RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 DSCR10P59022 87 aa10.39□□□□□ -0.75
HMGN1-206ENST00000431390 IGKV4-1P06312 121 aa10.39□□□□□ -0.75
HMGN1-206ENST00000431390 C1orf195Q5TG92 126 aa10.38□□□□□ -0.75
HMGN1-206ENST00000431390 A8MWP4 228 aa10.35□□□□□ -0.75
HMGN1-206ENST00000431390 HIST1H4AP62805 103 aaKnown RBP10.34□□□□□ -0.75
HMGN1-206ENST00000431390 K7EQZ3 153 aa10.32□□□□□ -0.76
HMGN1-206ENST00000431390 NDUFB1O75438 58 aa10.32□□□□□ -0.76
HMGN1-206ENST00000431390 Q8N9L7 120 aa10.32□□□□□ -0.76
HMGN1-206ENST00000431390 PRR15Q8IV56 129 aa10.31□□□□□ -0.76
HMGN1-206ENST00000431390 A0A087WVE0 104 aa10.27□□□□□ -0.76
HMGN1-206ENST00000431390 A0A1B0GVX0 72 aa10.27□□□□□ -0.76
HMGN1-206ENST00000431390 IGHV6-1A0A0B4J1U7 121 aa10.22□□□□□ -0.77
HMGN1-206ENST00000431390 RETNLBQ9BQ08 111 aa10.21□□□□□ -0.78
HMGN1-206ENST00000431390 HCG22E2RYF7 251 aa10.2□□□□□ -0.78
HMGN1-206ENST00000431390 C8orf87E5RJ46 101 aa10.19□□□□□ -0.78
HMGN1-206ENST00000431390 SCGB1A1P11684 91 aa10.19□□□□□ -0.78
HMGN1-206ENST00000431390 C8orf17Q9NRJ1 99 aa10.19□□□□□ -0.78
HMGN1-206ENST00000431390 MMP24-AS1A0A0U1RRL7 71 aa10.18□□□□□ -0.78
HMGN1-206ENST00000431390 FAM236AA0A1B0GUQ0 79 aa10.18□□□□□ -0.78
HMGN1-206ENST00000431390 FAM236BA0A1B0GV22 79 aa10.18□□□□□ -0.78
HMGN1-206ENST00000431390 FP248Q71RG6 208 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-206ENST00000431390 LINC00313P59037 77 aa10.14□□□□□ -0.79
HMGN1-206ENST00000431390 CASC2Q6XLA1 102 aa10.14□□□□□ -0.79
HMGN1-206ENST00000431390 NOTCH2NLQ7Z3S9 236 aa10.14□□□□□ -0.79
HMGN1-206ENST00000431390 WFDC13Q8IUB5 93 aa10.14□□□□□ -0.79
HMGN1-206ENST00000431390 hDV103S1A0JD37 113 aa10.13□□□□□ -0.79
HMGN1-206ENST00000431390 LPAP08519 4548 aa10.1□□□□□ -0.79
HMGN1-206ENST00000431390 TMEM254Q8TBM7 123 aa10.09□□□□□ -0.79
HMGN1-206ENST00000431390 ATOX1O00244 68 aa10.08□□□□□ -0.8
HMGN1-206ENST00000431390 MRPL34Q9BQ48 92 aaKnown RBP10.07□□□□□ -0.8
HMGN1-206ENST00000431390 IGLV7-46A0A075B6I9 117 aa10.06□□□□□ -0.8
HMGN1-206ENST00000431390 KRTAP16-1A8MUX0 517 aa10.05□□□□□ -0.8
HMGN1-206ENST00000431390 PRR4Q16378 134 aa10.02□□□□□ -0.81
HMGN1-206ENST00000431390 SMIM20Q8N5G0 67 aa10.02□□□□□ -0.81
HMGN1-206ENST00000431390 C9orf92A6NGG3 77 aa10.01□□□□□ -0.81
HMGN1-206ENST00000431390 Q8N9P0 234 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-206ENST00000431390 OCR1Q9BZK8 76 aa9.99□□□□□ -0.81
HMGN1-206ENST00000431390 KRTAP13-3Q3SY46 172 aa9.97□□□□□ -0.81
HMGN1-206ENST00000431390 ANAPC13Q9BS18 74 aa9.97□□□□□ -0.81
HMGN1-206ENST00000431390 TRAV7A0A075B6U4 112 aa9.96□□□□□ -0.82
HMGN1-206ENST00000431390 NDUFS5O43920 106 aa9.96□□□□□ -0.82
HMGN1-206ENST00000431390 TP53AIP1Q9HCN2 124 aa9.96□□□□□ -0.82
HMGN1-206ENST00000431390 TPRXLQ17RH7 258 aa9.94□□□□□ -0.82
HMGN1-206ENST00000431390 SERP2Q8N6R1 65 aa9.93□□□□□ -0.82
HMGN1-206ENST00000431390 C20orf166-AS1Q96NR2 134 aa9.92□□□□□ -0.82
HMGN1-206ENST00000431390 UQCRQO14949 82 aa9.92□□□□□ -0.82
HMGN1-206ENST00000431390 A8MUU9 505 aa9.9□□□□□ -0.82
HMGN1-206ENST00000431390 KRTAP9-2Q9BYQ4 174 aa9.88□□□□□ -0.83
HMGN1-206ENST00000431390 MUC2Q02817 5179 aa9.87□□□□□ -0.83
HMGN1-206ENST00000431390 COX7CP15954 63 aa9.87□□□□□ -0.83
HMGN1-206ENST00000431390 XP32Q5T750 250 aa9.87□□□□□ -0.83
HMGN1-206ENST00000431390 Q75L30 129 aa9.87□□□□□ -0.83
HMGN1-206ENST00000431390 KRTAP3-3Q9BYR6 98 aa9.87□□□□□ -0.83
HMGN1-206ENST00000431390 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
HMGN1-206ENST00000431390 C5orf47Q569G3 176 aa9.84□□□□□ -0.83
HMGN1-206ENST00000431390 TRAV22A0A0B4J277 110 aa9.83□□□□□ -0.84
HMGN1-206ENST00000431390 PCP4P48539 62 aa9.81□□□□□ -0.84
HMGN1-206ENST00000431390 H0Y9P7 68 aa9.8□□□□□ -0.84
HMGN1-206ENST00000431390 RPL37P61927 97 aaKnown RBP9.8□□□□□ -0.84
HMGN1-206ENST00000431390 Q5W150 140 aa9.8□□□□□ -0.84
HMGN1-206ENST00000431390 A0A0U1RQV1 116 aa9.79□□□□□ -0.84
HMGN1-206ENST00000431390 MP68P56378 58 aa9.79□□□□□ -0.84
HMGN1-206ENST00000431390 ZCCHC13Q8WW36 166 aaKnown RBP9.79□□□□□ -0.84
HMGN1-206ENST00000431390 H3BPC8 53 aa9.76□□□□□ -0.85
HMGN1-206ENST00000431390 C20orf197Q8N268 126 aa9.74□□□□□ -0.85
HMGN1-206ENST00000431390 CCDC179H3BU77 68 aa9.72□□□□□ -0.85
HMGN1-206ENST00000431390 ATP11AUNQ6ZP68 121 aa9.72□□□□□ -0.85
HMGN1-206ENST00000431390 LINC00208Q96KT6 92 aa9.71□□□□□ -0.85
HMGN1-206ENST00000431390 KLKP1Q107X0 134 aa9.71□□□□□ -0.86
HMGN1-206ENST00000431390 LCE2AQ5TA79 106 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-206ENST00000431390 KRTAP9-6A0A140TA67 174 aa9.69□□□□□ -0.86
HMGN1-206ENST00000431390 C1orf64Q8NEQ6 169 aa9.69□□□□□ -0.86
HMGN1-206ENST00000431390 FAT4Q6V0I7 4981 aa9.68□□□□□ -0.86
HMGN1-206ENST00000431390 LOC101927531A0A1B0GV80 90 aa9.68□□□□□ -0.86
HMGN1-206ENST00000431390 SNURFQ9Y675 71 aa9.67□□□□□ -0.86
HMGN1-206ENST00000431390 IGKV2-30P06310 120 aa9.65□□□□□ -0.86
HMGN1-206ENST00000431390 SEC61BP60468 96 aaKnown RBP9.6□□□□□ -0.87
HMGN1-206ENST00000431390 PCOTHQ58A44 107 aa9.6□□□□□ -0.87
HMGN1-206ENST00000431390 C7orf65Q6ZTY9 151 aa9.6□□□□□ -0.87
HMGN1-206ENST00000431390 CYP4F30PQ9H0H9 118 aa9.6□□□□□ -0.87
HMGN1-206ENST00000431390 NDUFC1O43677 76 aa9.59□□□□□ -0.87
HMGN1-206ENST00000431390 IGKV2D-30A0A075B6S6 120 aa9.58□□□□□ -0.88
HMGN1-206ENST00000431390 CYSTM1Q9H1C7 97 aa9.58□□□□□ -0.88
HMGN1-206ENST00000431390 SPINK7P58062 85 aa9.54□□□□□ -0.88
HMGN1-206ENST00000431390 H7BZZ5 65 aa9.54□□□□□ -0.88
HMGN1-206ENST00000431390 MUC17Q685J3 4493 aa9.52□□□□□ -0.89
HMGN1-206ENST00000431390 HRES1P13985 223 aa9.44□□□□□ -0.9
HMGN1-206ENST00000431390 SPANXA2-OT1Q8N9U9 137 aa9.43□□□□□ -0.9
HMGN1-206ENST00000431390 TMEM258P61165 79 aa9.42□□□□□ -0.9
HMGN1-206ENST00000431390 ATP5EP56381 51 aaPredicted RBP9.35□□□□□ -0.91
HMGN1-206ENST00000431390 FAM236DA0A1B0GTK5 79 aa9.34□□□□□ -0.91
HMGN1-206ENST00000431390 FAM236CP0DP71 79 aa9.34□□□□□ -0.91
HMGN1-206ENST00000431390 C4orf26Q17RF5 130 aa9.34□□□□□ -0.91
HMGN1-206ENST00000431390 KRTAP4-1Q9BYQ7 146 aa9.34□□□□□ -0.91
HMGN1-206ENST00000431390 MPLKIPQ8TAP9 179 aa9.3□□□□□ -0.92
HMGN1-206ENST00000431390 COX6B2Q6YFQ2 88 aa9.29□□□□□ -0.92
HMGN1-206ENST00000431390 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
HMGN1-206ENST00000431390 FSIP2Q5CZC0 6907 aa9.28□□□□□ -0.92
HMGN1-206ENST00000431390 A8MUN3 132 aa9.26□□□□□ -0.93
HMGN1-206ENST00000431390 RBM12B-AS1Q9P1G2 102 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms