RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 A0A1B0GVX0 72 aa12.01□□□□□ -0.49
ABCF3-202ENST00000421340 IGLV7-46A0A075B6I9 117 aa11.98□□□□□ -0.49
ABCF3-202ENST00000421340 K7EQZ3 153 aa11.98□□□□□ -0.49
ABCF3-202ENST00000421340 PRR4Q16378 134 aa11.96□□□□□ -0.49
ABCF3-202ENST00000421340 IGHV6-1A0A0B4J1U7 121 aa11.95□□□□□ -0.5
ABCF3-202ENST00000421340 C8orf87E5RJ46 101 aa11.95□□□□□ -0.5
ABCF3-202ENST00000421340 Q8N9L7 120 aa11.95□□□□□ -0.5
ABCF3-202ENST00000421340 IMUPQ9GZP8 106 aa11.95□□□□□ -0.5
ABCF3-202ENST00000421340 MT-ATP8P03928 68 aa11.94□□□□□ -0.5
ABCF3-202ENST00000421340 LINC00313P59037 77 aa11.91□□□□□ -0.5
ABCF3-202ENST00000421340 C8orf17Q9NRJ1 99 aa11.9□□□□□ -0.5
ABCF3-202ENST00000421340 HIST1H4AP62805 103 aaKnown RBP11.89□□□□□ -0.51
ABCF3-202ENST00000421340 TPRXLQ17RH7 258 aa11.87□□□□□ -0.51
ABCF3-202ENST00000421340 KRTAP13-3Q3SY46 172 aa11.87□□□□□ -0.51
ABCF3-202ENST00000421340 NOTCH2NLQ7Z3S9 236 aa11.86□□□□□ -0.51
ABCF3-202ENST00000421340 MMP24-AS1A0A0U1RRL7 71 aa11.85□□□□□ -0.51
ABCF3-202ENST00000421340 HCG22E2RYF7 251 aa11.83□□□□□ -0.52
ABCF3-202ENST00000421340 hDV103S1A0JD37 113 aa11.81□□□□□ -0.52
ABCF3-202ENST00000421340 C9orf92A6NGG3 77 aa11.8□□□□□ -0.52
ABCF3-202ENST00000421340 CASC2Q6XLA1 102 aa11.8□□□□□ -0.52
ABCF3-202ENST00000421340 TMEM254Q8TBM7 123 aa11.8□□□□□ -0.52
ABCF3-202ENST00000421340 A0A087WVE0 104 aa11.79□□□□□ -0.52
ABCF3-202ENST00000421340 KRTAP16-1A8MUX0 517 aa11.79□□□□□ -0.52
ABCF3-202ENST00000421340 WFDC13Q8IUB5 93 aa11.75□□□□□ -0.53
ABCF3-202ENST00000421340 MRPL34Q9BQ48 92 aaKnown RBP11.75□□□□□ -0.53
ABCF3-202ENST00000421340 Q8N9P0 234 aaPredicted RBP11.72□□□□□ -0.53
ABCF3-202ENST00000421340 C20orf166-AS1Q96NR2 134 aa11.72□□□□□ -0.53
ABCF3-202ENST00000421340 HERC1Q15751 4861 aa11.7□□□□□ -0.54
ABCF3-202ENST00000421340 XP32Q5T750 250 aa11.7□□□□□ -0.54
ABCF3-202ENST00000421340 A8MUU9 505 aa11.69□□□□□ -0.54
ABCF3-202ENST00000421340 Q75L30 129 aa11.67□□□□□ -0.54
ABCF3-202ENST00000421340 FAM236AA0A1B0GUQ0 79 aa11.62□□□□□ -0.55
ABCF3-202ENST00000421340 FAM236BA0A1B0GV22 79 aa11.62□□□□□ -0.55
ABCF3-202ENST00000421340 RPL37P61927 97 aaKnown RBP11.61□□□□□ -0.55
ABCF3-202ENST00000421340 TP53AIP1Q9HCN2 124 aa11.61□□□□□ -0.55
ABCF3-202ENST00000421340 SCGB1A1P11684 91 aa11.6□□□□□ -0.55
ABCF3-202ENST00000421340 NDUFS5O43920 106 aa11.59□□□□□ -0.55
ABCF3-202ENST00000421340 HMCN2Q8NDA2 5059 aa11.58□□□□□ -0.56
ABCF3-202ENST00000421340 SMIM20Q8N5G0 67 aa11.54□□□□□ -0.56
ABCF3-202ENST00000421340 ATOX1O00244 68 aa11.53□□□□□ -0.56
ABCF3-202ENST00000421340 OCR1Q9BZK8 76 aa11.53□□□□□ -0.56
ABCF3-202ENST00000421340 UQCRQO14949 82 aa11.52□□□□□ -0.57
ABCF3-202ENST00000421340 ATP11AUNQ6ZP68 121 aa11.52□□□□□ -0.57
ABCF3-202ENST00000421340 ZCCHC13Q8WW36 166 aaKnown RBP11.5□□□□□ -0.57
ABCF3-202ENST00000421340 LPAP08519 4548 aa11.5□□□□□ -0.57
ABCF3-202ENST00000421340 SEC61BP60468 96 aaKnown RBP11.47□□□□□ -0.57
ABCF3-202ENST00000421340 TRAV7A0A075B6U4 112 aa11.45□□□□□ -0.58
ABCF3-202ENST00000421340 Q5W150 140 aa11.44□□□□□ -0.58
ABCF3-202ENST00000421340 C5orf47Q569G3 176 aa11.41□□□□□ -0.58
ABCF3-202ENST00000421340 LRP2P98164 4655 aa11.4□□□□□ -0.58
ABCF3-202ENST00000421340 PCOTHQ58A44 107 aa11.4□□□□□ -0.58
ABCF3-202ENST00000421340 TRAV22A0A0B4J277 110 aa11.39□□□□□ -0.59
ABCF3-202ENST00000421340 SERP2Q8N6R1 65 aa11.38□□□□□ -0.59
ABCF3-202ENST00000421340 H0Y9P7 68 aa11.33□□□□□ -0.6
ABCF3-202ENST00000421340 MP68P56378 58 aa11.33□□□□□ -0.6
ABCF3-202ENST00000421340 H3BPC8 53 aa11.32□□□□□ -0.6
ABCF3-202ENST00000421340 MUC17Q685J3 4493 aa11.3□□□□□ -0.6
ABCF3-202ENST00000421340 ANAPC13Q9BS18 74 aa11.29□□□□□ -0.6
ABCF3-202ENST00000421340 LOC101927531A0A1B0GV80 90 aa11.27□□□□□ -0.61
ABCF3-202ENST00000421340 COX7CP15954 63 aa11.26□□□□□ -0.61
ABCF3-202ENST00000421340 IGKV2-30P06310 120 aa11.25□□□□□ -0.61
ABCF3-202ENST00000421340 SPINK7P58062 85 aa11.24□□□□□ -0.61
ABCF3-202ENST00000421340 C1orf64Q8NEQ6 169 aa11.24□□□□□ -0.61
ABCF3-202ENST00000421340 LINC00208Q96KT6 92 aa11.24□□□□□ -0.61
ABCF3-202ENST00000421340 C7orf65Q6ZTY9 151 aa11.22□□□□□ -0.61
ABCF3-202ENST00000421340 IGKV2D-30A0A075B6S6 120 aa11.2□□□□□ -0.62
ABCF3-202ENST00000421340 CYP4F30PQ9H0H9 118 aa11.2□□□□□ -0.62
ABCF3-202ENST00000421340 A0A0U1RQV1 116 aa11.19□□□□□ -0.62
ABCF3-202ENST00000421340 KRTAP4-1Q9BYQ7 146 aa11.15□□□□□ -0.62
ABCF3-202ENST00000421340 C20orf197Q8N268 126 aa11.14□□□□□ -0.63
ABCF3-202ENST00000421340 KLKP1Q107X0 134 aa11.12□□□□□ -0.63
ABCF3-202ENST00000421340 HRES1P13985 223 aa11.07□□□□□ -0.64
ABCF3-202ENST00000421340 SNURFQ9Y675 71 aa11.07□□□□□ -0.64
ABCF3-202ENST00000421340 UBR4Q5T4S7 5183 aa11.05□□□□□ -0.64
ABCF3-202ENST00000421340 CCDC179H3BU77 68 aa11.02□□□□□ -0.65
ABCF3-202ENST00000421340 MPLKIPQ8TAP9 179 aa11.02□□□□□ -0.65
ABCF3-202ENST00000421340 NDUFC1O43677 76 aa11□□□□□ -0.65
ABCF3-202ENST00000421340 RBM12B-AS1Q9P1G2 102 aa10.96□□□□□ -0.65
ABCF3-202ENST00000421340 PCP4P48539 62 aa10.93□□□□□ -0.66
ABCF3-202ENST00000421340 C4orf26Q17RF5 130 aa10.93□□□□□ -0.66
ABCF3-202ENST00000421340 COX6B2Q6YFQ2 88 aa10.92□□□□□ -0.66
ABCF3-202ENST00000421340 RNF213Q63HN8 5207 aa10.92□□□□□ -0.66
ABCF3-202ENST00000421340 H7BZZ5 65 aa10.89□□□□□ -0.67
ABCF3-202ENST00000421340 SPANXA2-OT1Q8N9U9 137 aa10.89□□□□□ -0.67
ABCF3-202ENST00000421340 CYSTM1Q9H1C7 97 aa10.89□□□□□ -0.67
ABCF3-202ENST00000421340 MUC2Q02817 5179 aa10.86□□□□□ -0.67
ABCF3-202ENST00000421340 KRTAP19-2Q3LHN2 52 aa10.85□□□□□ -0.67
ABCF3-202ENST00000421340 A8MUN3 132 aa10.82□□□□□ -0.68
ABCF3-202ENST00000421340 KRTAP3-1Q9BYR8 98 aa10.82□□□□□ -0.68
ABCF3-202ENST00000421340 FAM236DA0A1B0GTK5 79 aa10.81□□□□□ -0.68
ABCF3-202ENST00000421340 FAM236CP0DP71 79 aa10.81□□□□□ -0.68
ABCF3-202ENST00000421340 DMAC1Q96GE9 116 aa10.78□□□□□ -0.68
ABCF3-202ENST00000421340 H1FX-AS1Q4G0G2 97 aa10.76□□□□□ -0.69
ABCF3-202ENST00000421340 LCE2CQ5TA81 110 aa10.72□□□□□ -0.69
ABCF3-202ENST00000421340 TMEM258P61165 79 aa10.7□□□□□ -0.7
ABCF3-202ENST00000421340 ACYP2P14621 99 aa10.69□□□□□ -0.7
ABCF3-202ENST00000421340 ATP5EP56381 51 aaPredicted RBP10.68□□□□□ -0.7
ABCF3-202ENST00000421340 S4R3F8 94 aa10.56□□□□□ -0.72
ABCF3-202ENST00000421340 FLGP20930 4061 aaPredicted RBP10.53□□□□□ -0.72
ABCF3-202ENST00000421340 FAT4Q6V0I7 4981 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms