RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 PRR4Q16378 134 aa9□□□□□ -0.97
LRCH3-202ENST00000414675 H3BPC8 53 aa8.99□□□□□ -0.97
LRCH3-202ENST00000414675 SSBP3-AS1Q7Z2R9 100 aa8.99□□□□□ -0.97
LRCH3-202ENST00000414675 C1orf64Q8NEQ6 169 aa8.99□□□□□ -0.97
LRCH3-202ENST00000414675 A0A1B0GVX0 72 aa8.97□□□□□ -0.97
LRCH3-202ENST00000414675 KRTAP1-4P0C5Y4 121 aa8.97□□□□□ -0.97
LRCH3-202ENST00000414675 C8orf17Q9NRJ1 99 aa8.97□□□□□ -0.97
LRCH3-202ENST00000414675 IGHV6-1A0A0B4J1U7 121 aa8.97□□□□□ -0.97
LRCH3-202ENST00000414675 ASB16-AS1Q495Z4 193 aa8.97□□□□□ -0.97
LRCH3-202ENST00000414675 CD164Q04900 197 aa8.96□□□□□ -0.97
LRCH3-202ENST00000414675 CYP4F30PQ9H0H9 118 aa8.96□□□□□ -0.97
LRCH3-202ENST00000414675 CDK2AP2O75956 126 aa8.96□□□□□ -0.98
LRCH3-202ENST00000414675 NOTCH2NLQ7Z3S9 236 aa8.96□□□□□ -0.98
LRCH3-202ENST00000414675 SPINK6Q6UWN8 80 aa8.95□□□□□ -0.98
LRCH3-202ENST00000414675 RYR3Q15413 4870 aa8.94□□□□□ -0.98
LRCH3-202ENST00000414675 A0A1B0GVY2 172 aa8.93□□□□□ -0.98
LRCH3-202ENST00000414675 LINC00336Q6ZUF6 198 aa8.93□□□□□ -0.98
LRCH3-202ENST00000414675 APOBP04114 4563 aaKnown RBP8.92□□□□□ -0.98
LRCH3-202ENST00000414675 TP53AIP1Q9HCN2 124 aa8.9□□□□□ -0.98
LRCH3-202ENST00000414675 NDUFS5O43920 106 aa8.89□□□□□ -0.99
LRCH3-202ENST00000414675 SPANXA2-OT1Q8N9U9 137 aa8.89□□□□□ -0.99
LRCH3-202ENST00000414675 FAT1Q14517 4588 aa8.88□□□□□ -0.99
LRCH3-202ENST00000414675 SMR3BP02814 79 aaPredicted RBP8.87□□□□□ -0.99
LRCH3-202ENST00000414675 PLA2G1BP04054 148 aaKnown RBP8.85□□□□□ -0.99
LRCH3-202ENST00000414675 MRPL34Q9BQ48 92 aaKnown RBP8.85□□□□□ -0.99
LRCH3-202ENST00000414675 C1orf195Q5TG92 126 aa8.83□□□□□ -1
LRCH3-202ENST00000414675 Q1T7F1 81 aa8.83□□□□□ -1
LRCH3-202ENST00000414675 PRO0628Q9UI54 55 aa8.83□□□□□ -1
LRCH3-202ENST00000414675 PCOTHQ58A44 107 aa8.81□□□□□ -1
LRCH3-202ENST00000414675 BRK1Q8WUW1 75 aa8.81□□□□□ -1
LRCH3-202ENST00000414675 TYMSOSQ8TAI1 123 aa8.8□□□□□ -1
LRCH3-202ENST00000414675 KRTAP10-4P60372 401 aaPredicted RBP8.78□□□□□ -1
LRCH3-202ENST00000414675 PRR26Q8N8Z3 221 aa8.77□□□□□ -1.01
LRCH3-202ENST00000414675 IGLV7-46A0A075B6I9 117 aa8.77□□□□□ -1.01
LRCH3-202ENST00000414675 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
LRCH3-202ENST00000414675 V9GYY9 64 aa8.75□□□□□ -1.01
LRCH3-202ENST00000414675 PSPHP1O15172 72 aa8.75□□□□□ -1.01
LRCH3-202ENST00000414675 LIMD2Q9BT23 127 aa8.74□□□□□ -1.01
LRCH3-202ENST00000414675 Q5W150 140 aa8.74□□□□□ -1.01
LRCH3-202ENST00000414675 LINC00313P59037 77 aa8.73□□□□□ -1.01
LRCH3-202ENST00000414675 C4orf48Q5BLP8 95 aa8.73□□□□□ -1.01
LRCH3-202ENST00000414675 PKHD1L1Q86WI1 4243 aa8.72□□□□□ -1.01
LRCH3-202ENST00000414675 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.01
LRCH3-202ENST00000414675 COA5Q86WW8 74 aa8.71□□□□□ -1.01
LRCH3-202ENST00000414675 SPINK1P00995 79 aa8.7□□□□□ -1.02
LRCH3-202ENST00000414675 LINC00304Q8N9R0 145 aa8.69□□□□□ -1.02
LRCH3-202ENST00000414675 KRTAP16-1A8MUX0 517 aa8.68□□□□□ -1.02
LRCH3-202ENST00000414675 LOC101927531A0A1B0GV80 90 aa8.68□□□□□ -1.02
LRCH3-202ENST00000414675 A8MUN3 132 aa8.67□□□□□ -1.02
LRCH3-202ENST00000414675 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
LRCH3-202ENST00000414675 RETNLBQ9BQ08 111 aa8.63□□□□□ -1.03
LRCH3-202ENST00000414675 EPPK1P58107 5090 aaKnown RBP8.62□□□□□ -1.03
LRCH3-202ENST00000414675 PRR15LQ9BU68 103 aa8.61□□□□□ -1.03
LRCH3-202ENST00000414675 RPS29P62273 56 aaKnown RBP8.61□□□□□ -1.03
LRCH3-202ENST00000414675 SPAG11AQ6PDA7 123 aa8.6□□□□□ -1.03
LRCH3-202ENST00000414675 HSPG2P98160 4391 aa8.6□□□□□ -1.03
LRCH3-202ENST00000414675 Q5VV11 94 aa8.6□□□□□ -1.03
LRCH3-202ENST00000414675 HRES1P13985 223 aa8.58□□□□□ -1.04
LRCH3-202ENST00000414675 FAM229AH3BQW9 127 aa8.57□□□□□ -1.04
LRCH3-202ENST00000414675 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
LRCH3-202ENST00000414675 RYR1P21817 5038 aa8.56□□□□□ -1.04
LRCH3-202ENST00000414675 LRP1Q07954 4544 aaKnown RBP8.54□□□□□ -1.04
LRCH3-202ENST00000414675 KIAA1109Q2LD37 5005 aa8.52□□□□□ -1.05
LRCH3-202ENST00000414675 IGKV2-30P06310 120 aa8.51□□□□□ -1.05
LRCH3-202ENST00000414675 TNXBP22105 4242 aa8.5□□□□□ -1.05
LRCH3-202ENST00000414675 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
LRCH3-202ENST00000414675 Q75L30 129 aa8.5□□□□□ -1.05
LRCH3-202ENST00000414675 LINC01558Q9Y6Z2 57 aa8.49□□□□□ -1.05
LRCH3-202ENST00000414675 ACYP2P14621 99 aa8.49□□□□□ -1.05
LRCH3-202ENST00000414675 KRTAP17-1Q9BYP8 105 aa8.49□□□□□ -1.05
LRCH3-202ENST00000414675 Q5VSD8 79 aa8.47□□□□□ -1.05
LRCH3-202ENST00000414675 A6NED7 52 aa8.46□□□□□ -1.06
LRCH3-202ENST00000414675 C9orf92A6NGG3 77 aa8.45□□□□□ -1.06
LRCH3-202ENST00000414675 FAT3Q8TDW7 4589 aa8.44□□□□□ -1.06
LRCH3-202ENST00000414675 Q8N1X5 172 aa8.43□□□□□ -1.06
LRCH3-202ENST00000414675 IGKV2D-30A0A075B6S6 120 aa8.43□□□□□ -1.06
LRCH3-202ENST00000414675 DMAC1Q96GE9 116 aa8.43□□□□□ -1.06
LRCH3-202ENST00000414675 A8MU10 97 aa8.42□□□□□ -1.06
LRCH3-202ENST00000414675 KRTAP10-8P60410 259 aa8.4□□□□□ -1.07
LRCH3-202ENST00000414675 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
LRCH3-202ENST00000414675 A8MUU9 505 aa8.36□□□□□ -1.07
LRCH3-202ENST00000414675 LCA10Q71F78 164 aa8.36□□□□□ -1.07
LRCH3-202ENST00000414675 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-202ENST00000414675 SPTSSBQ8NFR3 76 aa8.33□□□□□ -1.08
LRCH3-202ENST00000414675 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
LRCH3-202ENST00000414675 PMAIP1Q13794 54 aa8.32□□□□□ -1.08
LRCH3-202ENST00000414675 MYCBP2O75592 4640 aa8.32□□□□□ -1.08
LRCH3-202ENST00000414675 SPINK7P58062 85 aa8.31□□□□□ -1.08
LRCH3-202ENST00000414675 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
LRCH3-202ENST00000414675 ATP11AUNQ6ZP68 121 aa8.29□□□□□ -1.08
LRCH3-202ENST00000414675 A0A1B0GU69 56 aa8.24□□□□□ -1.09
LRCH3-202ENST00000414675 MT1HL1P0DM35 61 aa8.24□□□□□ -1.09
LRCH3-202ENST00000414675 BIRC6Q9NR09 4857 aa8.22□□□□□ -1.09
LRCH3-202ENST00000414675 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
LRCH3-202ENST00000414675 A6NN06 94 aa8.14□□□□□ -1.11
LRCH3-202ENST00000414675 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
LRCH3-202ENST00000414675 HERC2O95714 4834 aa8.13□□□□□ -1.11
LRCH3-202ENST00000414675 KRTAP3-1Q9BYR8 98 aa8.12□□□□□ -1.11
LRCH3-202ENST00000414675 XP32Q5T750 250 aa8.11□□□□□ -1.11
LRCH3-202ENST00000414675 KTN1-AS1Q86SY8 53 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms