RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 Q96NJ1 140 aa6.78□□□□□ -1.32
VEGFB-202ENST00000426086 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
VEGFB-202ENST00000426086 TRBV7-7A0A0K0K1E9 115 aa6.77□□□□□ -1.33
VEGFB-202ENST00000426086 BAALC-AS2P0C853 105 aa6.77□□□□□ -1.33
VEGFB-202ENST00000426086 SYNE2Q8WXH0 6885 aaKnown RBP6.77□□□□□ -1.33
VEGFB-202ENST00000426086 KRTAP19-6Q3LI70 58 aa6.76□□□□□ -1.33
VEGFB-202ENST00000426086 H3BMG7 143 aa6.75□□□□□ -1.33
VEGFB-202ENST00000426086 IGFL1Q6UW32 110 aa6.75□□□□□ -1.33
VEGFB-202ENST00000426086 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
VEGFB-202ENST00000426086 KRTAP16-1A8MUX0 517 aa6.74□□□□□ -1.33
VEGFB-202ENST00000426086 A8MUU9 505 aa6.73□□□□□ -1.33
VEGFB-202ENST00000426086 ANKRD29Q8N6D5 301 aa6.72□□□□□ -1.33
VEGFB-202ENST00000426086 SPCS1Q9Y6A9 102 aa6.72□□□□□ -1.33
VEGFB-202ENST00000426086 C9JAW5 83 aa6.71□□□□□ -1.34
VEGFB-202ENST00000426086 KRTAP6-3Q3LI67 103 aa6.71□□□□□ -1.34
VEGFB-202ENST00000426086 JMJD7-PLA2G4BH0Y9G9 81 aa6.7□□□□□ -1.34
VEGFB-202ENST00000426086 H3BT86 120 aa6.7□□□□□ -1.34
VEGFB-202ENST00000426086 RBM3P98179 157 aaKnown RBP6.7□□□□□ -1.34
VEGFB-202ENST00000426086 TEN1Q86WV5 123 aa6.7□□□□□ -1.34
VEGFB-202ENST00000426086 TRBV7-4A0A0J9YYF1 115 aa6.68□□□□□ -1.34
VEGFB-202ENST00000426086 FAM236DA0A1B0GTK5 79 aa6.68□□□□□ -1.34
VEGFB-202ENST00000426086 K7EP34 96 aa6.68□□□□□ -1.34
VEGFB-202ENST00000426086 FAM236CP0DP71 79 aa6.68□□□□□ -1.34
VEGFB-202ENST00000426086 MPLKIPQ8TAP9 179 aa6.67□□□□□ -1.34
VEGFB-202ENST00000426086 HRES1P13985 223 aa6.66□□□□□ -1.34
VEGFB-202ENST00000426086 PDE6GP18545 87 aa6.66□□□□□ -1.34
VEGFB-202ENST00000426086 GTF2H5Q6ZYL4 71 aa6.66□□□□□ -1.34
VEGFB-202ENST00000426086 DSCR8Q96T75 97 aa6.66□□□□□ -1.34
VEGFB-202ENST00000426086 A0A1W2PNM2 257 aa6.65□□□□□ -1.34
VEGFB-202ENST00000426086 A0A1B0GW54 56 aa6.64□□□□□ -1.35
VEGFB-202ENST00000426086 J3QR89 54 aa6.64□□□□□ -1.35
VEGFB-202ENST00000426086 LINC00846Q9NV44 126 aa6.64□□□□□ -1.35
VEGFB-202ENST00000426086 LOC110117498A0A087WWA1 95 aa6.63□□□□□ -1.35
VEGFB-202ENST00000426086 DSCR10P59022 87 aa6.63□□□□□ -1.35
VEGFB-202ENST00000426086 PRO0461Q9UI25 63 aa6.63□□□□□ -1.35
VEGFB-202ENST00000426086 F8W1H4 67 aa6.62□□□□□ -1.35
VEGFB-202ENST00000426086 SMCPP49901 116 aaPredicted RBP6.62□□□□□ -1.35
VEGFB-202ENST00000426086 SS18L2Q9UHA2 77 aa6.62□□□□□ -1.35
VEGFB-202ENST00000426086 CCKP06307 115 aa6.61□□□□□ -1.35
VEGFB-202ENST00000426086 Q6ZQT0 140 aa6.6□□□□□ -1.35
VEGFB-202ENST00000426086 A0A087WSZ3 146 aa6.58□□□□□ -1.36
VEGFB-202ENST00000426086 NOTCH2NLQ7Z3S9 236 aa6.58□□□□□ -1.36
VEGFB-202ENST00000426086 C14orf132Q9NPU4 83 aa6.57□□□□□ -1.36
VEGFB-202ENST00000426086 RBM12B-AS1Q9P1G2 102 aa6.57□□□□□ -1.36
VEGFB-202ENST00000426086 SIGMAR1Q99720 223 aa6.56□□□□□ -1.36
VEGFB-202ENST00000426086 LINC00472Q9H8W2 130 aa6.53□□□□□ -1.36
VEGFB-202ENST00000426086 Q8N9P0 234 aaPredicted RBP6.51□□□□□ -1.37
VEGFB-202ENST00000426086 ETDBQ3ZM63 59 aa6.49□□□□□ -1.37
VEGFB-202ENST00000426086 LINC00313P59037 77 aa6.48□□□□□ -1.37
VEGFB-202ENST00000426086 J3KT08 172 aa6.47□□□□□ -1.37
VEGFB-202ENST00000426086 NREPQ16612 68 aa6.46□□□□□ -1.38
VEGFB-202ENST00000426086 IGKV4-1P06312 121 aa6.45□□□□□ -1.38
VEGFB-202ENST00000426086 A8MWP4 228 aa6.42□□□□□ -1.38
VEGFB-202ENST00000426086 KRTAP20-1Q3LI63 56 aa6.42□□□□□ -1.38
VEGFB-202ENST00000426086 DEFB116Q30KQ4 102 aa6.41□□□□□ -1.38
VEGFB-202ENST00000426086 NEBP20929 6669 aa6.4□□□□□ -1.38
VEGFB-202ENST00000426086 C5orf47Q569G3 176 aa6.4□□□□□ -1.38
VEGFB-202ENST00000426086 NDUFB1O75438 58 aa6.39□□□□□ -1.39
VEGFB-202ENST00000426086 ACYP1P07311 99 aa6.39□□□□□ -1.39
VEGFB-202ENST00000426086 Q6ZVQ6 151 aa6.39□□□□□ -1.39
VEGFB-202ENST00000426086 A0A1B0GVX0 72 aa6.38□□□□□ -1.39
VEGFB-202ENST00000426086 UBL5Q9BZL1 73 aa6.38□□□□□ -1.39
VEGFB-202ENST00000426086 C8orf87E5RJ46 101 aa6.37□□□□□ -1.39
VEGFB-202ENST00000426086 SPINK7P58062 85 aa6.37□□□□□ -1.39
VEGFB-202ENST00000426086 FAM240AA0A1B0GVK7 77 aa6.36□□□□□ -1.39
VEGFB-202ENST00000426086 IGHV6-1A0A0B4J1U7 121 aa6.35□□□□□ -1.39
VEGFB-202ENST00000426086 BPY2O14599 106 aa6.35□□□□□ -1.39
VEGFB-202ENST00000426086 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
VEGFB-202ENST00000426086 IGKV3D-7A0A0C4DH55 119 aa6.34□□□□□ -1.39
VEGFB-202ENST00000426086 ANAPC13Q9BS18 74 aa6.34□□□□□ -1.39
VEGFB-202ENST00000426086 ZCCHC13Q8WW36 166 aaKnown RBP6.33□□□□□ -1.4
VEGFB-202ENST00000426086 MUC12Q9UKN1 5478 aa6.3□□□□□ -1.4
VEGFB-202ENST00000426086 WFDC13Q8IUB5 93 aa6.3□□□□□ -1.4
VEGFB-202ENST00000426086 C8orf17Q9NRJ1 99 aa6.3□□□□□ -1.4
VEGFB-202ENST00000426086 CXCL6P80162 114 aa6.29□□□□□ -1.4
VEGFB-202ENST00000426086 K7EQZ3 153 aa6.28□□□□□ -1.4
VEGFB-202ENST00000426086 MMP24-AS1A0A0U1RRL7 71 aa6.25□□□□□ -1.41
VEGFB-202ENST00000426086 A6NN06 94 aa6.25□□□□□ -1.41
VEGFB-202ENST00000426086 SMIM20Q8N5G0 67 aa6.25□□□□□ -1.41
VEGFB-202ENST00000426086 TMEM254Q8TBM7 123 aa6.24□□□□□ -1.41
VEGFB-202ENST00000426086 hDV103S1A0JD37 113 aa6.23□□□□□ -1.41
VEGFB-202ENST00000426086 MT1BP07438 61 aa6.23□□□□□ -1.41
VEGFB-202ENST00000426086 KRTAP5-9P26371 169 aa6.23□□□□□ -1.41
VEGFB-202ENST00000426086 ATP5EP2Q5VTU8 51 aa6.23□□□□□ -1.41
VEGFB-202ENST00000426086 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
VEGFB-202ENST00000426086 MRPL34Q9BQ48 92 aaKnown RBP6.23□□□□□ -1.41
VEGFB-202ENST00000426086 Q8N9L7 120 aa6.21□□□□□ -1.42
VEGFB-202ENST00000426086 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
VEGFB-202ENST00000426086 HCG22E2RYF7 251 aa6.18□□□□□ -1.42
VEGFB-202ENST00000426086 CASC2Q6XLA1 102 aa6.18□□□□□ -1.42
VEGFB-202ENST00000426086 H1FX-AS1Q4G0G2 97 aa6.17□□□□□ -1.42
VEGFB-202ENST00000426086 IMUPQ9GZP8 106 aa6.15□□□□□ -1.42
VEGFB-202ENST00000426086 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
VEGFB-202ENST00000426086 MT-ATP8P03928 68 aa6.12□□□□□ -1.43
VEGFB-202ENST00000426086 KRTAP2-3P0C7H8 128 aa6.12□□□□□ -1.43
VEGFB-202ENST00000426086 KRTAP2-4Q9BYR9 128 aa6.12□□□□□ -1.43
VEGFB-202ENST00000426086 NDUFS5O43920 106 aa6.1□□□□□ -1.43
VEGFB-202ENST00000426086 HIST1H4AP62805 103 aaKnown RBP6.1□□□□□ -1.43
VEGFB-202ENST00000426086 KRTAP19-8Q3LI54 63 aa6.1□□□□□ -1.43
VEGFB-202ENST00000426086 TP53AIP1Q9HCN2 124 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms