RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 LINC00483Q53H64 154 aa8.98□□□□□ -0.97
CALD1-206ENST00000424922 ATP11AUNQ6ZP68 121 aa8.98□□□□□ -0.97
CALD1-206ENST00000424922 CDK2AP2O75956 126 aa8.97□□□□□ -0.97
CALD1-206ENST00000424922 LCA10Q71F78 164 aa8.96□□□□□ -0.98
CALD1-206ENST00000424922 EPPK1P58107 5090 aaKnown RBP8.95□□□□□ -0.98
CALD1-206ENST00000424922 IGLV9-49A0A0B4J1Y8 123 aa8.94□□□□□ -0.98
CALD1-206ENST00000424922 HCG22E2RYF7 251 aa8.94□□□□□ -0.98
CALD1-206ENST00000424922 C7orf65Q6ZTY9 151 aa8.94□□□□□ -0.98
CALD1-206ENST00000424922 FAT1Q14517 4588 aa8.94□□□□□ -0.98
CALD1-206ENST00000424922 PSPHP1O15172 72 aa8.93□□□□□ -0.98
CALD1-206ENST00000424922 KRTAP10-4P60372 401 aaPredicted RBP8.93□□□□□ -0.98
CALD1-206ENST00000424922 A6NN06 94 aa8.92□□□□□ -0.98
CALD1-206ENST00000424922 LINC00472Q9H8W2 130 aa8.92□□□□□ -0.98
CALD1-206ENST00000424922 SPINK6Q6UWN8 80 aa8.91□□□□□ -0.98
CALD1-206ENST00000424922 C1orf64Q8NEQ6 169 aa8.9□□□□□ -0.98
CALD1-206ENST00000424922 FAM229AH3BQW9 127 aa8.9□□□□□ -0.99
CALD1-206ENST00000424922 DEFB116Q30KQ4 102 aa8.89□□□□□ -0.99
CALD1-206ENST00000424922 CYP4F30PQ9H0H9 118 aa8.89□□□□□ -0.99
CALD1-206ENST00000424922 HSPG2P98160 4391 aa8.89□□□□□ -0.99
CALD1-206ENST00000424922 PLA2G1BP04054 148 aaKnown RBP8.88□□□□□ -0.99
CALD1-206ENST00000424922 MOBPQ13875 183 aa8.88□□□□□ -0.99
CALD1-206ENST00000424922 Q5VV11 94 aa8.88□□□□□ -0.99
CALD1-206ENST00000424922 A8MWP4 228 aa8.87□□□□□ -0.99
CALD1-206ENST00000424922 KRTAP1-4P0C5Y4 121 aa8.87□□□□□ -0.99
CALD1-206ENST00000424922 Q5VSD8 79 aa8.86□□□□□ -0.99
CALD1-206ENST00000424922 PRR26Q8N8Z3 221 aa8.86□□□□□ -0.99
CALD1-206ENST00000424922 A0A087X002 238 aa8.86□□□□□ -0.99
CALD1-206ENST00000424922 A8MUN3 132 aa8.86□□□□□ -0.99
CALD1-206ENST00000424922 KRTAP29-1A8MX34 341 aaPredicted RBP8.86□□□□□ -0.99
CALD1-206ENST00000424922 RYR1P21817 5038 aa8.85□□□□□ -0.99
CALD1-206ENST00000424922 LIMD2Q9BT23 127 aa8.85□□□□□ -0.99
CALD1-206ENST00000424922 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
CALD1-206ENST00000424922 ZCCHC13Q8WW36 166 aaKnown RBP8.83□□□□□ -1
CALD1-206ENST00000424922 KRTAP17-1Q9BYP8 105 aa8.83□□□□□ -1
CALD1-206ENST00000424922 KRTAP13-2Q52LG2 175 aa8.82□□□□□ -1
CALD1-206ENST00000424922 WFDC13Q8IUB5 93 aa8.81□□□□□ -1
CALD1-206ENST00000424922 SPTSSBQ8NFR3 76 aa8.81□□□□□ -1
CALD1-206ENST00000424922 CASC2Q6XLA1 102 aa8.8□□□□□ -1
CALD1-206ENST00000424922 CHKB-CPT1BH3BT56 60 aa8.8□□□□□ -1
CALD1-206ENST00000424922 Q96NJ1 140 aa8.8□□□□□ -1
CALD1-206ENST00000424922 NDUFB1O75438 58 aa8.78□□□□□ -1
CALD1-206ENST00000424922 A8MU10 97 aa8.78□□□□□ -1
CALD1-206ENST00000424922 SSBP3-AS1Q7Z2R9 100 aa8.78□□□□□ -1
CALD1-206ENST00000424922 Q8N1X5 172 aa8.77□□□□□ -1.01
CALD1-206ENST00000424922 Q75L30 129 aa8.76□□□□□ -1.01
CALD1-206ENST00000424922 MMP24-AS1A0A0U1RRL7 71 aa8.75□□□□□ -1.01
CALD1-206ENST00000424922 CDC42SE1Q9NRR8 79 aa8.75□□□□□ -1.01
CALD1-206ENST00000424922 H3BPC8 53 aa8.74□□□□□ -1.01
CALD1-206ENST00000424922 MP68P56378 58 aa8.74□□□□□ -1.01
CALD1-206ENST00000424922 TYMSOSQ8TAI1 123 aa8.74□□□□□ -1.01
CALD1-206ENST00000424922 ASB16-AS1Q495Z4 193 aa8.72□□□□□ -1.01
CALD1-206ENST00000424922 PKHD1L1Q86WI1 4243 aa8.72□□□□□ -1.01
CALD1-206ENST00000424922 FLG2Q5D862 2391 aaPredicted RBP8.7□□□□□ -1.02
CALD1-206ENST00000424922 Q8N9P0 234 aaPredicted RBP8.7□□□□□ -1.02
CALD1-206ENST00000424922 LOC101927531A0A1B0GV80 90 aa8.69□□□□□ -1.02
CALD1-206ENST00000424922 A0A1B0GVX0 72 aa8.68□□□□□ -1.02
CALD1-206ENST00000424922 LINC01554Q52M75 96 aa8.68□□□□□ -1.02
CALD1-206ENST00000424922 C8orf17Q9NRJ1 99 aa8.68□□□□□ -1.02
CALD1-206ENST00000424922 A6NED7 52 aa8.68□□□□□ -1.02
CALD1-206ENST00000424922 H0Y9P7 68 aa8.68□□□□□ -1.02
CALD1-206ENST00000424922 PRR15LQ9BU68 103 aa8.67□□□□□ -1.02
CALD1-206ENST00000424922 LINC00208Q96KT6 92 aa8.66□□□□□ -1.02
CALD1-206ENST00000424922 TP53AIP1Q9HCN2 124 aa8.66□□□□□ -1.02
CALD1-206ENST00000424922 LINC00304Q8N9R0 145 aa8.63□□□□□ -1.03
CALD1-206ENST00000424922 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
CALD1-206ENST00000424922 KRTAP4-5Q9BYR2 181 aa8.62□□□□□ -1.03
CALD1-206ENST00000424922 IGHV6-1A0A0B4J1U7 121 aa8.61□□□□□ -1.03
CALD1-206ENST00000424922 LINC00313P59037 77 aa8.61□□□□□ -1.03
CALD1-206ENST00000424922 SPANXA2-OT1Q8N9U9 137 aa8.6□□□□□ -1.03
CALD1-206ENST00000424922 BIRC6Q9NR09 4857 aa8.6□□□□□ -1.03
CALD1-206ENST00000424922 SPINK1P00995 79 aa8.6□□□□□ -1.03
CALD1-206ENST00000424922 MRPL34Q9BQ48 92 aaKnown RBP8.59□□□□□ -1.03
CALD1-206ENST00000424922 SPAG11AQ6PDA7 123 aa8.58□□□□□ -1.04
CALD1-206ENST00000424922 KRTAP10-8P60410 259 aa8.57□□□□□ -1.04
CALD1-206ENST00000424922 MYCBP2O75592 4640 aa8.55□□□□□ -1.04
CALD1-206ENST00000424922 FAT3Q8TDW7 4589 aa8.53□□□□□ -1.04
CALD1-206ENST00000424922 TNXBP22105 4242 aa8.53□□□□□ -1.04
CALD1-206ENST00000424922 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
CALD1-206ENST00000424922 NOTCH2NLQ7Z3S9 236 aa8.53□□□□□ -1.04
CALD1-206ENST00000424922 DMBT1Q9UGM3 2413 aaPredicted RBP8.52□□□□□ -1.05
CALD1-206ENST00000424922 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
CALD1-206ENST00000424922 PRR4Q16378 134 aa8.49□□□□□ -1.05
CALD1-206ENST00000424922 HERC2O95714 4834 aa8.47□□□□□ -1.05
CALD1-206ENST00000424922 IGLV7-46A0A075B6I9 117 aa8.47□□□□□ -1.05
CALD1-206ENST00000424922 LINC01558Q9Y6Z2 57 aa8.47□□□□□ -1.05
CALD1-206ENST00000424922 ABCA13Q86UQ4 5058 aa8.44□□□□□ -1.06
CALD1-206ENST00000424922 KRTAP13-3Q3SY46 172 aa8.43□□□□□ -1.06
CALD1-206ENST00000424922 RETNLBQ9BQ08 111 aa8.42□□□□□ -1.06
CALD1-206ENST00000424922 PRAC1Q96KF2 57 aa8.41□□□□□ -1.06
CALD1-206ENST00000424922 PCOTHQ58A44 107 aa8.39□□□□□ -1.07
CALD1-206ENST00000424922 Q5W150 140 aa8.38□□□□□ -1.07
CALD1-206ENST00000424922 COA5Q86WW8 74 aa8.37□□□□□ -1.07
CALD1-206ENST00000424922 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
CALD1-206ENST00000424922 J3QL48 77 aa8.32□□□□□ -1.08
CALD1-206ENST00000424922 SPINK7P58062 85 aa8.31□□□□□ -1.08
CALD1-206ENST00000424922 C9orf92A6NGG3 77 aa8.26□□□□□ -1.09
CALD1-206ENST00000424922 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
CALD1-206ENST00000424922 IGKV2-30P06310 120 aa8.25□□□□□ -1.09
CALD1-206ENST00000424922 HRES1P13985 223 aa8.24□□□□□ -1.09
CALD1-206ENST00000424922 PCLOQ9Y6V0 5065 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms