RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 LINC00313P59037 77 aa3.32□□□□□ -1.88
EPHA4-202ENST00000409854 A0A1W2PNM2 257 aa3.32□□□□□ -1.88
EPHA4-202ENST00000409854 PSPHP1O15172 72 aa3.32□□□□□ -1.88
EPHA4-202ENST00000409854 IGFL1Q6UW32 110 aa3.32□□□□□ -1.88
EPHA4-202ENST00000409854 CDC42SE1Q9NRR8 79 aa3.32□□□□□ -1.88
EPHA4-202ENST00000409854 Q8NBF4 154 aa3.31□□□□□ -1.88
EPHA4-202ENST00000409854 SNURFQ9Y675 71 aa3.31□□□□□ -1.88
EPHA4-202ENST00000409854 Q75L30 129 aa3.31□□□□□ -1.88
EPHA4-202ENST00000409854 RPL37AP61513 92 aaKnown RBP3.31□□□□□ -1.88
EPHA4-202ENST00000409854 APOBP04114 4563 aaKnown RBP3.3□□□□□ -1.88
EPHA4-202ENST00000409854 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
EPHA4-202ENST00000409854 NREPQ16612 68 aa3.3□□□□□ -1.88
EPHA4-202ENST00000409854 HCG22E2RYF7 251 aa3.29□□□□□ -1.88
EPHA4-202ENST00000409854 NDUFB1O75438 58 aa3.29□□□□□ -1.88
EPHA4-202ENST00000409854 KRTAP10-4P60372 401 aaPredicted RBP3.29□□□□□ -1.88
EPHA4-202ENST00000409854 Q5VV11 94 aa3.29□□□□□ -1.88
EPHA4-202ENST00000409854 VPS13BQ7Z7G8 4022 aa3.28□□□□□ -1.88
EPHA4-202ENST00000409854 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
EPHA4-202ENST00000409854 Q8N9L7 120 aa3.28□□□□□ -1.88
EPHA4-202ENST00000409854 A0A0G2JQZ4 141 aa3.28□□□□□ -1.88
EPHA4-202ENST00000409854 LOC101927531A0A1B0GV80 90 aa3.28□□□□□ -1.88
EPHA4-202ENST00000409854 KRTAP1-4P0C5Y4 121 aa3.28□□□□□ -1.88
EPHA4-202ENST00000409854 IGLV9-49A0A0B4J1Y8 123 aa3.27□□□□□ -1.89
EPHA4-202ENST00000409854 SPINK6Q6UWN8 80 aa3.27□□□□□ -1.89
EPHA4-202ENST00000409854 ANAPC11Q9NYG5 84 aa3.27□□□□□ -1.89
EPHA4-202ENST00000409854 CDK2AP2O75956 126 aa3.27□□□□□ -1.89
EPHA4-202ENST00000409854 PLA2G1BP04054 148 aaKnown RBP3.27□□□□□ -1.89
EPHA4-202ENST00000409854 MOBPQ13875 183 aa3.27□□□□□ -1.89
EPHA4-202ENST00000409854 C1orf64Q8NEQ6 169 aa3.27□□□□□ -1.89
EPHA4-202ENST00000409854 PKHD1L1Q86WI1 4243 aa3.26□□□□□ -1.89
EPHA4-202ENST00000409854 CHKB-CPT1BH3BT56 60 aa3.26□□□□□ -1.89
EPHA4-202ENST00000409854 SMR3BP02814 79 aaPredicted RBP3.26□□□□□ -1.89
EPHA4-202ENST00000409854 IGHV6-1A0A0B4J1U7 121 aa3.25□□□□□ -1.89
EPHA4-202ENST00000409854 BPY2O14599 106 aa3.25□□□□□ -1.89
EPHA4-202ENST00000409854 KRTAP13-2Q52LG2 175 aa3.25□□□□□ -1.89
EPHA4-202ENST00000409854 DEFB116Q30KQ4 102 aa3.25□□□□□ -1.89
EPHA4-202ENST00000409854 LCE2AQ5TA79 106 aaPredicted RBP3.25□□□□□ -1.89
EPHA4-202ENST00000409854 SSBP3-AS1Q7Z2R9 100 aa3.25□□□□□ -1.89
EPHA4-202ENST00000409854 LCE2CQ5TA81 110 aa3.25□□□□□ -1.89
EPHA4-202ENST00000409854 SPTSSBQ8NFR3 76 aa3.25□□□□□ -1.89
EPHA4-202ENST00000409854 OCR1Q9BZK8 76 aa3.25□□□□□ -1.89
EPHA4-202ENST00000409854 A0A087WSZ3 146 aa3.24□□□□□ -1.89
EPHA4-202ENST00000409854 CASC2Q6XLA1 102 aa3.24□□□□□ -1.89
EPHA4-202ENST00000409854 SPANXA2-OT1Q8N9U9 137 aa3.23□□□□□ -1.89
EPHA4-202ENST00000409854 RYR1P21817 5038 aa3.23□□□□□ -1.89
EPHA4-202ENST00000409854 LINC00472Q9H8W2 130 aa3.23□□□□□ -1.89
EPHA4-202ENST00000409854 A6NED7 52 aa3.22□□□□□ -1.89
EPHA4-202ENST00000409854 DSCR10P59022 87 aa3.22□□□□□ -1.89
EPHA4-202ENST00000409854 Q8N9P0 234 aaPredicted RBP3.22□□□□□ -1.89
EPHA4-202ENST00000409854 Q96NJ1 140 aa3.22□□□□□ -1.89
EPHA4-202ENST00000409854 HSPG2P98160 4391 aa3.22□□□□□ -1.89
EPHA4-202ENST00000409854 IGKV4-1P06312 121 aa3.21□□□□□ -1.89
EPHA4-202ENST00000409854 ZCCHC13Q8WW36 166 aaKnown RBP3.21□□□□□ -1.89
EPHA4-202ENST00000409854 FAM229AH3BQW9 127 aa3.21□□□□□ -1.9
EPHA4-202ENST00000409854 FAT1Q14517 4588 aa3.2□□□□□ -1.9
EPHA4-202ENST00000409854 Q5VSD8 79 aa3.2□□□□□ -1.9
EPHA4-202ENST00000409854 KRTAP17-1Q9BYP8 105 aa3.2□□□□□ -1.9
EPHA4-202ENST00000409854 EPPK1P58107 5090 aaKnown RBP3.2□□□□□ -1.9
EPHA4-202ENST00000409854 H3BPC8 53 aa3.2□□□□□ -1.9
EPHA4-202ENST00000409854 TYMSOSQ8TAI1 123 aa3.19□□□□□ -1.9
EPHA4-202ENST00000409854 K7EQZ3 153 aa3.19□□□□□ -1.9
EPHA4-202ENST00000409854 PRR4Q16378 134 aa3.19□□□□□ -1.9
EPHA4-202ENST00000409854 RETNLBQ9BQ08 111 aa3.19□□□□□ -1.9
EPHA4-202ENST00000409854 PRR15LQ9BU68 103 aa3.19□□□□□ -1.9
EPHA4-202ENST00000409854 A8MWP4 228 aa3.18□□□□□ -1.9
EPHA4-202ENST00000409854 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
EPHA4-202ENST00000409854 WFDC13Q8IUB5 93 aa3.18□□□□□ -1.9
EPHA4-202ENST00000409854 Q8N1X5 172 aa3.18□□□□□ -1.9
EPHA4-202ENST00000409854 SPINK1P00995 79 aa3.17□□□□□ -1.9
EPHA4-202ENST00000409854 LINC00208Q96KT6 92 aa3.17□□□□□ -1.9
EPHA4-202ENST00000409854 LINC01558Q9Y6Z2 57 aa3.17□□□□□ -1.9
EPHA4-202ENST00000409854 KIAA1109Q2LD37 5005 aa3.17□□□□□ -1.9
EPHA4-202ENST00000409854 SPAG11AQ6PDA7 123 aa3.16□□□□□ -1.9
EPHA4-202ENST00000409854 LINC00304Q8N9R0 145 aa3.16□□□□□ -1.9
EPHA4-202ENST00000409854 KRTAP29-1A8MX34 341 aaPredicted RBP3.15□□□□□ -1.91
EPHA4-202ENST00000409854 MMP24-AS1A0A0U1RRL7 71 aa3.14□□□□□ -1.91
EPHA4-202ENST00000409854 A0A1B0GVX0 72 aa3.14□□□□□ -1.91
EPHA4-202ENST00000409854 KRTAP10-8P60410 259 aa3.14□□□□□ -1.91
EPHA4-202ENST00000409854 A8MU10 97 aa3.14□□□□□ -1.91
EPHA4-202ENST00000409854 C8orf17Q9NRJ1 99 aa3.13□□□□□ -1.91
EPHA4-202ENST00000409854 FAT3Q8TDW7 4589 aa3.13□□□□□ -1.91
EPHA4-202ENST00000409854 SEC61BP60468 96 aaKnown RBP3.12□□□□□ -1.91
EPHA4-202ENST00000409854 TNXBP22105 4242 aa3.12□□□□□ -1.91
EPHA4-202ENST00000409854 LORP23490 312 aaPredicted RBP3.11□□□□□ -1.91
EPHA4-202ENST00000409854 MT1HL1P0DM35 61 aa3.1□□□□□ -1.91
EPHA4-202ENST00000409854 LRP1Q07954 4544 aaKnown RBP3.1□□□□□ -1.91
EPHA4-202ENST00000409854 BIRC6Q9NR09 4857 aa3.09□□□□□ -1.91
EPHA4-202ENST00000409854 ROMO1P60602 79 aa3.09□□□□□ -1.91
EPHA4-202ENST00000409854 KRTAP4-5Q9BYR2 181 aa3.09□□□□□ -1.91
EPHA4-202ENST00000409854 FLG2Q5D862 2391 aaPredicted RBP3.09□□□□□ -1.92
EPHA4-202ENST00000409854 MRPL34Q9BQ48 92 aaKnown RBP3.09□□□□□ -1.92
EPHA4-202ENST00000409854 KRTAP16-1A8MUX0 517 aa3.08□□□□□ -1.92
EPHA4-202ENST00000409854 H0Y9P7 68 aa3.07□□□□□ -1.92
EPHA4-202ENST00000409854 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
EPHA4-202ENST00000409854 TP53AIP1Q9HCN2 124 aa3.06□□□□□ -1.92
EPHA4-202ENST00000409854 HERC2O95714 4834 aa3.06□□□□□ -1.92
EPHA4-202ENST00000409854 IGLV7-46A0A075B6I9 117 aa3.06□□□□□ -1.92
EPHA4-202ENST00000409854 PCOTHQ58A44 107 aa3.06□□□□□ -1.92
EPHA4-202ENST00000409854 COA5Q86WW8 74 aa3.05□□□□□ -1.92
EPHA4-202ENST00000409854 MYCBP2O75592 4640 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms