RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 H0YAA0 97 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 SPINK13Q1W4C9 94 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 LELP1Q5T871 98 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 Q6ZRX8 168 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 SSBP3-AS1Q7Z2R9 100 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 DMAC1Q96GE9 116 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 CCL19Q99731 98 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 C10orf95Q9H7T3 257 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 DNAH7Q8WXX0 4024 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 NBASA2RRP1 2371 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 ANK3Q12955 4377 aaKnown RBP0.54□□□□□ -2.32
PMS1-210ENST00000424307 KMT2BQ9UMN6 2715 aaPredicted RBP0.54□□□□□ -2.32
PMS1-210ENST00000424307 MAP1BP46821 2468 aaKnown RBP0.54□□□□□ -2.32
PMS1-210ENST00000424307 NAV2Q8IVL1 2488 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 SPG11Q96JI7 2443 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 DNAH10Q8IVF4 4471 aa0.54□□□□□ -2.32
PMS1-210ENST00000424307 A0A1B0GU33 70 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 HTN1P15515 57 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 UNQ6190/PRO20217Q6UXQ8 127 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 DEFB105AQ8NG35 78 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 PSORS1C2Q9UIG4 136 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 CREBBPQ92793 2442 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 ZNF469Q96JG9 3925 aaPredicted RBP0.53□□□□□ -2.32
PMS1-210ENST00000424307 DNAH1Q9P2D7 4330 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 MEGF8Q7Z7M0 2845 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 TTC28Q96AY4 2481 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 UTP20O75691 2785 aaKnown RBP0.53□□□□□ -2.32
PMS1-210ENST00000424307 TEX15Q9BXT5 2789 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 MMP24-AS1A0A0U1RRL7 71 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 G3V318 75 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 K7EIL1 84 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 COX17Q14061 63 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 CLPSL2Q6UWE3 100 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 BRD3OSQ6XYD6 125 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 C6orf48Q9UBA6 75 aa0.53□□□□□ -2.32
PMS1-210ENST00000424307 CACNA1HO95180 2353 aa0.53□□□□□ -2.33
PMS1-210ENST00000424307 F8P00451 2351 aa0.53□□□□□ -2.33
PMS1-210ENST00000424307 RIF1Q5UIP0 2472 aaKnown RBP0.53□□□□□ -2.33
PMS1-210ENST00000424307 KLK9Q2XQG4 91 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 MINOS1Q5TGZ0 78 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 Q6ZSA8 131 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 C5orf56Q8N8D9 126 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 MYCBP2O75592 4640 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 KMT2AQ03164 3969 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 COL7A1Q02388 2944 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 CCDC168Q8NDH2 2452 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 SPTY2D1-AS1A0A0U1RR47 76 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 LYNX1G3V0Z9 82 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 ACYP2P14621 99 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 DEFB136Q30KP8 78 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 DEFB133Q30KQ1 61 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 SPACA4Q8TDM5 124 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 RHPN1-AS1Q9BWJ2 59 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 NCOR2Q9Y618 2525 aa0.52□□□□□ -2.33
PMS1-210ENST00000424307 DNAH17Q9UFH2 4485 aa0.51□□□□□ -2.33
PMS1-210ENST00000424307 EP300Q09472 2414 aaPredicted RBP0.51□□□□□ -2.33
PMS1-210ENST00000424307 PTPN13Q12923 2485 aa0.51□□□□□ -2.33
PMS1-210ENST00000424307 LYNX1P0DP58 116 aa0.51□□□□□ -2.33
PMS1-210ENST00000424307 DEFB132Q7Z7B7 95 aa0.51□□□□□ -2.33
PMS1-210ENST00000424307 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
PMS1-210ENST00000424307 ABCA2Q9BZC7 2435 aa0.51□□□□□ -2.33
PMS1-210ENST00000424307 CMYA5Q8N3K9 4069 aa0.51□□□□□ -2.33
PMS1-210ENST00000424307 NIPBLQ6KC79 2804 aaeCLIP0.51□□□□□ -2.33
PMS1-210ENST00000424307 CEP290O15078 2479 aa0.51□□□□□ -2.33
PMS1-210ENST00000424307 SPTAN1Q13813 2472 aaKnown RBP0.51□□□□□ -2.33
PMS1-210ENST00000424307 DNAH9Q9NYC9 4486 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 HRNRQ86YZ3 2850 aaPredicted RBP0.5□□□□□ -2.33
PMS1-210ENST00000424307 LY6G6CO95867 125 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 DEFB109BQ30KR1 87 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 DEFB119Q8N690 84 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 TP53AIP1Q9HCN2 124 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 Q9Y3F1 56 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 ZNF462Q96JM2 2506 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 SONP18583 2426 aaKnown RBP0.5□□□□□ -2.33
PMS1-210ENST00000424307 DMBT1Q9UGM3 2413 aaPredicted RBP0.5□□□□□ -2.33
PMS1-210ENST00000424307 BAHCC1Q9P281 2608 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 JMJD1CQ15652 2540 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 PKD1L1Q8TDX9 2849 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 DNAH2Q9P225 4427 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 DNAH6Q9C0G6 4158 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 A0A096LPF7 62 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 DEFB130BP0DP73 79 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 DEFB130AP0DP74 79 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 DEFB131AP59861 70 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 DEFB103AP81534 67 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 C10orf99Q6UWK7 81 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 NBEAL2Q6ZNJ1 2754 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 MRPL34Q9BQ48 92 aaKnown RBP0.5□□□□□ -2.33
PMS1-210ENST00000424307 PRO2289Q9P1D8 64 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 MXRA5Q9NR99 2828 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 FAM208BQ5VWN6 2430 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 FBN2P35556 2912 aa0.5□□□□□ -2.33
PMS1-210ENST00000424307 HUWE1Q7Z6Z7 4374 aaKnown RBP0.5□□□□□ -2.33
PMS1-210ENST00000424307 ABCA12Q86UK0 2595 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 USP9XQ93008 2570 aaPredicted RBP0.49□□□□□ -2.33
PMS1-210ENST00000424307 HIVEP3Q5T1R4 2406 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 HECTD4Q9Y4D8 3996 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 GVQW2A0A096LPI5 108 aaPredicted RBP0.49□□□□□ -2.33
PMS1-210ENST00000424307 SPINK1P00995 79 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 SPRR1AP35321 89 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 222.3 ms