RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 C1orf195Q5TG92 126 aa5.9□□□□□ -1.46
MDC1-205ENST00000425072 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
MDC1-205ENST00000425072 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
MDC1-205ENST00000425072 DEFB116Q30KQ4 102 aa5.88□□□□□ -1.47
MDC1-205ENST00000425072 Q96NJ1 140 aa5.87□□□□□ -1.47
MDC1-205ENST00000425072 IMUPQ9GZP8 106 aa5.87□□□□□ -1.47
MDC1-205ENST00000425072 IGKV3D-7A0A0C4DH55 119 aa5.86□□□□□ -1.47
MDC1-205ENST00000425072 A8MWP4 228 aa5.86□□□□□ -1.47
MDC1-205ENST00000425072 LRP1Q07954 4544 aaKnown RBP5.84□□□□□ -1.47
MDC1-205ENST00000425072 DSCR10P59022 87 aa5.84□□□□□ -1.47
MDC1-205ENST00000425072 FP248Q71RG6 208 aaPredicted RBP5.84□□□□□ -1.47
MDC1-205ENST00000425072 PRR15Q8IV56 129 aa5.84□□□□□ -1.47
MDC1-205ENST00000425072 HIST1H4AP62805 103 aaKnown RBP5.83□□□□□ -1.48
MDC1-205ENST00000425072 FAT3Q8TDW7 4589 aa5.81□□□□□ -1.48
MDC1-205ENST00000425072 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
MDC1-205ENST00000425072 C8orf87E5RJ46 101 aa5.81□□□□□ -1.48
MDC1-205ENST00000425072 MT-ATP8P03928 68 aa5.81□□□□□ -1.48
MDC1-205ENST00000425072 XP32Q5T750 250 aa5.81□□□□□ -1.48
MDC1-205ENST00000425072 IGHV6-1A0A0B4J1U7 121 aa5.8□□□□□ -1.48
MDC1-205ENST00000425072 LINC00313P59037 77 aa5.8□□□□□ -1.48
MDC1-205ENST00000425072 K7EQZ3 153 aa5.79□□□□□ -1.48
MDC1-205ENST00000425072 RETNLBQ9BQ08 111 aa5.79□□□□□ -1.48
MDC1-205ENST00000425072 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
MDC1-205ENST00000425072 TNXBP22105 4242 aa5.78□□□□□ -1.48
MDC1-205ENST00000425072 PRR4Q16378 134 aa5.77□□□□□ -1.49
MDC1-205ENST00000425072 Q8N9L7 120 aa5.77□□□□□ -1.49
MDC1-205ENST00000425072 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
MDC1-205ENST00000425072 HCG22E2RYF7 251 aa5.75□□□□□ -1.49
MDC1-205ENST00000425072 hDV103S1A0JD37 113 aa5.74□□□□□ -1.49
MDC1-205ENST00000425072 CASC2Q6XLA1 102 aa5.74□□□□□ -1.49
MDC1-205ENST00000425072 SCGB1A1P11684 91 aa5.73□□□□□ -1.49
MDC1-205ENST00000425072 LRP2P98164 4655 aa5.72□□□□□ -1.49
MDC1-205ENST00000425072 A0A087WVE0 104 aa5.72□□□□□ -1.49
MDC1-205ENST00000425072 MMP24-AS1A0A0U1RRL7 71 aa5.72□□□□□ -1.49
MDC1-205ENST00000425072 TMEM254Q8TBM7 123 aa5.72□□□□□ -1.49
MDC1-205ENST00000425072 WFDC13Q8IUB5 93 aa5.71□□□□□ -1.5
MDC1-205ENST00000425072 MRPL34Q9BQ48 92 aaKnown RBP5.71□□□□□ -1.5
MDC1-205ENST00000425072 NOTCH2NLQ7Z3S9 236 aa5.7□□□□□ -1.5
MDC1-205ENST00000425072 C9orf92A6NGG3 77 aa5.69□□□□□ -1.5
MDC1-205ENST00000425072 SMIM20Q8N5G0 67 aa5.69□□□□□ -1.5
MDC1-205ENST00000425072 TPRXLQ17RH7 258 aa5.68□□□□□ -1.5
MDC1-205ENST00000425072 KRTAP13-3Q3SY46 172 aa5.68□□□□□ -1.5
MDC1-205ENST00000425072 TP53AIP1Q9HCN2 124 aa5.68□□□□□ -1.5
MDC1-205ENST00000425072 FAM236AA0A1B0GUQ0 79 aa5.67□□□□□ -1.5
MDC1-205ENST00000425072 FAM236BA0A1B0GV22 79 aa5.67□□□□□ -1.5
MDC1-205ENST00000425072 ATOX1O00244 68 aa5.66□□□□□ -1.5
MDC1-205ENST00000425072 NDUFS5O43920 106 aa5.66□□□□□ -1.5
MDC1-205ENST00000425072 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
MDC1-205ENST00000425072 KRTAP16-1A8MUX0 517 aa5.65□□□□□ -1.5
MDC1-205ENST00000425072 MUC2Q02817 5179 aa5.63□□□□□ -1.51
MDC1-205ENST00000425072 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
MDC1-205ENST00000425072 A8MUU9 505 aa5.63□□□□□ -1.51
MDC1-205ENST00000425072 UQCRQO14949 82 aa5.63□□□□□ -1.51
MDC1-205ENST00000425072 C20orf166-AS1Q96NR2 134 aa5.63□□□□□ -1.51
MDC1-205ENST00000425072 Q75L30 129 aa5.62□□□□□ -1.51
MDC1-205ENST00000425072 TRAV7A0A075B6U4 112 aa5.6□□□□□ -1.51
MDC1-205ENST00000425072 C5orf47Q569G3 176 aa5.6□□□□□ -1.51
MDC1-205ENST00000425072 ATP11AUNQ6ZP68 121 aa5.6□□□□□ -1.51
MDC1-205ENST00000425072 OCR1Q9BZK8 76 aa5.6□□□□□ -1.51
MDC1-205ENST00000425072 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
MDC1-205ENST00000425072 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
MDC1-205ENST00000425072 RPL37P61927 97 aaKnown RBP5.58□□□□□ -1.52
MDC1-205ENST00000425072 SERP2Q8N6R1 65 aa5.58□□□□□ -1.52
MDC1-205ENST00000425072 MP68P56378 58 aa5.57□□□□□ -1.52
MDC1-205ENST00000425072 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
MDC1-205ENST00000425072 ANAPC13Q9BS18 74 aa5.56□□□□□ -1.52
MDC1-205ENST00000425072 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
MDC1-205ENST00000425072 TRAV22A0A0B4J277 110 aa5.54□□□□□ -1.52
MDC1-205ENST00000425072 H3BPC8 53 aa5.54□□□□□ -1.52
MDC1-205ENST00000425072 H0Y9P7 68 aa5.52□□□□□ -1.53
MDC1-205ENST00000425072 COX7CP15954 63 aa5.52□□□□□ -1.53
MDC1-205ENST00000425072 Q5W150 140 aa5.52□□□□□ -1.53
MDC1-205ENST00000425072 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
MDC1-205ENST00000425072 C1orf64Q8NEQ6 169 aa5.5□□□□□ -1.53
MDC1-205ENST00000425072 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
MDC1-205ENST00000425072 LINC00208Q96KT6 92 aa5.49□□□□□ -1.53
MDC1-205ENST00000425072 LOC101927531A0A1B0GV80 90 aa5.48□□□□□ -1.53
MDC1-205ENST00000425072 PCOTHQ58A44 107 aa5.48□□□□□ -1.53
MDC1-205ENST00000425072 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
MDC1-205ENST00000425072 IGKV2-30P06310 120 aa5.45□□□□□ -1.54
MDC1-205ENST00000425072 CYP4F30PQ9H0H9 118 aa5.45□□□□□ -1.54
MDC1-205ENST00000425072 A0A0U1RQV1 116 aa5.44□□□□□ -1.54
MDC1-205ENST00000425072 SPINK7P58062 85 aa5.44□□□□□ -1.54
MDC1-205ENST00000425072 C7orf65Q6ZTY9 151 aa5.44□□□□□ -1.54
MDC1-205ENST00000425072 FSIP2Q5CZC0 6907 aa5.43□□□□□ -1.54
MDC1-205ENST00000425072 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
MDC1-205ENST00000425072 KLKP1Q107X0 134 aa5.43□□□□□ -1.54
MDC1-205ENST00000425072 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
MDC1-205ENST00000425072 NDUFC1O43677 76 aa5.42□□□□□ -1.54
MDC1-205ENST00000425072 PCP4P48539 62 aa5.42□□□□□ -1.54
MDC1-205ENST00000425072 LPAP08519 4548 aa5.42□□□□□ -1.54
MDC1-205ENST00000425072 SNURFQ9Y675 71 aa5.41□□□□□ -1.54
MDC1-205ENST00000425072 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
MDC1-205ENST00000425072 CCDC179H3BU77 68 aa5.39□□□□□ -1.55
MDC1-205ENST00000425072 HRES1P13985 223 aa5.33□□□□□ -1.56
MDC1-205ENST00000425072 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
MDC1-205ENST00000425072 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
MDC1-205ENST00000425072 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
MDC1-205ENST00000425072 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
MDC1-205ENST00000425072 H7BZZ5 65 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms