RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 LRP2P98164 4655 aa7.01□□□□□ -1.29
PMS1-204ENST00000409823 LINC00643Q86TS7 51 aa7□□□□□ -1.29
PMS1-204ENST00000409823 NOTCH2NLQ7Z3S9 236 aa6.99□□□□□ -1.29
PMS1-204ENST00000409823 A8MWP4 228 aa6.99□□□□□ -1.29
PMS1-204ENST00000409823 J3KT08 172 aa6.99□□□□□ -1.29
PMS1-204ENST00000409823 NDUFB1O75438 58 aa6.97□□□□□ -1.29
PMS1-204ENST00000409823 HIST1H4AP62805 103 aaKnown RBP6.97□□□□□ -1.29
PMS1-204ENST00000409823 MT-ATP8P03928 68 aa6.97□□□□□ -1.29
PMS1-204ENST00000409823 CXCL6P80162 114 aa6.97□□□□□ -1.29
PMS1-204ENST00000409823 A0A1B0GVX0 72 aa6.96□□□□□ -1.3
PMS1-204ENST00000409823 FP248Q71RG6 208 aaPredicted RBP6.96□□□□□ -1.3
PMS1-204ENST00000409823 PRR15Q8IV56 129 aa6.96□□□□□ -1.3
PMS1-204ENST00000409823 A0A087WVE0 104 aa6.94□□□□□ -1.3
PMS1-204ENST00000409823 ATP5EP2Q5VTU8 51 aa6.92□□□□□ -1.3
PMS1-204ENST00000409823 LINC00313P59037 77 aa6.92□□□□□ -1.3
PMS1-204ENST00000409823 KRTAP13-3Q3SY46 172 aa6.91□□□□□ -1.3
PMS1-204ENST00000409823 WFDC13Q8IUB5 93 aa6.91□□□□□ -1.3
PMS1-204ENST00000409823 C8orf17Q9NRJ1 99 aa6.9□□□□□ -1.3
PMS1-204ENST00000409823 MMP24-AS1A0A0U1RRL7 71 aa6.88□□□□□ -1.31
PMS1-204ENST00000409823 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
PMS1-204ENST00000409823 hDV103S1A0JD37 113 aa6.86□□□□□ -1.31
PMS1-204ENST00000409823 HCG22E2RYF7 251 aa6.86□□□□□ -1.31
PMS1-204ENST00000409823 CASC2Q6XLA1 102 aa6.86□□□□□ -1.31
PMS1-204ENST00000409823 C8orf87E5RJ46 101 aa6.85□□□□□ -1.31
PMS1-204ENST00000409823 XP32Q5T750 250 aa6.85□□□□□ -1.31
PMS1-204ENST00000409823 UBR4Q5T4S7 5183 aa6.85□□□□□ -1.31
PMS1-204ENST00000409823 KRTAP16-1A8MUX0 517 aa6.84□□□□□ -1.31
PMS1-204ENST00000409823 MUC2Q02817 5179 aa6.83□□□□□ -1.32
PMS1-204ENST00000409823 NDUFS5O43920 106 aa6.82□□□□□ -1.32
PMS1-204ENST00000409823 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
PMS1-204ENST00000409823 IMUPQ9GZP8 106 aa6.8□□□□□ -1.32
PMS1-204ENST00000409823 TMEM254Q8TBM7 123 aa6.79□□□□□ -1.32
PMS1-204ENST00000409823 FAM236AA0A1B0GUQ0 79 aa6.78□□□□□ -1.32
PMS1-204ENST00000409823 FAM236BA0A1B0GV22 79 aa6.78□□□□□ -1.32
PMS1-204ENST00000409823 C20orf166-AS1Q96NR2 134 aa6.76□□□□□ -1.33
PMS1-204ENST00000409823 RNF213Q63HN8 5207 aa6.76□□□□□ -1.33
PMS1-204ENST00000409823 SCGB1A1P11684 91 aa6.75□□□□□ -1.33
PMS1-204ENST00000409823 Q8N9P0 234 aaPredicted RBP6.75□□□□□ -1.33
PMS1-204ENST00000409823 A8MUU9 505 aa6.74□□□□□ -1.33
PMS1-204ENST00000409823 Q75L30 129 aa6.74□□□□□ -1.33
PMS1-204ENST00000409823 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
PMS1-204ENST00000409823 PCOTHQ58A44 107 aa6.71□□□□□ -1.33
PMS1-204ENST00000409823 ATP11AUNQ6ZP68 121 aa6.7□□□□□ -1.34
PMS1-204ENST00000409823 Q5W150 140 aa6.7□□□□□ -1.34
PMS1-204ENST00000409823 ZCCHC13Q8WW36 166 aaKnown RBP6.67□□□□□ -1.34
PMS1-204ENST00000409823 OCR1Q9BZK8 76 aa6.66□□□□□ -1.34
PMS1-204ENST00000409823 MUC17Q685J3 4493 aa6.64□□□□□ -1.35
PMS1-204ENST00000409823 TP53AIP1Q9HCN2 124 aa6.64□□□□□ -1.35
PMS1-204ENST00000409823 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
PMS1-204ENST00000409823 ATOX1O00244 68 aa6.62□□□□□ -1.35
PMS1-204ENST00000409823 TRAV22A0A0B4J277 110 aa6.6□□□□□ -1.35
PMS1-204ENST00000409823 UQCRQO14949 82 aa6.6□□□□□ -1.35
PMS1-204ENST00000409823 KRTAP4-1Q9BYQ7 146 aa6.6□□□□□ -1.35
PMS1-204ENST00000409823 IGKV2D-30A0A075B6S6 120 aa6.59□□□□□ -1.35
PMS1-204ENST00000409823 IGKV2-30P06310 120 aa6.59□□□□□ -1.35
PMS1-204ENST00000409823 H0Y9P7 68 aa6.59□□□□□ -1.35
PMS1-204ENST00000409823 TRAV7A0A075B6U4 112 aa6.57□□□□□ -1.36
PMS1-204ENST00000409823 SPINK7P58062 85 aa6.56□□□□□ -1.36
PMS1-204ENST00000409823 LINC00208Q96KT6 92 aa6.56□□□□□ -1.36
PMS1-204ENST00000409823 SMIM20Q8N5G0 67 aa6.55□□□□□ -1.36
PMS1-204ENST00000409823 ANAPC13Q9BS18 74 aa6.55□□□□□ -1.36
PMS1-204ENST00000409823 SERP2Q8N6R1 65 aa6.54□□□□□ -1.36
PMS1-204ENST00000409823 C5orf47Q569G3 176 aa6.54□□□□□ -1.36
PMS1-204ENST00000409823 MP68P56378 58 aa6.53□□□□□ -1.36
PMS1-204ENST00000409823 C1orf64Q8NEQ6 169 aa6.53□□□□□ -1.36
PMS1-204ENST00000409823 FAT4Q6V0I7 4981 aa6.53□□□□□ -1.36
PMS1-204ENST00000409823 SNURFQ9Y675 71 aa6.51□□□□□ -1.37
PMS1-204ENST00000409823 C20orf197Q8N268 126 aa6.5□□□□□ -1.37
PMS1-204ENST00000409823 C7orf65Q6ZTY9 151 aa6.5□□□□□ -1.37
PMS1-204ENST00000409823 CYP4F30PQ9H0H9 118 aa6.49□□□□□ -1.37
PMS1-204ENST00000409823 COX7CP15954 63 aa6.48□□□□□ -1.37
PMS1-204ENST00000409823 LOC101927531A0A1B0GV80 90 aa6.47□□□□□ -1.37
PMS1-204ENST00000409823 KLKP1Q107X0 134 aa6.45□□□□□ -1.38
PMS1-204ENST00000409823 A0A0U1RQV1 116 aa6.45□□□□□ -1.38
PMS1-204ENST00000409823 C4orf26Q17RF5 130 aa6.45□□□□□ -1.38
PMS1-204ENST00000409823 HRES1P13985 223 aa6.44□□□□□ -1.38
PMS1-204ENST00000409823 CCDC179H3BU77 68 aa6.43□□□□□ -1.38
PMS1-204ENST00000409823 CYSTM1Q9H1C7 97 aa6.42□□□□□ -1.38
PMS1-204ENST00000409823 H3BPC8 53 aa6.41□□□□□ -1.38
PMS1-204ENST00000409823 MPLKIPQ8TAP9 179 aa6.36□□□□□ -1.39
PMS1-204ENST00000409823 FAM236DA0A1B0GTK5 79 aa6.35□□□□□ -1.39
PMS1-204ENST00000409823 FAM236CP0DP71 79 aa6.35□□□□□ -1.39
PMS1-204ENST00000409823 RBM12B-AS1Q9P1G2 102 aa6.35□□□□□ -1.39
PMS1-204ENST00000409823 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
PMS1-204ENST00000409823 PCP4P48539 62 aa6.35□□□□□ -1.39
PMS1-204ENST00000409823 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
PMS1-204ENST00000409823 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
PMS1-204ENST00000409823 H7BZZ5 65 aa6.3□□□□□ -1.4
PMS1-204ENST00000409823 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
PMS1-204ENST00000409823 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
PMS1-204ENST00000409823 NDUFC1O43677 76 aa6.24□□□□□ -1.41
PMS1-204ENST00000409823 H1FX-AS1Q4G0G2 97 aa6.23□□□□□ -1.41
PMS1-204ENST00000409823 DMAC1Q96GE9 116 aa6.2□□□□□ -1.42
PMS1-204ENST00000409823 SPANXA2-OT1Q8N9U9 137 aa6.2□□□□□ -1.42
PMS1-204ENST00000409823 MT1HP80294 61 aa6.18□□□□□ -1.42
PMS1-204ENST00000409823 A8MUN3 132 aa6.17□□□□□ -1.42
PMS1-204ENST00000409823 LCA10Q71F78 164 aa6.16□□□□□ -1.42
PMS1-204ENST00000409823 M0R2T5 61 aa6.16□□□□□ -1.42
PMS1-204ENST00000409823 S4R3F8 94 aa6.15□□□□□ -1.42
PMS1-204ENST00000409823 ACYP2P14621 99 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms