN2P35556 2912 aa2.05□□□□□ -2.08
ATP13A3-203ENST00000439040 KRTAP12-2P59991 146 aa2.04□□□□□ -2.08
ATP13A3-203ENST00000439040 KRTAP13-3Q3SY46 172 aa2.04□□□□□ -2.08
ATP13A3-203ENST00000439040 CELSR2Q9HCU4 2923 aa2.04□□□□□ -2.08
ATP13A3-203ENST00000439040 AKAP9Q99996 3911 aa2.04□□□□□ -2.08
ATP13A3-203ENST00000439040 RPS29P62273 56 aaKnown RBP2.03□□□□□ -2.08
ATP13A3-203ENST00000439040 Q5VSD8 79 aa2.03□□□□□ -2.08
ATP13A3-203ENST00000439040 STAB2Q8WWQ8 2551 aa2.03□□□□□ -2.08
ATP13A3-203ENST00000439040 NBPF19A0A087WUL8 3843 aa2.03□□□□□ -2.09
ATP13A3-203ENST00000439040 MGAM2Q2M2H8 2515 aa2.02□□□□□ -2.09
ATP13A3-203ENST00000439040 TEP1Q99973 2627 aaKnown RBP2.02□□□□□ -2.09
ATP13A3-203ENST00000439040 ALMS1Q8TCU4 4167 aa2.02□□□□□ -2.09
ATP13A3-203ENST00000439040 MAST4O15021 2626 aa2.02□□□□□ -2.09
ATP13A3-203ENST00000439040 FLNBO75369 2602 aaKnown RBP2.02□□□□□ -2.09
ATP13A3-203ENST00000439040 MXRA5Q9NR99 2828 aa2□□□□□ -2.09
ATP13A3-203ENST00000439040 TGP01266 2768 aa2□□□□□ -2.09
ATP13A3-203ENST00000439040 ITPR2Q14571 2701 aa2□□□□□ -2.09
ATP13A3-203ENST00000439040 STAB1Q9NY15 2570 aa1.99□□□□□ -2.09
ATP13A3-203ENST00000439040 KRTAP17-1Q9BYP8 105 aa1.99□□□□□ -2.09
ATP13A3-203ENST00000439040 ZANQ9Y493 2812 aa1.99□□□□□ -2.09
ATP13A3-203ENST00000439040 NF1P21359 2839 aa1.98□□□□□ -2.09
ATP13A3-203ENST00000439040 KRTAP1-4P0C5Y4 121 aa1.97□□□□□ -2.09
ATP13A3-203ENST00000439040 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
ATP13A3-203ENST00000439040 CSMD3Q7Z407 3707 aa1.96□□□□□ -2.1
ATP13A3-203ENST00000439040 KRTAP13-4Q3LI77 160 aa1.95□□□□□ -2.1
ATP13A3-203ENST00000439040 OTOGQ6ZRI0 2925 aa1.94□□□□□ -2.1
ATP13A3-203ENST00000439040 XP32Q5T750 250 aa1.94□□□□□ -2.1
ATP13A3-203ENST00000439040 TENM2Q9NT68 2774 aa1.94□□□□□ -2.1
ATP13A3-203ENST00000439040 A0A1B0GVY2 172 aa1.94□□□□□ -2.1
ATP13A3-203ENST00000439040 KRTAP3-1Q9BYR8 98 aa1.93□□□□□ -2.1
ATP13A3-203ENST00000439040 IGSF10Q6WRI0 2623 aa1.92□□□□□ -2.1
ATP13A3-203ENST00000439040 NIPBLQ6KC79 2804 aaeCLIP1.91□□□□□ -2.11e-5■■■■□ 22.3
ATP13A3-203ENST00000439040 FBN1P35555 2871 aaKnown RBP1.91□□□□□ -2.1
ATP13A3-203ENST00000439040 PDZD2O15018 2839 aa1.9□□□□□ -2.11
ATP13A3-203ENST00000439040 TRRAPQ9Y4A5 3859 aa1.9□□□□□ -2.11
ATP13A3-203ENST00000439040 FLNCQ14315 2725 aa1.89□□□□□ -2.11
ATP13A3-203ENST00000439040 KRTAP10-6P60371 365 aaPredicted RBP1.89□□□□□ -2.11
ATP13A3-203ENST00000439040 FRAS1Q86XX4 4008 aa1.88□□□□□ -2.11
ATP13A3-203ENST00000439040 TENM3Q9P273 2699 aa1.87□□□□□ -2.11
ATP13A3-203ENST00000439040 ANK3Q12955 4377 aaKnown RBP1.86□□□□□ -2.11
ATP13A3-203ENST00000439040 ZNF469Q96JG9 3925 aaPredicted RBP1.86□□□□□ -2.11
ATP13A3-203ENST00000439040 PKD1L1Q8TDX9 2849 aa1.85□□□□□ -2.11
ATP13A3-203ENST00000439040 COL7A1Q02388 2944 aa1.85□□□□□ -2.11
ATP13A3-203ENST00000439040 TENM4Q6N022 2769 aa1.84□□□□□ -2.12
ATP13A3-203ENST00000439040 HUWE1Q7Z6Z7 4374 aaKnown RBP1.82□□□□□ -2.12
ATP13A3-203ENST00000439040 ANK2Q01484 3957 aa1.82□□□□□ -2.12
ATP13A3-203ENST00000439040 DNAH10Q8IVF4 4471 aa1.8□□□□□ -2.12
ATP13A3-203ENST00000439040 CMYA5Q8N3K9 4069 aa1.8□□□□□ -2.12
ATP13A3-203ENST00000439040 MEGF8Q7Z7M0 2845 aa1.8□□□□□ -2.12
ATP13A3-203ENST00000439040 KRTAP10-10P60014 251 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms