RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 C20orf166-AS1Q96NR2 134 aa3.41□□□□□ -1.86
USP54-202ENST00000413442 LINC00472Q9H8W2 130 aa3.41□□□□□ -1.86
USP54-202ENST00000413442 LOC110117498A0A087WWA1 95 aa3.4□□□□□ -1.87
USP54-202ENST00000413442 A8MUU9 505 aa3.4□□□□□ -1.87
USP54-202ENST00000413442 C8orf87E5RJ46 101 aa3.4□□□□□ -1.87
USP54-202ENST00000413442 IGKV4-1P06312 121 aa3.4□□□□□ -1.87
USP54-202ENST00000413442 NDUFB1O75438 58 aa3.39□□□□□ -1.87
USP54-202ENST00000413442 Q6ZQT0 140 aa3.39□□□□□ -1.87
USP54-202ENST00000413442 KRTAP4-1Q9BYQ7 146 aa3.39□□□□□ -1.87
USP54-202ENST00000413442 C9orf118A6NHY6 69 aa3.37□□□□□ -1.87
USP54-202ENST00000413442 H3BT86 120 aa3.37□□□□□ -1.87
USP54-202ENST00000413442 SIGMAR1Q99720 223 aa3.37□□□□□ -1.87
USP54-202ENST00000413442 A0A1B0GVX0 72 aa3.36□□□□□ -1.87
USP54-202ENST00000413442 PCP4L1A6NKN8 68 aa3.36□□□□□ -1.87
USP54-202ENST00000413442 VPS25Q9BRG1 176 aa3.36□□□□□ -1.87
USP54-202ENST00000413442 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
USP54-202ENST00000413442 FAT4Q6V0I7 4981 aa3.35□□□□□ -1.87
USP54-202ENST00000413442 NREPQ16612 68 aa3.35□□□□□ -1.87
USP54-202ENST00000413442 A0A1W2PPM0 123 aa3.34□□□□□ -1.87
USP54-202ENST00000413442 COX6B2Q6YFQ2 88 aa3.34□□□□□ -1.87
USP54-202ENST00000413442 IGHV6-1A0A0B4J1U7 121 aa3.33□□□□□ -1.88
USP54-202ENST00000413442 KRTAP16-1A8MUX0 517 aa3.33□□□□□ -1.88
USP54-202ENST00000413442 A8MWP4 228 aa3.33□□□□□ -1.88
USP54-202ENST00000413442 DSCR10P59022 87 aa3.33□□□□□ -1.88
USP54-202ENST00000413442 BATFQ16520 125 aa3.33□□□□□ -1.88
USP54-202ENST00000413442 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
USP54-202ENST00000413442 TAX1BP3O14907 124 aa3.32□□□□□ -1.88
USP54-202ENST00000413442 COL5A1-AS1Q5SY13 56 aa3.32□□□□□ -1.88
USP54-202ENST00000413442 MTURNQ8N3F0 131 aa3.32□□□□□ -1.88
USP54-202ENST00000413442 Q8N9P0 234 aaPredicted RBP3.32□□□□□ -1.88
USP54-202ENST00000413442 A0A1B0GV72 72 aa3.31□□□□□ -1.88
USP54-202ENST00000413442 MT1HP80294 61 aa3.31□□□□□ -1.88
USP54-202ENST00000413442 DEFB116Q30KQ4 102 aa3.31□□□□□ -1.88
USP54-202ENST00000413442 NAA38Q9BRA0 125 aaKnown RBP3.31□□□□□ -1.88
USP54-202ENST00000413442 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
USP54-202ENST00000413442 C14orf132Q9NPU4 83 aa3.31□□□□□ -1.88
USP54-202ENST00000413442 RBM12B-AS1Q9P1G2 102 aa3.31□□□□□ -1.88
USP54-202ENST00000413442 M0R2T5 61 aa3.29□□□□□ -1.88
USP54-202ENST00000413442 PRR15Q8IV56 129 aa3.29□□□□□ -1.88
USP54-202ENST00000413442 C8orf17Q9NRJ1 99 aa3.29□□□□□ -1.88
USP54-202ENST00000413442 SPCS1Q9Y6A9 102 aa3.29□□□□□ -1.88
USP54-202ENST00000413442 Q6ZVQ6 151 aa3.28□□□□□ -1.88
USP54-202ENST00000413442 GTF2H5Q6ZYL4 71 aa3.28□□□□□ -1.88
USP54-202ENST00000413442 NOTCH2NLQ7Z3S9 236 aa3.28□□□□□ -1.88
USP54-202ENST00000413442 ZCCHC13Q8WW36 166 aaKnown RBP3.28□□□□□ -1.88
USP54-202ENST00000413442 IGKV3D-7A0A0C4DH55 119 aa3.27□□□□□ -1.89
USP54-202ENST00000413442 F8W1H4 67 aa3.27□□□□□ -1.89
USP54-202ENST00000413442 BPY2O14599 106 aa3.27□□□□□ -1.89
USP54-202ENST00000413442 WFDC13Q8IUB5 93 aa3.27□□□□□ -1.89
USP54-202ENST00000413442 TMEM254Q8TBM7 123 aa3.27□□□□□ -1.89
USP54-202ENST00000413442 MPLKIPQ8TAP9 179 aa3.26□□□□□ -1.89
USP54-202ENST00000413442 MRPL34Q9BQ48 92 aaKnown RBP3.26□□□□□ -1.89
USP54-202ENST00000413442 KRTAP10-6P60371 365 aaPredicted RBP3.25□□□□□ -1.89
USP54-202ENST00000413442 UBL5Q9BZL1 73 aa3.25□□□□□ -1.89
USP54-202ENST00000413442 FAM236DA0A1B0GTK5 79 aa3.24□□□□□ -1.89
USP54-202ENST00000413442 hDV103S1A0JD37 113 aa3.24□□□□□ -1.89
USP54-202ENST00000413442 K7EP34 96 aa3.24□□□□□ -1.89
USP54-202ENST00000413442 FAM236CP0DP71 79 aa3.24□□□□□ -1.89
USP54-202ENST00000413442 SPINK7P58062 85 aa3.24□□□□□ -1.89
USP54-202ENST00000413442 HRES1P13985 223 aa3.23□□□□□ -1.89
USP54-202ENST00000413442 MMP24-AS1A0A0U1RRL7 71 aa3.22□□□□□ -1.89
USP54-202ENST00000413442 ACYP1P07311 99 aa3.22□□□□□ -1.89
USP54-202ENST00000413442 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
USP54-202ENST00000413442 PRO0461Q9UI25 63 aa3.22□□□□□ -1.89
USP54-202ENST00000413442 K7EQZ3 153 aa3.21□□□□□ -1.9
USP54-202ENST00000413442 CXCL6P80162 114 aa3.21□□□□□ -1.9
USP54-202ENST00000413442 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
USP54-202ENST00000413442 A0A1B0GV90 55 aa3.2□□□□□ -1.9
USP54-202ENST00000413442 CASC2Q6XLA1 102 aa3.2□□□□□ -1.9
USP54-202ENST00000413442 TP53AIP1Q9HCN2 124 aa3.2□□□□□ -1.9
USP54-202ENST00000413442 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
USP54-202ENST00000413442 NDUFS5O43920 106 aa3.19□□□□□ -1.9
USP54-202ENST00000413442 LINC00846Q9NV44 126 aa3.19□□□□□ -1.9
USP54-202ENST00000413442 C7orf65Q6ZTY9 151 aa3.18□□□□□ -1.9
USP54-202ENST00000413442 HCG22E2RYF7 251 aa3.17□□□□□ -1.9
USP54-202ENST00000413442 KRTAP19-4Q3LI73 84 aa3.17□□□□□ -1.9
USP54-202ENST00000413442 ETDBQ3ZM63 59 aa3.17□□□□□ -1.9
USP54-202ENST00000413442 FAM240AA0A1B0GVK7 77 aa3.16□□□□□ -1.9
USP54-202ENST00000413442 KRTAP9-8Q9BYQ0 159 aa3.16□□□□□ -1.9
USP54-202ENST00000413442 H1FX-AS1Q4G0G2 97 aa3.15□□□□□ -1.91
USP54-202ENST00000413442 CRCT1Q9UGL9 99 aa3.15□□□□□ -1.91
USP54-202ENST00000413442 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
USP54-202ENST00000413442 ATP5EP2Q5VTU8 51 aa3.14□□□□□ -1.91
USP54-202ENST00000413442 PCP4P48539 62 aa3.13□□□□□ -1.91
USP54-202ENST00000413442 LCE5AQ5TCM9 118 aa3.13□□□□□ -1.91
USP54-202ENST00000413442 Q5W150 140 aa3.12□□□□□ -1.91
USP54-202ENST00000413442 IGKV2D-30A0A075B6S6 120 aa3.11□□□□□ -1.91
USP54-202ENST00000413442 IGKV2-30P06310 120 aa3.11□□□□□ -1.91
USP54-202ENST00000413442 Q8N9L7 120 aa3.11□□□□□ -1.91
USP54-202ENST00000413442 J3QR89 54 aa3.09□□□□□ -1.91
USP54-202ENST00000413442 MT2AP02795 61 aa3.09□□□□□ -1.91
USP54-202ENST00000413442 KRTAP10-10P60014 251 aa3.09□□□□□ -1.91
USP54-202ENST00000413442 FSIP2Q5CZC0 6907 aa3.08□□□□□ -1.92
USP54-202ENST00000413442 LOC101927531A0A1B0GV80 90 aa3.08□□□□□ -1.92
USP54-202ENST00000413442 ATOX1O00244 68 aa3.08□□□□□ -1.92
USP54-202ENST00000413442 LINC00643Q86TS7 51 aa3.08□□□□□ -1.92
USP54-202ENST00000413442 UQCRQO14949 82 aa3.07□□□□□ -1.92
USP54-202ENST00000413442 TRAV22A0A0B4J277 110 aa3.06□□□□□ -1.92
USP54-202ENST00000413442 C4orf26Q17RF5 130 aa3.06□□□□□ -1.92
USP54-202ENST00000413442 CSAG1Q6PB30 78 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms