RNA–Protein interactions for RNA: ENST00000428284.2

HOXA4-202, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA4, Length 1,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-202ENST00000428284 NDUFB1O75438 58 aa11.35□□□□□ -0.59
HOXA4-202ENST00000428284 CDIP1Q9H305 208 aa11.35□□□□□ -0.59
HOXA4-202ENST00000428284 IGHV6-1A0A0B4J1U7 121 aa11.34□□□□□ -0.59
HOXA4-202ENST00000428284 A0A1B0GVX0 72 aa11.34□□□□□ -0.59
HOXA4-202ENST00000428284 PCP4P48539 62 aa11.33□□□□□ -0.6
HOXA4-202ENST00000428284 DSCR10P59022 87 aa11.33□□□□□ -0.6
HOXA4-202ENST00000428284 IGKV3D-7A0A0C4DH55 119 aa11.31□□□□□ -0.6
HOXA4-202ENST00000428284 K7ERU9 68 aa11.31□□□□□ -0.6
HOXA4-202ENST00000428284 K7EQZ3 153 aa11.28□□□□□ -0.6
HOXA4-202ENST00000428284 LINC00313P59037 77 aa11.28□□□□□ -0.6
HOXA4-202ENST00000428284 PRR15Q8IV56 129 aa11.28□□□□□ -0.6
HOXA4-202ENST00000428284 C8orf87E5RJ46 101 aa11.26□□□□□ -0.61
HOXA4-202ENST00000428284 NOTCH2NLQ7Z3S9 236 aa11.26□□□□□ -0.61
HOXA4-202ENST00000428284 Q8N9L7 120 aa11.26□□□□□ -0.61
HOXA4-202ENST00000428284 CXCL6P80162 114 aa11.25□□□□□ -0.61
HOXA4-202ENST00000428284 XP32Q5T750 250 aa11.25□□□□□ -0.61
HOXA4-202ENST00000428284 ATP5EP2Q5VTU8 51 aa11.22□□□□□ -0.61
HOXA4-202ENST00000428284 LINC00643Q86TS7 51 aa11.22□□□□□ -0.61
HOXA4-202ENST00000428284 C8orf17Q9NRJ1 99 aa11.21□□□□□ -0.61
HOXA4-202ENST00000428284 KRTAP16-1A8MUX0 517 aa11.16□□□□□ -0.62
HOXA4-202ENST00000428284 MMP24-AS1A0A0U1RRL7 71 aa11.16□□□□□ -0.62
HOXA4-202ENST00000428284 RNF213Q63HN8 5207 aa11.11□□□□□ -0.63
HOXA4-202ENST00000428284 hDV103S1A0JD37 113 aa11.11□□□□□ -0.63
HOXA4-202ENST00000428284 RPL37P61927 97 aaKnown RBP11.11□□□□□ -0.63
HOXA4-202ENST00000428284 HIST1H4AP62805 103 aaKnown RBP11.11□□□□□ -0.63
HOXA4-202ENST00000428284 WFDC13Q8IUB5 93 aa11.11□□□□□ -0.63
HOXA4-202ENST00000428284 C20orf166-AS1Q96NR2 134 aa11.11□□□□□ -0.63
HOXA4-202ENST00000428284 Q75L30 129 aa11.1□□□□□ -0.63
HOXA4-202ENST00000428284 A8MUU9 505 aa11.08□□□□□ -0.64
HOXA4-202ENST00000428284 HCG22E2RYF7 251 aa11.08□□□□□ -0.64
HOXA4-202ENST00000428284 TMEM254Q8TBM7 123 aa11.08□□□□□ -0.64
HOXA4-202ENST00000428284 CASC2Q6XLA1 102 aa11.07□□□□□ -0.64
HOXA4-202ENST00000428284 MRPL34Q9BQ48 92 aaKnown RBP11.07□□□□□ -0.64
HOXA4-202ENST00000428284 SEC61BP60468 96 aaKnown RBP11.06□□□□□ -0.64
HOXA4-202ENST00000428284 MT-ATP8P03928 68 aa11.03□□□□□ -0.64
HOXA4-202ENST00000428284 Q8N9P0 234 aaPredicted RBP11.03□□□□□ -0.64
HOXA4-202ENST00000428284 PCOTHQ58A44 107 aa11.01□□□□□ -0.65
HOXA4-202ENST00000428284 ATP11AUNQ6ZP68 121 aa11.01□□□□□ -0.65
HOXA4-202ENST00000428284 NDUFS5O43920 106 aa11□□□□□ -0.65
HOXA4-202ENST00000428284 A0A087WVE0 104 aa10.99□□□□□ -0.65
HOXA4-202ENST00000428284 MUC17Q685J3 4493 aa10.98□□□□□ -0.65
HOXA4-202ENST00000428284 IMUPQ9GZP8 106 aa10.9□□□□□ -0.66
HOXA4-202ENST00000428284 ZCCHC13Q8WW36 166 aaKnown RBP10.9□□□□□ -0.67
HOXA4-202ENST00000428284 SVIPQ8NHG7 77 aa10.88□□□□□ -0.67
HOXA4-202ENST00000428284 TP53AIP1Q9HCN2 124 aa10.82□□□□□ -0.68
HOXA4-202ENST00000428284 KRTAP4-1Q9BYQ7 146 aa10.81□□□□□ -0.68
HOXA4-202ENST00000428284 MUC2Q02817 5179 aa10.79□□□□□ -0.68
HOXA4-202ENST00000428284 Q5W150 140 aa10.78□□□□□ -0.68
HOXA4-202ENST00000428284 SCGB1A1P11684 91 aa10.77□□□□□ -0.68
HOXA4-202ENST00000428284 FAM236AA0A1B0GUQ0 79 aa10.74□□□□□ -0.69
HOXA4-202ENST00000428284 FAM236BA0A1B0GV22 79 aa10.74□□□□□ -0.69
HOXA4-202ENST00000428284 A0A0U1RQV1 116 aa10.7□□□□□ -0.7
HOXA4-202ENST00000428284 UQCRQO14949 82 aa10.69□□□□□ -0.7
HOXA4-202ENST00000428284 OCR1Q9BZK8 76 aa10.69□□□□□ -0.7
HOXA4-202ENST00000428284 TRAV22A0A0B4J277 110 aa10.68□□□□□ -0.7
HOXA4-202ENST00000428284 SPINK7P58062 85 aa10.68□□□□□ -0.7
HOXA4-202ENST00000428284 IGKV2D-30A0A075B6S6 120 aa10.66□□□□□ -0.7
HOXA4-202ENST00000428284 IGKV2-30P06310 120 aa10.66□□□□□ -0.7
HOXA4-202ENST00000428284 C7orf65Q6ZTY9 151 aa10.62□□□□□ -0.71
HOXA4-202ENST00000428284 H0Y9P7 68 aa10.61□□□□□ -0.71
HOXA4-202ENST00000428284 ATOX1O00244 68 aa10.59□□□□□ -0.71
HOXA4-202ENST00000428284 SMIM20Q8N5G0 67 aa10.58□□□□□ -0.72
HOXA4-202ENST00000428284 FAT4Q6V0I7 4981 aa10.56□□□□□ -0.72
HOXA4-202ENST00000428284 HRES1P13985 223 aa10.56□□□□□ -0.72
HOXA4-202ENST00000428284 MP68P56378 58 aa10.55□□□□□ -0.72
HOXA4-202ENST00000428284 C5orf47Q569G3 176 aa10.54□□□□□ -0.72
HOXA4-202ENST00000428284 TRAV7A0A075B6U4 112 aa10.53□□□□□ -0.72
HOXA4-202ENST00000428284 LOC101927531A0A1B0GV80 90 aa10.53□□□□□ -0.72
HOXA4-202ENST00000428284 C1orf64Q8NEQ6 169 aa10.5□□□□□ -0.73
HOXA4-202ENST00000428284 LINC00208Q96KT6 92 aa10.5□□□□□ -0.73
HOXA4-202ENST00000428284 RBM12B-AS1Q9P1G2 102 aa10.49□□□□□ -0.73
HOXA4-202ENST00000428284 CYP4F30PQ9H0H9 118 aa10.48□□□□□ -0.73
HOXA4-202ENST00000428284 COX6B2Q6YFQ2 88 aa10.48□□□□□ -0.73
HOXA4-202ENST00000428284 MPLKIPQ8TAP9 179 aa10.47□□□□□ -0.73
HOXA4-202ENST00000428284 KRTAP19-2Q3LHN2 52 aa10.45□□□□□ -0.74
HOXA4-202ENST00000428284 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
HOXA4-202ENST00000428284 H3BPC8 53 aa10.44□□□□□ -0.74
HOXA4-202ENST00000428284 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
HOXA4-202ENST00000428284 SERP2Q8N6R1 65 aa10.43□□□□□ -0.74
HOXA4-202ENST00000428284 LCE2AQ5TA79 106 aaPredicted RBP10.4□□□□□ -0.74
HOXA4-202ENST00000428284 C4orf26Q17RF5 130 aa10.39□□□□□ -0.75
HOXA4-202ENST00000428284 LCE2CQ5TA81 110 aa10.38□□□□□ -0.75
HOXA4-202ENST00000428284 KLKP1Q107X0 134 aa10.33□□□□□ -0.76
HOXA4-202ENST00000428284 ANAPC13Q9BS18 74 aa10.33□□□□□ -0.76
HOXA4-202ENST00000428284 COX7CP15954 63 aa10.31□□□□□ -0.76
HOXA4-202ENST00000428284 C20orf197Q8N268 126 aa10.31□□□□□ -0.76
HOXA4-202ENST00000428284 SNURFQ9Y675 71 aa10.3□□□□□ -0.76
HOXA4-202ENST00000428284 MT1HP80294 61 aa10.23□□□□□ -0.77
HOXA4-202ENST00000428284 H1FX-AS1Q4G0G2 97 aa10.22□□□□□ -0.77
HOXA4-202ENST00000428284 KRTAP3-1Q9BYR8 98 aa10.21□□□□□ -0.78
HOXA4-202ENST00000428284 FLGP20930 4061 aaPredicted RBP10.2□□□□□ -0.78
HOXA4-202ENST00000428284 CCDC179H3BU77 68 aa10.18□□□□□ -0.78
HOXA4-202ENST00000428284 CYSTM1Q9H1C7 97 aa10.16□□□□□ -0.78
HOXA4-202ENST00000428284 M0R2T5 61 aa10.15□□□□□ -0.78
HOXA4-202ENST00000428284 A8MUN3 132 aa10.1□□□□□ -0.79
HOXA4-202ENST00000428284 S4R3F8 94 aa10.05□□□□□ -0.8
HOXA4-202ENST00000428284 DMAC1Q96GE9 116 aa10.05□□□□□ -0.8
HOXA4-202ENST00000428284 NDUFC1O43677 76 aa10.04□□□□□ -0.8
HOXA4-202ENST00000428284 H7BZZ5 65 aa10.03□□□□□ -0.8
HOXA4-202ENST00000428284 SPANXA2-OT1Q8N9U9 137 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms